RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 Q6JHZ5 121 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 SOSTDC1Q6X4U4 206 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 C9orf47Q6ZRZ4 202 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 CLECL1Q8IZS7 167 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 NABP2Q9BQ15 211 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 PLXNB3Q9ULL4 1909 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 A0A0G2JMZ2 1700 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 LRRC37A2A6NM11 1700 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 LRRC37AA6NMS7 1700 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 PAPPA2Q9BXP8 1791 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 MYO7AQ13402 2215 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 PIGBOS1A0A0B4J2F0 54 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 IGKV1-16P04430 117 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 HMGN2P05204 90 aaKnown RBP2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 IFI6P09912 130 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 CCL4P13236 92 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 MRPL51Q4U2R6 128 aaKnown RBP2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 GDF5OSQ5U4N7 250 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 ZNF497Q6ZNH5 498 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 SCXQ7RTU7 201 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 DAND5Q8N907 189 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 DYNLRB2Q8TF09 96 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 IGLV5-45A0A087WSX0 123 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 SPINK4O60575 86 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 LINC00271P0C7V0 271 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 CD28P10747 220 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 PLGLAQ15195 96 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 LINC00242Q5T6M2 205 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 FAM216BQ8N7L0 139 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 SMCR5Q8TEV8 140 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 TMEM190Q8WZ59 177 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 PLA2G12AQ9BZM1 189 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 LINC00597Q9H2U6 94 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 PCDH15Q96QU1 1955 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 NCOA6Q14686 2063 aaPredicted RBP2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 SCN3AQ9NY46 2000 aa2.24□□□□□ -2.05
SNRNP48-202ENST00000496946 TMEM30CPA0ZSE6 113 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 K7EMI3 77 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 ZNF138P52744 262 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 REG3GQ6UW15 175 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 ZNF818PQ6ZRF7 136 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 VMO1Q7Z5L0 202 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 LINC00269Q8N2A0 174 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 TAC3Q9UHF0 121 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 TIAM2Q8IVF5 1701 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 AGRNO00468 2067 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 TRAV7A0A075B6U4 112 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 IGKV2D-26A0A0A0MRZ7 120 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 IGHV5-51A0A0C4DH38 117 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 F8WEM9 126 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 K7EQD1 137 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 PATE2Q6UY27 113 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 TIMM21Q9BVV7 248 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 BPESC1Q9GZL8 116 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 ZNF702PQ9H963 129 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 PRO1854Q9UHT4 67 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 THADAQ6YHU6 1953 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 PTPRSQ13332 1948 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 NUP98P52948 1817 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 CD163L1Q9NR16 1453 aa2.23□□□□□ -2.05
SNRNP48-202ENST00000496946 IGHV3OR16-12A0A075B7B8 117 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 TRGV8A0A0C4DH27 118 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 SAA1P0DJI8 122 aaPredicted RBP2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 SPINT3P49223 89 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 CRIP2P52943 208 aaPredicted RBP2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 Q0VFX4 171 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 C11orf71Q6IPW1 123 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 SFTA2Q6UW10 78 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 C18orf65Q6ZTR6 163 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 TMEM61Q8N0U2 210 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 PRO3102Q9H379 93 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 BCORQ6W2J9 1755 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 NRXN2Q9P2S2 1712 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 IGHV4-61A0A0C4DH41 118 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 IGHV4-59P01825 116 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 SYCNQ0VAF6 134 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 ATP5EP2Q5VTU8 51 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 LYZL2Q7Z4W2 148 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 DYNAPQ8N1N2 210 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 ZNF525Q8N782 197 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 ZNF580Q9UK33 172 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 UBE2D4Q9Y2X8 147 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 PKD1L2Q7Z442 2459 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 CACNA1AO00555 2505 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 TANC2Q9HCD6 1990 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 GREB1Q4ZG55 1949 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 UBR3Q6ZT12 1888 aa2.22□□□□□ -2.05
SNRNP48-202ENST00000496946 A0A087WYN8 130 aa2.21□□□□□ -2.05
SNRNP48-202ENST00000496946 IGLV3-32A0A0A0MS00 114 aa2.21□□□□□ -2.05
SNRNP48-202ENST00000496946 TMEM223A0PJW6 202 aa2.21□□□□□ -2.05
SNRNP48-202ENST00000496946 E7EUB6 86 aa2.21□□□□□ -2.05
SNRNP48-202ENST00000496946 H7C423 109 aa2.21□□□□□ -2.05
SNRNP48-202ENST00000496946 BSPH1Q075Z2 132 aa2.21□□□□□ -2.05
SNRNP48-202ENST00000496946 FAM229BQ4G0N7 80 aa2.21□□□□□ -2.05
SNRNP48-202ENST00000496946 SPANXN1Q5VSR9 72 aa2.21□□□□□ -2.05
SNRNP48-202ENST00000496946 FAM72BQ86X60 149 aa2.21□□□□□ -2.05
SNRNP48-202ENST00000496946 ABCA7Q8IZY2 2146 aa2.21□□□□□ -2.05
SNRNP48-202ENST00000496946 NDUFA12Q9UI09 145 aa2.21□□□□□ -2.05
SNRNP48-202ENST00000496946 PHLDA3Q9Y5J5 127 aa2.21□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms