RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 DEFB112Q30KQ8 113 aa6.95□□□□□ -1.3
TM9SF4-207ENST00000495749 LINC01559Q495D7 138 aa6.95□□□□□ -1.3
TM9SF4-207ENST00000495749 PSMG3-AS1Q96PY0 264 aa6.95□□□□□ -1.3
TM9SF4-207ENST00000495749 AGPAT4-IT1Q9H0P7 198 aa6.95□□□□□ -1.3
TM9SF4-207ENST00000495749 TMEM160Q9NX00 188 aa6.95□□□□□ -1.3
TM9SF4-207ENST00000495749 UFC1Q9Y3C8 167 aa6.95□□□□□ -1.3
TM9SF4-207ENST00000495749 A4D1N5 150 aa6.94□□□□□ -1.3
TM9SF4-207ENST00000495749 SMIM13P0DJ93 91 aa6.94□□□□□ -1.3
TM9SF4-207ENST00000495749 FABP2P12104 132 aa6.94□□□□□ -1.3
TM9SF4-207ENST00000495749 ARL3P36405 182 aa6.94□□□□□ -1.3
TM9SF4-207ENST00000495749 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.94□□□□□ -1.3
TM9SF4-207ENST00000495749 EEF1AKMT3Q96AZ1 226 aa6.94□□□□□ -1.3
TM9SF4-207ENST00000495749 BEX4Q9NWD9 120 aaPredicted RBP6.94□□□□□ -1.3
TM9SF4-207ENST00000495749 JMJD1CQ15652 2540 aa6.94□□□□□ -1.3
TM9SF4-207ENST00000495749 CLPSL1A2RUU4 121 aa6.94□□□□□ -1.3
TM9SF4-207ENST00000495749 F6UB75 175 aa6.94□□□□□ -1.3
TM9SF4-207ENST00000495749 SMIM17P0DL12 118 aa6.94□□□□□ -1.3
TM9SF4-207ENST00000495749 SAMD5Q5TGI4 173 aa6.94□□□□□ -1.3
TM9SF4-207ENST00000495749 CHAC1Q9BUX1 264 aa6.94□□□□□ -1.3
TM9SF4-207ENST00000495749 ZMAT4Q9H898 229 aa6.94□□□□□ -1.3
TM9SF4-207ENST00000495749 TRBV25-1A0A075B6N4 114 aa6.93□□□□□ -1.3
TM9SF4-207ENST00000495749 SRSF2Q01130 221 aaKnown RBP6.93□□□□□ -1.3
TM9SF4-207ENST00000495749 DEFB104AQ8WTQ1 72 aa6.93□□□□□ -1.3
TM9SF4-207ENST00000495749 NPFFR1Q9GZQ6 430 aa6.93□□□□□ -1.3
TM9SF4-207ENST00000495749 ZFAND3Q9H8U3 227 aa6.93□□□□□ -1.3
TM9SF4-207ENST00000495749 B4DSR2 109 aa6.93□□□□□ -1.3
TM9SF4-207ENST00000495749 DPM2O94777 84 aa6.93□□□□□ -1.3
TM9SF4-207ENST00000495749 Q8N8P6 123 aa6.93□□□□□ -1.3
TM9SF4-207ENST00000495749 METTL26Q96S19 204 aa6.93□□□□□ -1.3
TM9SF4-207ENST00000495749 NHP2Q9NX24 153 aaKnown RBP6.93□□□□□ -1.3
TM9SF4-207ENST00000495749 MRPL35Q9NZE8 188 aaKnown RBP6.93□□□□□ -1.3
TM9SF4-207ENST00000495749 LINC01546A6NGU7 62 aa6.93□□□□□ -1.3
TM9SF4-207ENST00000495749 TMEM78Q5T7P6 136 aa6.93□□□□□ -1.3
TM9SF4-207ENST00000495749 G3V4G9 280 aa6.92□□□□□ -1.3
TM9SF4-207ENST00000495749 IGKV3-20P01619 116 aa6.92□□□□□ -1.3
TM9SF4-207ENST00000495749 SCGB2A2Q13296 93 aa6.92□□□□□ -1.3
TM9SF4-207ENST00000495749 OR5A1Q8NGJ0 315 aa6.92□□□□□ -1.3
TM9SF4-207ENST00000495749 C16orf92Q96LL3 132 aa6.92□□□□□ -1.3
TM9SF4-207ENST00000495749 C2CD3Q4AC94 2353 aa6.92□□□□□ -1.3
TM9SF4-207ENST00000495749 GCN1Q92616 2671 aaKnown RBP6.92□□□□□ -1.3
TM9SF4-207ENST00000495749 IGLV2-18A0A075B6J9 118 aa6.92□□□□□ -1.3
TM9SF4-207ENST00000495749 RPL24P83731 157 aaKnown RBP6.92□□□□□ -1.3
TM9SF4-207ENST00000495749 SPANXN1Q5VSR9 72 aa6.92□□□□□ -1.3
TM9SF4-207ENST00000495749 NEGR1Q7Z3B1 354 aa6.92□□□□□ -1.3
TM9SF4-207ENST00000495749 C11orf44Q8N8P7 122 aa6.92□□□□□ -1.3
TM9SF4-207ENST00000495749 MYOZ3Q8TDC0 251 aa6.92□□□□□ -1.3
TM9SF4-207ENST00000495749 SLC50A1Q9BRV3 221 aa6.92□□□□□ -1.3
TM9SF4-207ENST00000495749 ATP5LO75964 103 aa6.91□□□□□ -1.3
TM9SF4-207ENST00000495749 RAB9AP51151 201 aa6.91□□□□□ -1.3
TM9SF4-207ENST00000495749 HIGD1BQ9P298 99 aa6.91□□□□□ -1.3
TM9SF4-207ENST00000495749 TRAV8-2A0A0B4J237 113 aa6.91□□□□□ -1.3
TM9SF4-207ENST00000495749 RBAKDNA6NC62 111 aa6.91□□□□□ -1.3
TM9SF4-207ENST00000495749 LAGE3Q14657 143 aa6.91□□□□□ -1.3
TM9SF4-207ENST00000495749 C8orf86Q6ZUL3 223 aa6.91□□□□□ -1.3
TM9SF4-207ENST00000495749 MAPKAPK5-AS1Q8N8E1 139 aa6.91□□□□□ -1.3
TM9SF4-207ENST00000495749 NRACQ8N912 160 aa6.91□□□□□ -1.3
TM9SF4-207ENST00000495749 IGHV7-4-1A0A0J9YVY3 117 aa6.9□□□□□ -1.3
TM9SF4-207ENST00000495749 H3BVH4 76 aa6.9□□□□□ -1.3
TM9SF4-207ENST00000495749 DUX3Q96PT4 197 aa6.9□□□□□ -1.3
TM9SF4-207ENST00000495749 SMPXQ9UHP9 88 aa6.9□□□□□ -1.3
TM9SF4-207ENST00000495749 FN1P02751 2386 aaKnown RBP6.9□□□□□ -1.3
TM9SF4-207ENST00000495749 HIVEP2P31629 2446 aa6.9□□□□□ -1.31
TM9SF4-207ENST00000495749 PSMG4Q5JS54 123 aa6.9□□□□□ -1.31
TM9SF4-207ENST00000495749 KHDC1LQ5JSQ8 128 aa6.9□□□□□ -1.31
TM9SF4-207ENST00000495749 CEND1Q8N111 149 aa6.9□□□□□ -1.31
TM9SF4-207ENST00000495749 ZNF479Q96JC4 524 aa6.9□□□□□ -1.31
TM9SF4-207ENST00000495749 C20orf173Q96LM9 149 aa6.9□□□□□ -1.31
TM9SF4-207ENST00000495749 CYSRT1A8MQ03 144 aa6.89□□□□□ -1.31
TM9SF4-207ENST00000495749 PHLDA1Q8WV24 401 aaPredicted RBP6.89□□□□□ -1.31
TM9SF4-207ENST00000495749 Q96MF0 132 aa6.89□□□□□ -1.31
TM9SF4-207ENST00000495749 TRBV7-1A0A0A6YYK4 115 aa6.89□□□□□ -1.31
TM9SF4-207ENST00000495749 TEX48A0A1B0GUV7 120 aa6.89□□□□□ -1.31
TM9SF4-207ENST00000495749 A6NDX4 124 aa6.89□□□□□ -1.31
TM9SF4-207ENST00000495749 DEFB136Q30KP8 78 aa6.89□□□□□ -1.31
TM9SF4-207ENST00000495749 PRR9Q5T870 116 aa6.89□□□□□ -1.31
TM9SF4-207ENST00000495749 A0A087WX48 190 aa6.88□□□□□ -1.31
TM9SF4-207ENST00000495749 M0R381 172 aa6.88□□□□□ -1.31
TM9SF4-207ENST00000495749 TM2D2Q9BX73 214 aa6.88□□□□□ -1.31
TM9SF4-207ENST00000495749 FLNBO75369 2602 aaKnown RBP6.88□□□□□ -1.31
TM9SF4-207ENST00000495749 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.88□□□□□ -1.31
TM9SF4-207ENST00000495749 LINC01356Q8N9X3 169 aa6.88□□□□□ -1.31
TM9SF4-207ENST00000495749 HIST1H4GQ99525 98 aa6.88□□□□□ -1.31
TM9SF4-207ENST00000495749 RHPN1-AS1Q9BWJ2 59 aa6.88□□□□□ -1.31
TM9SF4-207ENST00000495749 HOXA3O43365 443 aaPredicted RBP6.87□□□□□ -1.31
TM9SF4-207ENST00000495749 IGHG2P01859 326 aa6.87□□□□□ -1.31
TM9SF4-207ENST00000495749 ID1P41134 155 aa6.87□□□□□ -1.31
TM9SF4-207ENST00000495749 C9orf47Q6ZRZ4 202 aa6.87□□□□□ -1.31
TM9SF4-207ENST00000495749 UNC79Q9P2D8 2635 aa6.87□□□□□ -1.31
TM9SF4-207ENST00000495749 C18orf65Q6ZTR6 163 aa6.87□□□□□ -1.31
TM9SF4-207ENST00000495749 IGLL5B9A064 214 aa6.87□□□□□ -1.31
TM9SF4-207ENST00000495749 AMTNQ6UX39 209 aa6.87□□□□□ -1.31
TM9SF4-207ENST00000495749 SMIM2Q9BVW6 85 aa6.87□□□□□ -1.31
TM9SF4-207ENST00000495749 S100A4P26447 101 aaKnown RBP6.86□□□□□ -1.31
TM9SF4-207ENST00000495749 C12orf74Q32Q52 190 aa6.86□□□□□ -1.31
TM9SF4-207ENST00000495749 WFDC11Q8NEX6 87 aa6.86□□□□□ -1.31
TM9SF4-207ENST00000495749 SCGB3A1Q96QR1 104 aa6.86□□□□□ -1.31
TM9SF4-207ENST00000495749 E9PLD3 99 aa6.86□□□□□ -1.31
TM9SF4-207ENST00000495749 H3BMG7 143 aa6.86□□□□□ -1.31
TM9SF4-207ENST00000495749 PLA2G2AP14555 144 aa6.86□□□□□ -1.31
TM9SF4-207ENST00000495749 HTN1P15515 57 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms