RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 MGST1P10620 155 aaKnown RBP14.72□□□□□ -0.05
HDDC3-203ENST00000494993 GCHFRP30047 84 aa14.72□□□□□ -0.05
HDDC3-203ENST00000494993 LAGE3Q14657 143 aa14.72□□□□□ -0.05
HDDC3-203ENST00000494993 ZFP69Q49AA0 526 aa14.72□□□□□ -0.05
HDDC3-203ENST00000494993 SMUG1Q53HV7 270 aa14.72□□□□□ -0.05
HDDC3-203ENST00000494993 Q6ZSN1 163 aa14.72□□□□□ -0.05
HDDC3-203ENST00000494993 HSD17B11Q8NBQ5 300 aa14.72□□□□□ -0.05
HDDC3-203ENST00000494993 RAB24Q969Q5 203 aa14.72□□□□□ -0.05
HDDC3-203ENST00000494993 RNASE3P12724 160 aaKnown RBP14.71□□□□□ -0.05
HDDC3-203ENST00000494993 FLI1Q01543 452 aaPredicted RBP14.71□□□□□ -0.05
HDDC3-203ENST00000494993 GGTLC3B5MD39 225 aa14.7□□□□□ -0.06
HDDC3-203ENST00000494993 SUMO1P63165 101 aaKnown RBP14.7□□□□□ -0.06
HDDC3-203ENST00000494993 PRNTQ86SH4 94 aa14.7□□□□□ -0.06
HDDC3-203ENST00000494993 PSMG3Q9BT73 122 aaPredicted RBP14.7□□□□□ -0.06
HDDC3-203ENST00000494993 EPDR1Q9UM22 224 aa14.7□□□□□ -0.06
HDDC3-203ENST00000494993 CYB561D1Q8N8Q1 229 aa14.69□□□□□ -0.06
HDDC3-203ENST00000494993 FAM30AQ9NZY2 134 aa14.69□□□□□ -0.06
HDDC3-203ENST00000494993 A6NHS1 94 aa14.68□□□□□ -0.06
HDDC3-203ENST00000494993 ATP6V0CP27449 155 aa14.68□□□□□ -0.06
HDDC3-203ENST00000494993 TM2D2Q9BX73 214 aa14.68□□□□□ -0.06
HDDC3-203ENST00000494993 TMEM167BQ9NRX6 74 aa14.68□□□□□ -0.06
HDDC3-203ENST00000494993 CXorf1O96002 111 aa14.67□□□□□ -0.06
HDDC3-203ENST00000494993 MBP02144 154 aa14.67□□□□□ -0.06
HDDC3-203ENST00000494993 C1QBP02746 253 aa14.67□□□□□ -0.06
HDDC3-203ENST00000494993 SAPCD1Q5SSQ6 148 aa14.67□□□□□ -0.06
HDDC3-203ENST00000494993 PARLQ9H300 379 aa14.67□□□□□ -0.06
HDDC3-203ENST00000494993 LINC00694P0DN24 101 aa14.66□□□□□ -0.06
HDDC3-203ENST00000494993 SERF2P84101 59 aa14.66□□□□□ -0.06
HDDC3-203ENST00000494993 WFDC2Q14508 124 aa14.66□□□□□ -0.06
HDDC3-203ENST00000494993 ZFP2Q6ZN57 461 aa14.66□□□□□ -0.06
HDDC3-203ENST00000494993 Q8N3U1 123 aa14.66□□□□□ -0.06
HDDC3-203ENST00000494993 AQP10Q96PS8 301 aa14.66□□□□□ -0.06
HDDC3-203ENST00000494993 SH3BGRL3Q9H299 93 aa14.66□□□□□ -0.06
HDDC3-203ENST00000494993 IGKV3D-20A0A0C4DH25 116 aa14.65□□□□□ -0.06
HDDC3-203ENST00000494993 GAGE12JA6NER3 117 aa14.65□□□□□ -0.06
HDDC3-203ENST00000494993 A8MWV9 139 aa14.65□□□□□ -0.06
HDDC3-203ENST00000494993 GAGE1Q13065 139 aa14.65□□□□□ -0.06
HDDC3-203ENST00000494993 GAGE4Q13068 117 aa14.65□□□□□ -0.06
HDDC3-203ENST00000494993 GAGE5Q13069 117 aa14.65□□□□□ -0.06
HDDC3-203ENST00000494993 GAGE13Q4V321 117 aa14.65□□□□□ -0.06
HDDC3-203ENST00000494993 PIK3CD-AS1Q5SR53 167 aa14.65□□□□□ -0.06
HDDC3-203ENST00000494993 ALG5Q9Y673 324 aa14.65□□□□□ -0.06
HDDC3-203ENST00000494993 S100A4P26447 101 aaKnown RBP14.64□□□□□ -0.07
HDDC3-203ENST00000494993 ACTR3CQ9C0K3 210 aaPredicted RBP14.64□□□□□ -0.07
HDDC3-203ENST00000494993 TNFSF18Q9UNG2 199 aa14.64□□□□□ -0.07
HDDC3-203ENST00000494993 TRAV8-3A0A0A6YYJ7 113 aa14.63□□□□□ -0.07
HDDC3-203ENST00000494993 A0A1W2PRE2 83 aa14.63□□□□□ -0.07
HDDC3-203ENST00000494993 LGALSLQ3ZCW2 172 aaPredicted RBP14.63□□□□□ -0.07
HDDC3-203ENST00000494993 LINC00479Q96M42 142 aa14.63□□□□□ -0.07
HDDC3-203ENST00000494993 TRAV34A0A0B4J273 112 aa14.62□□□□□ -0.07
HDDC3-203ENST00000494993 ASIPP42127 132 aa14.62□□□□□ -0.07
HDDC3-203ENST00000494993 ARL2-SNX15V9GYD0 113 aa14.62□□□□□ -0.07
HDDC3-203ENST00000494993 FABP5P3A8MUU1 101 aa14.61□□□□□ -0.07
HDDC3-203ENST00000494993 TOR2AQ5JU69 321 aa14.61□□□□□ -0.07
HDDC3-203ENST00000494993 UFSP1Q6NVU6 142 aa14.61□□□□□ -0.07
HDDC3-203ENST00000494993 Q6ZSA8 131 aa14.61□□□□□ -0.07
HDDC3-203ENST00000494993 DAZ4Q86SG3 579 aaKnown RBP14.61□□□□□ -0.07
HDDC3-203ENST00000494993 OR2T35Q8NGX2 323 aa14.61□□□□□ -0.07
HDDC3-203ENST00000494993 JPT2Q9H910 190 aa14.61□□□□□ -0.07
HDDC3-203ENST00000494993 DAZ3Q9NR90 486 aaKnown RBP14.61□□□□□ -0.07
HDDC3-203ENST00000494993 Q9UF83 564 aa14.61□□□□□ -0.07
HDDC3-203ENST00000494993 LECT2O14960 151 aa14.6□□□□□ -0.07
HDDC3-203ENST00000494993 C14orf178Q8N769 122 aaPredicted RBP14.6□□□□□ -0.07
HDDC3-203ENST00000494993 SAMD10Q9BYL1 202 aa14.6□□□□□ -0.07
HDDC3-203ENST00000494993 IL36BQ9NZH7 164 aa14.6□□□□□ -0.07
HDDC3-203ENST00000494993 A0A087WWC5 75 aa14.59□□□□□ -0.07
HDDC3-203ENST00000494993 FGF8P55075 233 aaPredicted RBP14.59□□□□□ -0.07
HDDC3-203ENST00000494993 B4DEV8 164 aa14.58□□□□□ -0.08
HDDC3-203ENST00000494993 H3BVH4 76 aa14.58□□□□□ -0.08
HDDC3-203ENST00000494993 IFNA7P01567 189 aa14.58□□□□□ -0.08
HDDC3-203ENST00000494993 Q86TA4 180 aa14.58□□□□□ -0.08
HDDC3-203ENST00000494993 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.57□□□□□ -0.08
HDDC3-203ENST00000494993 PEX7O00628 323 aa14.57□□□□□ -0.08
HDDC3-203ENST00000494993 ZNF726P1Q15940 193 aa14.57□□□□□ -0.08
HDDC3-203ENST00000494993 DMRTA1Q5VZB9 504 aa14.57□□□□□ -0.08
HDDC3-203ENST00000494993 MED28Q9H204 178 aa14.57□□□□□ -0.08
HDDC3-203ENST00000494993 CTXND1A0A1B0GTU2 59 aa14.56□□□□□ -0.08
HDDC3-203ENST00000494993 J3QL48 77 aa14.56□□□□□ -0.08
HDDC3-203ENST00000494993 RHODO00212 210 aa14.56□□□□□ -0.08
HDDC3-203ENST00000494993 PLA2G1BP04054 148 aaKnown RBP14.56□□□□□ -0.08
HDDC3-203ENST00000494993 UBE2G2P60604 165 aa14.56□□□□□ -0.08
HDDC3-203ENST00000494993 Q5BKY6 102 aa14.56□□□□□ -0.08
HDDC3-203ENST00000494993 DNLZQ5SXM8 178 aa14.56□□□□□ -0.08
HDDC3-203ENST00000494993 RPL7L1Q6DKI1 246 aaKnown RBP14.56□□□□□ -0.08
HDDC3-203ENST00000494993 SYT8Q8NBV8 401 aa14.56□□□□□ -0.08
HDDC3-203ENST00000494993 COX11Q9Y6N1 276 aa14.56□□□□□ -0.08
HDDC3-203ENST00000494993 LINC00528Q8N1L1 170 aa14.55□□□□□ -0.08
HDDC3-203ENST00000494993 BAALCQ8WXS3 180 aa14.55□□□□□ -0.08
HDDC3-203ENST00000494993 BORCS7-ASMTA0A0B4J1R7 106 aa14.54□□□□□ -0.08
HDDC3-203ENST00000494993 KRBOX1C9JBD0 128 aa14.54□□□□□ -0.08
HDDC3-203ENST00000494993 ARMS2P0C7Q2 107 aa14.54□□□□□ -0.08
HDDC3-203ENST00000494993 CRIP1P50238 77 aa14.54□□□□□ -0.08
HDDC3-203ENST00000494993 NIT1Q86X76 327 aa14.54□□□□□ -0.08
HDDC3-203ENST00000494993 INO80EQ8NBZ0 244 aaPredicted RBP14.54□□□□□ -0.08
HDDC3-203ENST00000494993 OR11H4Q8NGC9 324 aa14.54□□□□□ -0.08
HDDC3-203ENST00000494993 HIST1H2BAQ96A08 127 aa14.54□□□□□ -0.08
HDDC3-203ENST00000494993 RMI2Q96E14 147 aa14.54□□□□□ -0.08
HDDC3-203ENST00000494993 ZC2HC1AQ96GY0 325 aa14.54□□□□□ -0.08
HDDC3-203ENST00000494993 URGCP-MRPS24S4R325 110 aa14.54□□□□□ -0.08
HDDC3-203ENST00000494993 RNF222A6NCQ9 220 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms