RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 FBLL1A6NHQ2 334 aaKnown RBP11.31□□□□□ -0.6
TRAPPC3-207ENST00000497251 GGTLC3B5MD39 225 aa11.31□□□□□ -0.6
TRAPPC3-207ENST00000497251 SUMO1P63165 101 aaKnown RBP11.31□□□□□ -0.6
TRAPPC3-207ENST00000497251 LAGE3Q14657 143 aa11.31□□□□□ -0.6
TRAPPC3-207ENST00000497251 PTH2Q96A98 100 aa11.31□□□□□ -0.6
TRAPPC3-207ENST00000497251 NDFIP1Q9BT67 221 aa11.31□□□□□ -0.6
TRAPPC3-207ENST00000497251 TM2D2Q9BX73 214 aa11.31□□□□□ -0.6
TRAPPC3-207ENST00000497251 A0A0D9SG52 128 aa11.3□□□□□ -0.6
TRAPPC3-207ENST00000497251 GNRH2O43555 120 aa11.3□□□□□ -0.6
TRAPPC3-207ENST00000497251 RHOHQ15669 191 aa11.3□□□□□ -0.6
TRAPPC3-207ENST00000497251 Q6ZSN1 163 aa11.3□□□□□ -0.6
TRAPPC3-207ENST00000497251 OR11H4Q8NGC9 324 aa11.3□□□□□ -0.6
TRAPPC3-207ENST00000497251 TVP23CQ96ET8 276 aa11.3□□□□□ -0.6
TRAPPC3-207ENST00000497251 NKX6-2Q9C056 277 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC3-207ENST00000497251 EPDR1Q9UM22 224 aa11.3□□□□□ -0.6
TRAPPC3-207ENST00000497251 TYMSP04818 313 aa11.29□□□□□ -0.6
TRAPPC3-207ENST00000497251 ZNF876PQ49A33 203 aa11.29□□□□□ -0.6
TRAPPC3-207ENST00000497251 LELP1Q5T871 98 aa11.29□□□□□ -0.6
TRAPPC3-207ENST00000497251 Q8N814 137 aa11.29□□□□□ -0.6
TRAPPC3-207ENST00000497251 CYB561D1Q8N8Q1 229 aa11.29□□□□□ -0.6
TRAPPC3-207ENST00000497251 TMEM75Q8N9X5 138 aa11.29□□□□□ -0.6
TRAPPC3-207ENST00000497251 SEC11BP0C7V7 166 aa11.28□□□□□ -0.6
TRAPPC3-207ENST00000497251 MGST1P10620 155 aaKnown RBP11.28□□□□□ -0.6
TRAPPC3-207ENST00000497251 OR10J3Q5JRS4 329 aa11.28□□□□□ -0.6
TRAPPC3-207ENST00000497251 SLC25A29Q8N8R3 303 aa11.28□□□□□ -0.6
TRAPPC3-207ENST00000497251 MYCBP2O75592 4640 aa11.27□□□□□ -0.6
TRAPPC3-207ENST00000497251 KANTRA0A1W2PQU2 76 aa11.27□□□□□ -0.61
TRAPPC3-207ENST00000497251 MAP1LC3B2A6NCE7 125 aa11.27□□□□□ -0.61
TRAPPC3-207ENST00000497251 UMAD1C9J7I0 102 aa11.27□□□□□ -0.61
TRAPPC3-207ENST00000497251 F6UZH7 168 aa11.27□□□□□ -0.61
TRAPPC3-207ENST00000497251 RS1O15537 224 aa11.27□□□□□ -0.61
TRAPPC3-207ENST00000497251 BCL2L11O43521 198 aa11.27□□□□□ -0.61
TRAPPC3-207ENST00000497251 IGLV2-11P01706 119 aa11.27□□□□□ -0.61
TRAPPC3-207ENST00000497251 SMR3BP02814 79 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC3-207ENST00000497251 EIF5AP63241 154 aaKnown RBP11.27□□□□□ -0.61
TRAPPC3-207ENST00000497251 FLI1Q01543 452 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC3-207ENST00000497251 PIK3CD-AS1Q5SR53 167 aa11.27□□□□□ -0.61
TRAPPC3-207ENST00000497251 MAP1LC3BQ9GZQ8 125 aa11.27□□□□□ -0.61
TRAPPC3-207ENST00000497251 GTSF1LQ9H1H1 148 aa11.27□□□□□ -0.61
TRAPPC3-207ENST00000497251 PSG8Q9UQ74 426 aa11.27□□□□□ -0.61
TRAPPC3-207ENST00000497251 LOC100131303A0A0U1RQF7 123 aa11.26□□□□□ -0.61
TRAPPC3-207ENST00000497251 FGF8P55075 233 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC3-207ENST00000497251 SAPCD1Q5SSQ6 148 aa11.26□□□□□ -0.61
TRAPPC3-207ENST00000497251 CFAP126Q5VTH2 177 aa11.26□□□□□ -0.61
TRAPPC3-207ENST00000497251 STOML3Q8TAV4 291 aa11.26□□□□□ -0.61
TRAPPC3-207ENST00000497251 SGK494Q96LW2 274 aa11.26□□□□□ -0.61
TRAPPC3-207ENST00000497251 ZNF471Q9BX82 626 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC3-207ENST00000497251 TRAV8-3A0A0A6YYJ7 113 aa11.25□□□□□ -0.61
TRAPPC3-207ENST00000497251 FAM74A7A6NL05 159 aa11.25□□□□□ -0.61
TRAPPC3-207ENST00000497251 ZFP69Q49AA0 526 aa11.25□□□□□ -0.61
TRAPPC3-207ENST00000497251 TOR2AQ5JU69 321 aa11.25□□□□□ -0.61
TRAPPC3-207ENST00000497251 ATP6V0E2Q8NHE4 81 aa11.25□□□□□ -0.61
TRAPPC3-207ENST00000497251 HIST1H2BAQ96A08 127 aa11.25□□□□□ -0.61
TRAPPC3-207ENST00000497251 COX11Q9Y6N1 276 aa11.25□□□□□ -0.61
TRAPPC3-207ENST00000497251 ARL2-SNX15V9GYD0 113 aa11.25□□□□□ -0.61
TRAPPC3-207ENST00000497251 IFNA7P01567 189 aa11.24□□□□□ -0.61
TRAPPC3-207ENST00000497251 PLA2G1BP04054 148 aaKnown RBP11.24□□□□□ -0.61
TRAPPC3-207ENST00000497251 UBE2G2P60604 165 aa11.24□□□□□ -0.61
TRAPPC3-207ENST00000497251 SMUG1Q53HV7 270 aa11.24□□□□□ -0.61
TRAPPC3-207ENST00000497251 DPPA3Q6W0C5 159 aa11.24□□□□□ -0.61
TRAPPC3-207ENST00000497251 ZFP2Q6ZN57 461 aa11.24□□□□□ -0.61
TRAPPC3-207ENST00000497251 PRNTQ86SH4 94 aa11.24□□□□□ -0.61
TRAPPC3-207ENST00000497251 TCEAL7Q9BRU2 100 aa11.24□□□□□ -0.61
TRAPPC3-207ENST00000497251 PEX7O00628 323 aa11.23□□□□□ -0.61
TRAPPC3-207ENST00000497251 PFDN1O60925 122 aa11.23□□□□□ -0.61
TRAPPC3-207ENST00000497251 GCGP01275 180 aa11.23□□□□□ -0.61
TRAPPC3-207ENST00000497251 FHITP49789 147 aa11.23□□□□□ -0.61
TRAPPC3-207ENST00000497251 TMUB2Q71RG4 321 aa11.23□□□□□ -0.61
TRAPPC3-207ENST00000497251 TCTE3Q8IZS6 198 aa11.23□□□□□ -0.61
TRAPPC3-207ENST00000497251 C9orf85Q96MD7 179 aa11.23□□□□□ -0.61
TRAPPC3-207ENST00000497251 A0A087WWC5 75 aa11.22□□□□□ -0.61
TRAPPC3-207ENST00000497251 TPT1P13693 172 aaKnown RBP11.22□□□□□ -0.61
TRAPPC3-207ENST00000497251 ZNF80P51504 273 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC3-207ENST00000497251 MBD3L1Q8WWY6 194 aa11.22□□□□□ -0.61
TRAPPC3-207ENST00000497251 Q9HAA7 133 aa11.22□□□□□ -0.61
TRAPPC3-207ENST00000497251 A8MWV9 139 aa11.21□□□□□ -0.61
TRAPPC3-207ENST00000497251 Q6ZNX1 250 aa11.21□□□□□ -0.61
TRAPPC3-207ENST00000497251 FAM213BQ8TBF2 198 aa11.21□□□□□ -0.61
TRAPPC3-207ENST00000497251 TRAV34A0A0B4J273 112 aa11.2□□□□□ -0.62
TRAPPC3-207ENST00000497251 J3QL48 77 aa11.2□□□□□ -0.62
TRAPPC3-207ENST00000497251 LGALSLQ3ZCW2 172 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC3-207ENST00000497251 Q6ZSA8 131 aa11.2□□□□□ -0.62
TRAPPC3-207ENST00000497251 Q86TA4 180 aa11.2□□□□□ -0.62
TRAPPC3-207ENST00000497251 SFT2D1Q8WV19 159 aa11.2□□□□□ -0.62
TRAPPC3-207ENST00000497251 LINC00479Q96M42 142 aa11.2□□□□□ -0.62
TRAPPC3-207ENST00000497251 IGHV3-30P01768 117 aa11.19□□□□□ -0.62
TRAPPC3-207ENST00000497251 IGHV3-33P01772 117 aa11.19□□□□□ -0.62
TRAPPC3-207ENST00000497251 IGHV3-30-3P0DP02 117 aa11.19□□□□□ -0.62
TRAPPC3-207ENST00000497251 IGHV3-30-5P0DP03 117 aa11.19□□□□□ -0.62
TRAPPC3-207ENST00000497251 ZNF506Q5JVG8 444 aa11.19□□□□□ -0.62
TRAPPC3-207ENST00000497251 COX8CQ7Z4L0 72 aa11.19□□□□□ -0.62
TRAPPC3-207ENST00000497251 RMI2Q96E14 147 aa11.19□□□□□ -0.62
TRAPPC3-207ENST00000497251 FMC1Q96HJ9 113 aa11.19□□□□□ -0.62
TRAPPC3-207ENST00000497251 C11orf21Q9P2W6 132 aa11.19□□□□□ -0.62
TRAPPC3-207ENST00000497251 ZFP30Q9Y2G7 519 aa11.19□□□□□ -0.62
TRAPPC3-207ENST00000497251 TRBV6-1A0A0K0K1D8 114 aa11.18□□□□□ -0.62
TRAPPC3-207ENST00000497251 PGPEP1LA6NFU8 196 aa11.18□□□□□ -0.62
TRAPPC3-207ENST00000497251 RNASE3P12724 160 aaKnown RBP11.18□□□□□ -0.62
TRAPPC3-207ENST00000497251 CST9LP1Q5W188 147 aa11.18□□□□□ -0.62
TRAPPC3-207ENST00000497251 EIF5AL1Q6IS14 154 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms