RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 HEATR1Q9H583 2144 aaKnown RBP3.61□□□□□ -1.83
PRKD3-210ENST00000494667 NDUFC2O95298 119 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 FAM19A4Q96LR4 140 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 OBSCN-AS1Q96MR7 158 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 IGHV1-3A0A0C4DH29 117 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 IGHV3-64DA0A0J9YX35 117 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 TRBV27A0A0K0K1C4 114 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 IGLV1-47P01700 117 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 KNTC1P50748 2209 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 LINC00315P59091 139 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 MIAQ16674 131 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 TMEM61Q8N0U2 210 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 DYNAPQ8N1N2 210 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 NPBQ8NG41 125 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 SPRR3Q9UBC9 169 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 CABIN1Q9Y6J0 2220 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 ASCL5Q7RTU5 278 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 C22orf24Q9Y442 160 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 SPINK14Q6IE38 97 aa3.6□□□□□ -1.83
PRKD3-210ENST00000494667 SFTA2Q6UW10 78 aa3.6□□□□□ -1.83
PRKD3-210ENST00000494667 ZNRD1Q9P1U0 126 aa3.6□□□□□ -1.83
PRKD3-210ENST00000494667 INAFM2P0DMQ5 153 aa3.6□□□□□ -1.83
PRKD3-210ENST00000494667 RNASE4P34096 147 aaKnown RBP3.6□□□□□ -1.83
PRKD3-210ENST00000494667 ZNF256Q9Y2P7 627 aaPredicted RBP3.6□□□□□ -1.83
PRKD3-210ENST00000494667 TRAV26-2A0A0B4J265 109 aa3.6□□□□□ -1.83
PRKD3-210ENST00000494667 UBE2E1P51965 193 aa3.6□□□□□ -1.83
PRKD3-210ENST00000494667 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.6□□□□□ -1.83
PRKD3-210ENST00000494667 PRIMA1Q86XR5 153 aa3.6□□□□□ -1.83
PRKD3-210ENST00000494667 Q8TAT8 98 aa3.6□□□□□ -1.83
PRKD3-210ENST00000494667 UNC80Q8N2C7 3258 aa3.59□□□□□ -1.83
PRKD3-210ENST00000494667 IGHV3OR16-10A0A075B7F0 116 aa3.59□□□□□ -1.83
PRKD3-210ENST00000494667 CDX4O14627 284 aaPredicted RBP3.59□□□□□ -1.83
PRKD3-210ENST00000494667 IGHV1-46P01743 117 aa3.59□□□□□ -1.83
PRKD3-210ENST00000494667 MRPS36P82909 103 aaKnown RBP3.59□□□□□ -1.83
PRKD3-210ENST00000494667 NUP37Q8NFH4 326 aa3.59□□□□□ -1.83
PRKD3-210ENST00000494667 CCL13Q99616 98 aa3.59□□□□□ -1.83
PRKD3-210ENST00000494667 JPT2Q9H910 190 aa3.59□□□□□ -1.83
PRKD3-210ENST00000494667 KLK5Q9Y337 293 aaPredicted RBP3.59□□□□□ -1.83
PRKD3-210ENST00000494667 PYGO1Q9Y3Y4 419 aa3.59□□□□□ -1.83
PRKD3-210ENST00000494667 I3L3M4 83 aa3.59□□□□□ -1.83
PRKD3-210ENST00000494667 COX7A2LO14548 114 aa3.59□□□□□ -1.83
PRKD3-210ENST00000494667 LYZL6O75951 148 aa3.59□□□□□ -1.83
PRKD3-210ENST00000494667 FANCD2OSQ96PS1 177 aa3.59□□□□□ -1.83
PRKD3-210ENST00000494667 U3KQE9 123 aa3.59□□□□□ -1.83
PRKD3-210ENST00000494667 TRGV5A0A0B4J1U4 118 aa3.59□□□□□ -1.84
PRKD3-210ENST00000494667 VCYO14598 125 aa3.59□□□□□ -1.84
PRKD3-210ENST00000494667 IGHV4-39P01824 125 aa3.59□□□□□ -1.84
PRKD3-210ENST00000494667 IGHV1-8P0DP01 117 aa3.59□□□□□ -1.84
PRKD3-210ENST00000494667 TRANK1O15050 2925 aa3.59□□□□□ -1.84
PRKD3-210ENST00000494667 ITLN2Q8WWU7 325 aaPredicted RBP3.58□□□□□ -1.84
PRKD3-210ENST00000494667 TP53TG1Q9Y2A0 90 aa3.58□□□□□ -1.84
PRKD3-210ENST00000494667 SPANXN1Q5VSR9 72 aa3.58□□□□□ -1.84
PRKD3-210ENST00000494667 PIMREGQ9BSJ6 248 aa3.58□□□□□ -1.84
PRKD3-210ENST00000494667 CYSTM1Q9H1C7 97 aa3.58□□□□□ -1.84
PRKD3-210ENST00000494667 NAV3Q8IVL0 2385 aa3.58□□□□□ -1.84
PRKD3-210ENST00000494667 LOXP28300 417 aaPredicted RBP3.58□□□□□ -1.84
PRKD3-210ENST00000494667 SERP1Q9Y6X1 66 aa3.58□□□□□ -1.84
PRKD3-210ENST00000494667 UTRNP46939 3433 aa3.58□□□□□ -1.84
PRKD3-210ENST00000494667 TRAV13-1A0A0B4J241 112 aa3.58□□□□□ -1.84
PRKD3-210ENST00000494667 hADV29S1A0JD25 119 aa3.58□□□□□ -1.84
PRKD3-210ENST00000494667 DLX1P56177 255 aa3.58□□□□□ -1.84
PRKD3-210ENST00000494667 C4orf26Q17RF5 130 aa3.58□□□□□ -1.84
PRKD3-210ENST00000494667 ATP5EP2Q5VTU8 51 aa3.58□□□□□ -1.84
PRKD3-210ENST00000494667 RPL39LQ96EH5 51 aaKnown RBP3.58□□□□□ -1.84
PRKD3-210ENST00000494667 C9orf85Q96MD7 179 aa3.58□□□□□ -1.84
PRKD3-210ENST00000494667 DOCK10Q96BY6 2186 aa3.58□□□□□ -1.84
PRKD3-210ENST00000494667 CHD9Q3L8U1 2897 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 PRAC2D3DTV9 90 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 LYPD5Q6UWN5 251 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 C3orf56Q8N813 242 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 HES7Q9BYE0 225 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 ASXL3Q9C0F0 2248 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 TRBV10-3A0A0K0K1G6 114 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 BUB1B-PAK6H3BSN5 160 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 CCL3L1P16619 93 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 OVOL2Q9BRP0 275 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 C16orf95Q9H693 158 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 ASCC3Q8N3C0 2202 aaKnown RBP3.57□□□□□ -1.84
PRKD3-210ENST00000494667 CACNA1GO43497 2377 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 TRAV12-2A0A075B6T6 113 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 IGHV1-58A0A0C4DH39 117 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 EPOPA6NHQ4 379 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 CTSGP08311 255 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 CCL4P13236 92 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 KLRB1Q12918 225 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 Q1RN00 199 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 DEFB119Q8N690 84 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 COPS9Q8WXC6 57 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 LINC00477Q96M19 166 aa3.57□□□□□ -1.84
PRKD3-210ENST00000494667 IGLV5-45A0A087WSX0 123 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 MBD3L4A6NDZ8 208 aaPredicted RBP3.56□□□□□ -1.84
PRKD3-210ENST00000494667 MBD3L3A6NE82 208 aaPredicted RBP3.56□□□□□ -1.84
PRKD3-210ENST00000494667 MBD3L5A6NJ08 208 aaPredicted RBP3.56□□□□□ -1.84
PRKD3-210ENST00000494667 FAM19A3Q7Z5A8 133 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 ZFAND2AQ8N6M9 145 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 CACNA1DQ01668 2161 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 IGHV3-21A0A0B4J1V1 117 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 TRAV21A0A0B4J279 112 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 TMEM178BH3BS89 294 aa3.56□□□□□ -1.84
PRKD3-210ENST00000494667 J3QLI3 93 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms