RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 DMRTA1Q5VZB9 504 aa12.05□□□□□ -0.48
HLA-A-208ENST00000496081 OR10D4PQ8NGN7 298 aa12.05□□□□□ -0.48
HLA-A-208ENST00000496081 SPATA3Q8NHX4 192 aa12.05□□□□□ -0.48
HLA-A-208ENST00000496081 IGHV1OR15-1A0A075B7D0 117 aa12.05□□□□□ -0.48
HLA-A-208ENST00000496081 CMC4P56277 68 aaPredicted RBP12.05□□□□□ -0.48
HLA-A-208ENST00000496081 KRTAP24-1Q3LI83 254 aa12.05□□□□□ -0.48
HLA-A-208ENST00000496081 MRPL51Q4U2R6 128 aaKnown RBP12.05□□□□□ -0.48
HLA-A-208ENST00000496081 PACRGQ96M98 296 aaPredicted RBP12.05□□□□□ -0.48
HLA-A-208ENST00000496081 EVI2AP22794 236 aa12.04□□□□□ -0.48
HLA-A-208ENST00000496081 TMEM18Q96B42 140 aa12.04□□□□□ -0.48
HLA-A-208ENST00000496081 RNF185Q96GF1 192 aa12.04□□□□□ -0.48
HLA-A-208ENST00000496081 PHLDA3Q9Y5J5 127 aa12.04□□□□□ -0.48
HLA-A-208ENST00000496081 U3KQK5 164 aa12.04□□□□□ -0.48
HLA-A-208ENST00000496081 VWFP04275 2813 aa12.04□□□□□ -0.48
HLA-A-208ENST00000496081 D6R8Y8 96 aa12.03□□□□□ -0.48
HLA-A-208ENST00000496081 SMIM6P0DI80 62 aa12.03□□□□□ -0.48
HLA-A-208ENST00000496081 RAB4AP20338 218 aa12.03□□□□□ -0.48
HLA-A-208ENST00000496081 STHQ8IWL8 128 aa12.03□□□□□ -0.48
HLA-A-208ENST00000496081 FAM110AQ9BQ89 295 aa12.03□□□□□ -0.48
HLA-A-208ENST00000496081 C19orf73Q9NVV2 129 aa12.03□□□□□ -0.48
HLA-A-208ENST00000496081 IGHV3-16A0A0C4DH30 117 aa12.02□□□□□ -0.48
HLA-A-208ENST00000496081 M0R381 172 aa12.02□□□□□ -0.48
HLA-A-208ENST00000496081 TRPT1Q86TN4 253 aaKnown RBP12.02□□□□□ -0.48
HLA-A-208ENST00000496081 Q8N1Y9 231 aa12.02□□□□□ -0.48
HLA-A-208ENST00000496081 C12orf57Q99622 126 aa12.02□□□□□ -0.48
HLA-A-208ENST00000496081 MUC4Q99102 2169 aa12.02□□□□□ -0.48
HLA-A-208ENST00000496081 URB1-AS1Q96HZ7 61 aa12.02□□□□□ -0.49
HLA-A-208ENST00000496081 MDFICQ9P1T7 246 aa12.02□□□□□ -0.49
HLA-A-208ENST00000496081 SMIM15Q7Z3B0 74 aa12.01□□□□□ -0.49
HLA-A-208ENST00000496081 NIT1Q86X76 327 aa12.01□□□□□ -0.49
HLA-A-208ENST00000496081 ORMDL3Q8N138 153 aa12.01□□□□□ -0.49
HLA-A-208ENST00000496081 SMKR1H3BMG3 65 aa12□□□□□ -0.49
HLA-A-208ENST00000496081 CKS2P33552 79 aa12□□□□□ -0.49
HLA-A-208ENST00000496081 INSL3P51460 131 aa12□□□□□ -0.49
HLA-A-208ENST00000496081 C9orf85Q96MD7 179 aa12□□□□□ -0.49
HLA-A-208ENST00000496081 PRELID3AQ96N28 172 aa12□□□□□ -0.49
HLA-A-208ENST00000496081 WFDC10AQ9H1F0 79 aa12□□□□□ -0.49
HLA-A-208ENST00000496081 NXPH4O95158 308 aa12□□□□□ -0.49
HLA-A-208ENST00000496081 NCR2O95944 276 aa11.99□□□□□ -0.49
HLA-A-208ENST00000496081 C9orf66Q5T8R8 295 aa11.99□□□□□ -0.49
HLA-A-208ENST00000496081 SAMD10Q9BYL1 202 aa11.99□□□□□ -0.49
HLA-A-208ENST00000496081 TRGV11A0A075B6L2 103 aa11.98□□□□□ -0.49
HLA-A-208ENST00000496081 CBY3A6NI87 242 aa11.98□□□□□ -0.49
HLA-A-208ENST00000496081 INSP01308 110 aa11.98□□□□□ -0.49
HLA-A-208ENST00000496081 RIPPLY3P57055 190 aa11.98□□□□□ -0.49
HLA-A-208ENST00000496081 PYY3Q5JQD4 70 aa11.98□□□□□ -0.49
HLA-A-208ENST00000496081 RNASEKQ6P5S7 137 aaKnown RBP11.98□□□□□ -0.49
HLA-A-208ENST00000496081 C20orf144Q9BQM9 153 aa11.98□□□□□ -0.49
HLA-A-208ENST00000496081 XCL2Q9UBD3 114 aa11.98□□□□□ -0.49
HLA-A-208ENST00000496081 FBN1P35555 2871 aaKnown RBP11.98□□□□□ -0.49
HLA-A-208ENST00000496081 GAS8-AS1O95177 125 aa11.97□□□□□ -0.49
HLA-A-208ENST00000496081 PPBPP02775 128 aa11.97□□□□□ -0.49
HLA-A-208ENST00000496081 HSBP1O75506 76 aa11.97□□□□□ -0.49
HLA-A-208ENST00000496081 NPYP01303 97 aa11.97□□□□□ -0.49
HLA-A-208ENST00000496081 LINC00614P0C842 121 aa11.97□□□□□ -0.49
HLA-A-208ENST00000496081 HTN1P15515 57 aa11.97□□□□□ -0.49
HLA-A-208ENST00000496081 PMCHP20382 165 aa11.97□□□□□ -0.49
HLA-A-208ENST00000496081 AMTP48728 403 aa11.97□□□□□ -0.49
HLA-A-208ENST00000496081 NUTF2P61970 127 aaKnown RBP11.97□□□□□ -0.49
HLA-A-208ENST00000496081 FAM19A2Q8N3H0 131 aa11.97□□□□□ -0.49
HLA-A-208ENST00000496081 C14orf178Q8N769 122 aaPredicted RBP11.97□□□□□ -0.49
HLA-A-208ENST00000496081 TMEM158Q8WZ71 300 aa11.97□□□□□ -0.49
HLA-A-208ENST00000496081 NOTCH3Q9UM47 2321 aa11.97□□□□□ -0.49
HLA-A-208ENST00000496081 PRM2P04554 102 aa11.96□□□□□ -0.49
HLA-A-208ENST00000496081 CHCHD1Q96BP2 118 aaKnown RBP11.96□□□□□ -0.49
HLA-A-208ENST00000496081 AP1S3Q96PC3 154 aa11.96□□□□□ -0.49
HLA-A-208ENST00000496081 LINC00467Q9BRT7 94 aa11.96□□□□□ -0.49
HLA-A-208ENST00000496081 DPH3P1Q9H4G8 78 aa11.96□□□□□ -0.49
HLA-A-208ENST00000496081 WFDC9Q8NEX5 89 aa11.95□□□□□ -0.5
HLA-A-208ENST00000496081 LINC01587Q99440 93 aa11.95□□□□□ -0.5
HLA-A-208ENST00000496081 GATA1P15976 413 aaPredicted RBP11.95□□□□□ -0.5
HLA-A-208ENST00000496081 C1orf158Q8N1D5 194 aa11.95□□□□□ -0.5
HLA-A-208ENST00000496081 ZNF747Q9BV97 191 aa11.95□□□□□ -0.5
HLA-A-208ENST00000496081 JPT2Q9H910 190 aa11.95□□□□□ -0.5
HLA-A-208ENST00000496081 TRAV26-2A0A0B4J265 109 aa11.94□□□□□ -0.5
HLA-A-208ENST00000496081 LOC389332A0A1B0GUA5 103 aa11.94□□□□□ -0.5
HLA-A-208ENST00000496081 TNFRSF6BO95407 300 aa11.94□□□□□ -0.5
HLA-A-208ENST00000496081 GIG44P09565 113 aaPredicted RBP11.94□□□□□ -0.5
HLA-A-208ENST00000496081 Q6ZWC4 215 aa11.94□□□□□ -0.5
HLA-A-208ENST00000496081 PRSS3P2Q8NHM4 247 aa11.94□□□□□ -0.5
HLA-A-208ENST00000496081 MDFIQ99750 246 aa11.94□□□□□ -0.5
HLA-A-208ENST00000496081 LAMTOR2Q9Y2Q5 125 aa11.94□□□□□ -0.5
HLA-A-208ENST00000496081 KIF25-AS1Q9Y6Z4 181 aa11.94□□□□□ -0.5
HLA-A-208ENST00000496081 RPL35AP18077 110 aaKnown RBP11.93□□□□□ -0.5
HLA-A-208ENST00000496081 IFI27P40305 119 aaPredicted RBP11.93□□□□□ -0.5
HLA-A-208ENST00000496081 S100A12P80511 92 aa11.93□□□□□ -0.5
HLA-A-208ENST00000496081 JOSD1Q15040 202 aaPredicted RBP11.93□□□□□ -0.5
HLA-A-208ENST00000496081 DEFB125Q8N687 156 aa11.93□□□□□ -0.5
HLA-A-208ENST00000496081 LINC00315P59091 139 aa11.92□□□□□ -0.5
HLA-A-208ENST00000496081 PMCHL1Q16048 86 aa11.92□□□□□ -0.5
HLA-A-208ENST00000496081 SYT8Q8NBV8 401 aa11.92□□□□□ -0.5
HLA-A-208ENST00000496081 MRAP2Q96G30 205 aa11.92□□□□□ -0.5
HLA-A-208ENST00000496081 MCRIP2Q9BUT9 160 aaKnown RBP11.92□□□□□ -0.5
HLA-A-208ENST00000496081 GTSCR1Q86UQ5 136 aa11.92□□□□□ -0.5
HLA-A-208ENST00000496081 NRACQ8N912 160 aa11.92□□□□□ -0.5
HLA-A-208ENST00000496081 TMEM208Q9BTX3 173 aa11.92□□□□□ -0.5
HLA-A-208ENST00000496081 IGHV1-24A0A0C4DH33 117 aa11.91□□□□□ -0.5
HLA-A-208ENST00000496081 MGPP08493 103 aa11.91□□□□□ -0.5
HLA-A-208ENST00000496081 IGLL1P15814 213 aa11.91□□□□□ -0.5
HLA-A-208ENST00000496081 ZNF876PQ49A33 203 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms