RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 M0R2N4 97 aa4.53□□□□□ -1.68
VIM-207ENST00000495528 NXPH4O95158 308 aa4.53□□□□□ -1.68
VIM-207ENST00000495528 IFNA1P01562 189 aa4.53□□□□□ -1.68
VIM-207ENST00000495528 ZNF688P0C7X2 276 aa4.53□□□□□ -1.68
VIM-207ENST00000495528 ZNF705DP0CH99 300 aaPredicted RBP4.53□□□□□ -1.68
VIM-207ENST00000495528 ZNF705BP0CI00 300 aaPredicted RBP4.53□□□□□ -1.68
VIM-207ENST00000495528 MEOX2P50222 304 aa4.53□□□□□ -1.68
VIM-207ENST00000495528 DEFB1P60022 68 aa4.53□□□□□ -1.68
VIM-207ENST00000495528 PSG3Q16557 428 aa4.53□□□□□ -1.68
VIM-207ENST00000495528 LYPD1Q8N2G4 141 aa4.53□□□□□ -1.68
VIM-207ENST00000495528 RXFP4Q8TDU9 374 aa4.53□□□□□ -1.68
VIM-207ENST00000495528 SLC50A1Q9BRV3 221 aa4.53□□□□□ -1.68
VIM-207ENST00000495528 OTORQ9NRC9 128 aa4.53□□□□□ -1.68
VIM-207ENST00000495528 RPH3ALQ9UNE2 315 aa4.53□□□□□ -1.68
VIM-207ENST00000495528 AGRNO00468 2067 aa4.53□□□□□ -1.68
VIM-207ENST00000495528 M0R3E3 92 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 ISLRO14498 428 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 MIFP14174 115 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 CSN1S1P47710 185 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 ATP5G3P48201 142 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 SNRPD3P62318 126 aaKnown RBP4.52□□□□□ -1.69
VIM-207ENST00000495528 PDE6HQ13956 83 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 PSMG4Q5JS54 123 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 STHQ8IWL8 128 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 SLC7A5P1Q8MH63 180 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 POM121L12Q8N7R1 296 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 ZNF738Q8NE65 137 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 CMTM2Q8TAZ6 248 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 FAM210AQ96ND0 272 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 NKX6-2Q9C056 277 aaPredicted RBP4.52□□□□□ -1.69
VIM-207ENST00000495528 TREM1Q9NP99 234 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 MANBALQ9NQG1 85 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 VAX2Q9UIW0 290 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 EPDR1Q9UM22 224 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 MUC4Q99102 2169 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 PKD1P98161 4303 aa4.52□□□□□ -1.69
VIM-207ENST00000495528 DEFB131BA0A096LNP1 70 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 TRAV2A0A0B4J234 112 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 LINC00862A6NCI5 91 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 KNCNA6PVL3 124 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 GGTLC3B5MD39 225 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 C9JQL5 133 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 F6UB75 175 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 F6UZH7 168 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 ZNF253O75346 499 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 BCL2P10415 239 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 CEBPGP53567 150 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 GNG5P63218 68 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 ERCC8Q13216 396 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 PEA15Q15121 130 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 C12orf74Q32Q52 190 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 ZNF506Q5JVG8 444 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 GOLT1AQ6ZVE7 132 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 Q6ZVQ6 151 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 CSNK1G2-AS1Q8NCQ2 148 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 RPUSD4Q96CM3 377 aaKnown RBP4.51□□□□□ -1.69
VIM-207ENST00000495528 ATG101Q9BSB4 218 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 PARLQ9H300 379 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 MED9Q9NWA0 146 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 CLEC5AQ9NY25 188 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 CELA1Q9UNI1 258 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 PRELID1Q9Y255 219 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 HSPG2P98160 4391 aa4.51□□□□□ -1.69
VIM-207ENST00000495528 IGKV2-40A0A087WW87 121 aaPredicted RBP4.5□□□□□ -1.69
VIM-207ENST00000495528 RAB19A4D1S5 217 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 IGKV2D-40P01614 121 aaPredicted RBP4.5□□□□□ -1.69
VIM-207ENST00000495528 SRP19P09132 144 aaKnown RBP4.5□□□□□ -1.69
VIM-207ENST00000495528 P0DMU3 169 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 FAM231AP0DMU4 169 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 FAM231CP0DMU5 169 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 TAGLN2P37802 199 aaKnown RBP4.5□□□□□ -1.69
VIM-207ENST00000495528 MEF2BQ02080 365 aaPredicted RBP4.5□□□□□ -1.69
VIM-207ENST00000495528 HIST1H1AQ02539 215 aaPredicted RBP4.5□□□□□ -1.69
VIM-207ENST00000495528 LGALS9BQ3B8N2 356 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 ACTL10Q5JWF8 245 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 GDF5OSQ5U4N7 250 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 SAMD13Q5VXD3 122 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 EBLN2Q6P2I7 272 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 COMMD7Q86VX2 200 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 Q8N377 158 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 C5orf17Q8NAS9 161 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 OR4B1Q8NGF8 309 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 OR10J6PQ8NGY7 276 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 TXNDC17Q9BRA2 123 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 AGPAT4-IT1Q9H0P7 198 aa4.5□□□□□ -1.69
VIM-207ENST00000495528 IGLV2-18A0A075B6J9 118 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 TRAV8-1A0A0A6YYK1 113 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 IGHV3-38A0A0C4DH36 116 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 A0A0J9YX75 114 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 K7EQM0 130 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 PEX7O00628 323 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 PDE6DO43924 150 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 DUSP14O95147 198 aaKnown RBP4.49□□□□□ -1.69
VIM-207ENST00000495528 TCRAP04437 139 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 GATA1P15976 413 aaPredicted RBP4.49□□□□□ -1.69
VIM-207ENST00000495528 FXYD7P58549 80 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 ZNF674Q2M3X9 581 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 MORN3Q6PF18 240 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms