RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	FOXI2	Q6ZQN5	318 aa		10.19	□□□□□ -0.78
SUPT20H-222	ENST00000495071	NDUFA4	O00483	81 aa		10.18	□□□□□ -0.78
SUPT20H-222	ENST00000495071	EMP1	P54849	157 aa		10.18	□□□□□ -0.78
SUPT20H-222	ENST00000495071	PRADC1	Q9BSG0	188 aa		10.18	□□□□□ -0.78
SUPT20H-222	ENST00000495071	PRSS29P	A6NIE9	313 aa		10.18	□□□□□ -0.78
SUPT20H-222	ENST00000495071	LY6D	Q14210	128 aa		10.18	□□□□□ -0.78
SUPT20H-222	ENST00000495071	CD300E	Q496F6	205 aa	Predicted RBP	10.18	□□□□□ -0.78
SUPT20H-222	ENST00000495071	RHPN1-AS1	Q9BWJ2	59 aa		10.18	□□□□□ -0.78
SUPT20H-222	ENST00000495071	SFTA2	Q6UW10	78 aa		10.18	□□□□□ -0.78
SUPT20H-222	ENST00000495071	IGHV1-69D	A0A0B4J2H0	117 aa		10.17	□□□□□ -0.78
SUPT20H-222	ENST00000495071	IGHV1-69	P01742	117 aa		10.17	□□□□□ -0.78
SUPT20H-222	ENST00000495071	ETDB	Q3ZM63	59 aa		10.17	□□□□□ -0.78
SUPT20H-222	ENST00000495071	BAALC	Q8WXS3	180 aa		10.17	□□□□□ -0.78
SUPT20H-222	ENST00000495071	SLC25A16	P16260	332 aa		10.17	□□□□□ -0.78
SUPT20H-222	ENST00000495071	KLK9	Q2XQG4	91 aa		10.17	□□□□□ -0.78
SUPT20H-222	ENST00000495071	FAM159A	Q6UWV7	190 aa		10.17	□□□□□ -0.78
SUPT20H-222	ENST00000495071	NEXN-AS1	Q8NBZ9	246 aa		10.17	□□□□□ -0.78
SUPT20H-222	ENST00000495071	MRPL16	Q9NX20	251 aa	Known RBP	10.17	□□□□□ -0.78
SUPT20H-222	ENST00000495071	KLK9	Q9UKQ9	250 aa		10.17	□□□□□ -0.78
SUPT20H-222	ENST00000495071	HOXA3	O43365	443 aa	Predicted RBP	10.17	□□□□□ -0.78
SUPT20H-222	ENST00000495071	TMEM238	C9JI98	176 aa		10.16	□□□□□ -0.78
SUPT20H-222	ENST00000495071		F8W1H4	67 aa		10.16	□□□□□ -0.78
SUPT20H-222	ENST00000495071		H3BUX3	64 aa		10.16	□□□□□ -0.78
SUPT20H-222	ENST00000495071	PPP1R17	O96001	155 aa		10.16	□□□□□ -0.78
SUPT20H-222	ENST00000495071	GAGE13	Q4V321	117 aa		10.16	□□□□□ -0.78
SUPT20H-222	ENST00000495071	SH2D6	Q7Z4S9	175 aa		10.16	□□□□□ -0.78
SUPT20H-222	ENST00000495071	GPHB5	Q86YW7	130 aa		10.16	□□□□□ -0.78
SUPT20H-222	ENST00000495071	RRN3P1	Q2M238	152 aa		10.16	□□□□□ -0.78
SUPT20H-222	ENST00000495071	GTSF1L	Q9H1H1	148 aa		10.16	□□□□□ -0.78
SUPT20H-222	ENST00000495071	CHD8	Q9HCK8	2581 aa		10.16	□□□□□ -0.78
SUPT20H-222	ENST00000495071	FAM74A4	Q5TZK3	123 aa		10.15	□□□□□ -0.78
SUPT20H-222	ENST00000495071		A0A087WWL8	130 aa		10.15	□□□□□ -0.78
SUPT20H-222	ENST00000495071	LOC107984156	A0A0G2JMH3	177 aa		10.15	□□□□□ -0.78
SUPT20H-222	ENST00000495071	DUSP14	O95147	198 aa	Known RBP	10.15	□□□□□ -0.78
SUPT20H-222	ENST00000495071	ARL17A	Q8IVW1	177 aa		10.15	□□□□□ -0.78
SUPT20H-222	ENST00000495071	PGPEP1	Q9NXJ5	209 aa		10.15	□□□□□ -0.78
SUPT20H-222	ENST00000495071	TMEM238L	A0A1B0GVL6	79 aa		10.15	□□□□□ -0.78
SUPT20H-222	ENST00000495071		A6NJY4	79 aa		10.15	□□□□□ -0.78
SUPT20H-222	ENST00000495071	LGALS1	P09382	135 aa	Known RBP	10.15	□□□□□ -0.78
SUPT20H-222	ENST00000495071	ATP6V0B	Q99437	205 aa		10.15	□□□□□ -0.78
SUPT20H-222	ENST00000495071	TP53TG1	Q9Y2A0	90 aa		10.15	□□□□□ -0.78
SUPT20H-222	ENST00000495071	CREBBP	Q92793	2442 aa		10.15	□□□□□ -0.78
SUPT20H-222	ENST00000495071	IGKV3-20	P01619	116 aa		10.14	□□□□□ -0.79
SUPT20H-222	ENST00000495071	CD7	P09564	240 aa		10.14	□□□□□ -0.79
SUPT20H-222	ENST00000495071	HERVK_113	P61574	105 aa		10.14	□□□□□ -0.79
SUPT20H-222	ENST00000495071	SAMD13	Q5VXD3	122 aa		10.14	□□□□□ -0.79
SUPT20H-222	ENST00000495071	USMG5	Q96IX5	58 aa		10.14	□□□□□ -0.79
SUPT20H-222	ENST00000495071	TRBV7-3	A0A075B6L6	115 aa		10.14	□□□□□ -0.79
SUPT20H-222	ENST00000495071		A0A1B0GWB2	263 aa		10.14	□□□□□ -0.79
SUPT20H-222	ENST00000495071	KIR2DL4	Q99706	377 aa		10.14	□□□□□ -0.79
SUPT20H-222	ENST00000495071	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.14	□□□□□ -0.79
SUPT20H-222	ENST00000495071	SPTBN4	Q9H254	2564 aa		10.14	□□□□□ -0.79
SUPT20H-222	ENST00000495071	APOM	O95445	188 aa		10.14	□□□□□ -0.79
SUPT20H-222	ENST00000495071	BLCAP	P62952	87 aa		10.14	□□□□□ -0.79
SUPT20H-222	ENST00000495071	KLHL30-AS1	Q8NEE0	82 aa		10.14	□□□□□ -0.79
SUPT20H-222	ENST00000495071	IGHV4-39	P01824	125 aa		10.13	□□□□□ -0.79
SUPT20H-222	ENST00000495071	IGHV4-38-2	P0DP08	117 aa		10.13	□□□□□ -0.79
SUPT20H-222	ENST00000495071	SMAGP	Q0VAQ4	97 aa		10.13	□□□□□ -0.79
SUPT20H-222	ENST00000495071	TMEM170B	Q5T4T1	132 aa		10.13	□□□□□ -0.79
SUPT20H-222	ENST00000495071	JPT2	Q9H910	190 aa		10.13	□□□□□ -0.79
SUPT20H-222	ENST00000495071	TRAV12-3	A0A0B4J271	114 aa		10.13	□□□□□ -0.79
SUPT20H-222	ENST00000495071	RNASE3	P12724	160 aa	Known RBP	10.13	□□□□□ -0.79
SUPT20H-222	ENST00000495071	DAZ1	Q9NQZ3	744 aa	Known RBP	10.13	□□□□□ -0.79
SUPT20H-222	ENST00000495071	CSPG4	Q6UVK1	2322 aa		10.13	□□□□□ -0.79
SUPT20H-222	ENST00000495071	ID1	P41134	155 aa		10.13	□□□□□ -0.79
SUPT20H-222	ENST00000495071	SOCS3	O14543	225 aa		10.12	□□□□□ -0.79
SUPT20H-222	ENST00000495071	IGHV4-61	A0A0C4DH41	118 aa		10.12	□□□□□ -0.79
SUPT20H-222	ENST00000495071	SIGMAR1	Q99720	223 aa		10.12	□□□□□ -0.79
SUPT20H-222	ENST00000495071	PIMREG	Q9BSJ6	248 aa		10.12	□□□□□ -0.79
SUPT20H-222	ENST00000495071	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.12	□□□□□ -0.79
SUPT20H-222	ENST00000495071	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.12	□□□□□ -0.79
SUPT20H-222	ENST00000495071	LINC01549	A6NIU2	74 aa		10.12	□□□□□ -0.79
SUPT20H-222	ENST00000495071	C19orf84	I3L1E1	186 aa		10.11	□□□□□ -0.79
SUPT20H-222	ENST00000495071	PLEKHB2	Q96CS7	222 aa		10.11	□□□□□ -0.79
SUPT20H-222	ENST00000495071	MED14OS	P0DP75	135 aa		10.11	□□□□□ -0.79
SUPT20H-222	ENST00000495071	RPL39	P62891	51 aa	Known RBP	10.11	□□□□□ -0.79
SUPT20H-222	ENST00000495071	C11orf86	A6NJI1	115 aa		10.11	□□□□□ -0.79
SUPT20H-222	ENST00000495071	AZU1	P20160	251 aa		10.11	□□□□□ -0.79
SUPT20H-222	ENST00000495071	PSMB2	P49721	201 aa		10.1	□□□□□ -0.79
SUPT20H-222	ENST00000495071	ZNF56	Q15929	161 aa		10.1	□□□□□ -0.79
SUPT20H-222	ENST00000495071	C19orf54	Q5BKX5	351 aa		10.1	□□□□□ -0.79
SUPT20H-222	ENST00000495071	MAP1A	P78559	2803 aa	Predicted RBP	10.1	□□□□□ -0.79
SUPT20H-222	ENST00000495071	GAGE12H	A6NDE8	117 aa		10.1	□□□□□ -0.79
SUPT20H-222	ENST00000495071	VCY	O14598	125 aa		10.1	□□□□□ -0.79
SUPT20H-222	ENST00000495071	IGHG2	P01859	326 aa		10.1	□□□□□ -0.79
SUPT20H-222	ENST00000495071	ZNF688	P0C7X2	276 aa		10.1	□□□□□ -0.79
SUPT20H-222	ENST00000495071	SUMO4	Q6EEV6	95 aa		10.1	□□□□□ -0.79
SUPT20H-222	ENST00000495071		Q6ZS46	218 aa		10.1	□□□□□ -0.79
SUPT20H-222	ENST00000495071	SDHAF1	A6NFY7	115 aa		10.1	□□□□□ -0.79
SUPT20H-222	ENST00000495071	ZFP2	Q6ZN57	461 aa		10.1	□□□□□ -0.79
SUPT20H-222	ENST00000495071	EDN2	P20800	178 aa		10.09	□□□□□ -0.79
SUPT20H-222	ENST00000495071	PMVK	Q15126	192 aa		10.09	□□□□□ -0.79
SUPT20H-222	ENST00000495071	PAPPA-AS1	Q5QFB9	102 aa		10.09	□□□□□ -0.79
SUPT20H-222	ENST00000495071	ZNF418	Q8TF45	676 aa	Predicted RBP	10.09	□□□□□ -0.79
SUPT20H-222	ENST00000495071	CRIP2	P52943	208 aa	Predicted RBP	10.09	□□□□□ -0.79
SUPT20H-222	ENST00000495071	CLEC2A	Q6UVW9	174 aa		10.09	□□□□□ -0.79
SUPT20H-222	ENST00000495071	TRAV12-2	A0A075B6T6	113 aa		10.08	□□□□□ -0.8
SUPT20H-222	ENST00000495071	RNF223	E7ERA6	249 aa		10.08	□□□□□ -0.8
SUPT20H-222	ENST00000495071	TMEM95	Q3KNT9	176 aa		10.08	□□□□□ -0.8
SUPT20H-222	ENST00000495071	SPAG8	Q99932	426 aa	Predicted RBP	10.08	□□□□□ -0.8

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