RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 C2orf91Q6ZV80 131 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 CLVS1Q8IUQ0 354 aaPredicted RBP1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 PFN4Q8NHR9 129 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 TEX37Q96LM6 180 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 MAP1LC3BQ9GZQ8 125 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 CCDC90BQ9GZT6 254 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 C6orf62Q9GZU0 229 aaPredicted RBP1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 SPANXCQ9NY87 97 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 LAMTOR3Q9UHA4 124 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 OR52A1Q9UKL2 312 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 SSR3Q9UNL2 185 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 HSPB11Q9Y547 144 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 RBM7Q9Y580 266 aaKnown RBP1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 A0A087WX48 190 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 A0A1W2PQD3 144 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 TMEM212A6NML5 194 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 FABP5P3A8MUU1 101 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 G3V2T6 193 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 I3L521 148 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 M0R378 163 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 ZNF73O43830 326 aaPredicted RBP1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 GADD45GO95257 159 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 CDS2O95674 445 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 IGHV3-7P01780 117 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 RNASE4P34096 147 aaKnown RBP1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 CSN1S1P47710 185 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 SERPINB10P48595 397 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 PSG9Q00887 426 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 KLRD1Q13241 179 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 ZNF141Q15928 474 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 TMEM128Q5BJH2 165 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 SPANXN3Q5MJ09 141 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 AADACL3Q5VUY0 350 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 DCUN1D2Q6PH85 259 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 PHF5AQ7RTV0 110 aaKnown RBP1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 LHFPL1Q86WI0 220 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 ANGPTL5Q86XS5 388 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 UBE2DNLQ8IWF7 75 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 OR13D1Q8NGV5 346 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 SLC25A40Q8TBP6 338 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 SKA2Q8WVK7 121 aaPredicted RBP1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 ADAT3Q96EY9 351 aaPredicted RBP1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 GPER1Q99527 375 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 MGLLQ99685 303 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 DUSP21Q9H596 190 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 BATF3Q9NR55 127 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 TXNL4BQ9NX01 149 aaKnown RBP1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 SS18L2Q9UHA2 77 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 JPT1Q9UK76 154 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
CKS1BP2-201ENST00000497342 TRAV10A0A0B4J240 114 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 IGKV1-9A0A0C4DH69 117 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 MUC21A0A0G2JKD1 596 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 MUC21A0A140T8X8 626 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 PVALEFA0A1B0GWK0 134 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 A0A1B0GX51 115 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 A0A1W2PNM2 257 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 ODF3BA8MYP8 253 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 CCL22O00626 93 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 HMGB3O15347 200 aaKnown RBP1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 GNRH2O43555 120 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 OR1I1O60431 355 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 DHFRP00374 187 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 NFYAP23511 347 aaPredicted RBP1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 SRIP30626 198 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 S100A7P31151 101 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 GTF2A1P52655 376 aaPredicted RBP1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 FXYD2P54710 66 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 EMP1P54849 157 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 YPEL3P61236 119 aaPredicted RBP1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 LTC4SQ16873 150 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 PABPC1L2AQ5JQF8 200 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 LCE1EQ5T753 118 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 PRR9Q5T870 116 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 HCP5Q6MZN7 132 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 NOXRED1Q6NXP6 359 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 IGFL1Q6UW32 110 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 LYZL1Q6UWQ5 148 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 PRR15Q8IV56 129 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 OR9Q1Q8NGQ5 310 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 THEM6Q8WUY1 208 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 CANT1Q8WVQ1 401 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 C4orf3Q8WVX3 66 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 OR4C12Q96R67 309 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 HSPB9Q9BQS6 159 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 Q9BRP9 147 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 SNRNP25Q9BV90 132 aaKnown RBP1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 HIGD2AQ9BW72 106 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 PRO2289Q9P1D8 64 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 NUBP2Q9Y5Y2 271 aa1.28□□□□□ -2.2
CKS1BP2-201ENST00000497342 TRAV5A0A0B4J249 113 aa1.27□□□□□ -2.21
CKS1BP2-201ENST00000497342 DUXBA0A1W2PPF3 345 aa1.27□□□□□ -2.21
CKS1BP2-201ENST00000497342 GGT3PA6NGU5 568 aa1.27□□□□□ -2.21
CKS1BP2-201ENST00000497342 RIIAD1A6NNX1 92 aa1.27□□□□□ -2.21
CKS1BP2-201ENST00000497342 UBE2L6O14933 153 aa1.27□□□□□ -2.21
CKS1BP2-201ENST00000497342 PFDN1O60925 122 aa1.27□□□□□ -2.21
CKS1BP2-201ENST00000497342 IGKV1-16P04430 117 aa1.27□□□□□ -2.21
CKS1BP2-201ENST00000497342 CASP1P29466 404 aa1.27□□□□□ -2.21
CKS1BP2-201ENST00000497342 CD200P41217 278 aa1.27□□□□□ -2.21
CKS1BP2-201ENST00000497342 DYNLT3P51808 116 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms