RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ADAT1Q9BUB4 502 aaKnown RBP1.76□□□□□ -2.13
SMC4-224ENST00000494612 XAGE1AQ9HD64 81 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 CYSLTR1Q9Y271 337 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 NOP16Q9Y3C1 178 aaKnown RBP1.76□□□□□ -2.13
SMC4-224ENST00000494612 FCGBPQ9Y6R7 5405 aaPredicted RBP1.75□□□□□ -2.13
SMC4-224ENST00000494612 IGKV1D-43A0A0B4J1Z2 117 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 PRORSD1PA6NEY8 169 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 CPSF4LA6NMK7 179 aaKnown RBP1.75□□□□□ -2.13
SMC4-224ENST00000494612 FABP5P3A8MUU1 101 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 GNRH2O43555 120 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 S1PR2O95136 353 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 ZNF682O95780 498 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 LY6G6CO95867 125 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 UCHL1P09936 223 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 ZNF728P0DKX0 622 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 PPIBP23284 216 aaKnown RBP1.75□□□□□ -2.13
SMC4-224ENST00000494612 CD24P25063 80 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 ALDH3A1P30838 453 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 HSPE1P61604 102 aaKnown RBP1.75□□□□□ -2.13
SMC4-224ENST00000494612 BLCAPP62952 87 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 C12orf74Q32Q52 190 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 ZNF826PQ6ZT77 177 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 GOLT1AQ6ZVE7 132 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 LHFPL1Q86WI0 220 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 BPIFA4PQ86YQ2 179 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 Q8NDZ9 215 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 OR51T1Q8NGJ9 327 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 OR9Q1Q8NGQ5 310 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 OR13C6PQ8NH95 151 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 RERGLQ9H628 205 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 TPT1P8Q9HAU6 139 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 BCL2L10Q9HD36 194 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 KAAG1Q9UBP8 84 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 TIMM9Q9Y5J7 89 aa1.75□□□□□ -2.13
SMC4-224ENST00000494612 KIAA1109Q2LD37 5005 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 KMT2AQ03164 3969 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 TRAPPC13A5PLN9 417 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 H7C1C5 153 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 RER1O15258 196 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 TPST1O60507 370 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 ASAH2BP0C7U1 165 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 EIF2B2P49770 351 aaKnown RBP1.74□□□□□ -2.13
SMC4-224ENST00000494612 CRYBA4P53673 196 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 LCN6P62502 163 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 SNCBQ16143 134 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 IBA57Q5T440 356 aaKnown RBP1.74□□□□□ -2.13
SMC4-224ENST00000494612 C10orf99Q6UWK7 81 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 SLC35E3Q7Z769 313 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 C4orf33Q8N1A6 199 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 OR13D1Q8NGV5 346 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 PFN4Q8NHR9 129 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 RASSF5Q8WWW0 418 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 DNAJC9Q8WXX5 260 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 MALSU1Q96EH3 234 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 DERL1Q9BUN8 251 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 C20orf27Q9GZN8 174 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 TVP23BQ9NYZ1 205 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 PYCARDQ9ULZ3 195 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 NDUFAF1Q9Y375 327 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 UFC1Q9Y3C8 167 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 RBM7Q9Y580 266 aaKnown RBP1.74□□□□□ -2.13
SMC4-224ENST00000494612 HILPDAQ9Y5L2 63 aa1.74□□□□□ -2.13
SMC4-224ENST00000494612 G3V2T6 193 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 IFNA10P01566 189 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 TFF1P04155 84 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 SULT1A3P0DMM9 295 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 SULT1A4P0DMN0 295 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 PIPP12273 146 aaPredicted RBP1.73□□□□□ -2.13
SMC4-224ENST00000494612 BRS3P32247 399 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 RPL28P46779 137 aaKnown RBP1.73□□□□□ -2.13
SMC4-224ENST00000494612 HINT1P49773 126 aaPredicted RBP1.73□□□□□ -2.13
SMC4-224ENST00000494612 INSL3P51460 131 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 DYNLT3P51808 116 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 CAV3P56539 151 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 TCTAP57738 103 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 RAB14P61106 215 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 RHOBP62745 196 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 HIST1H4AP62805 103 aaKnown RBP1.73□□□□□ -2.13
SMC4-224ENST00000494612 GNG3P63215 75 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 CDK6Q00534 326 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 RHEBQ15382 184 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 DEFB136Q30KP8 78 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 AKR1C8PQ5T2L2 129 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 Q6Q795 121 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 DYNAPQ8N1N2 210 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 STX19Q8N4C7 294 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 SMIM20Q8N5G0 67 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 LZICQ8WZA0 190 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 SPTSSAQ969W0 71 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 MRPS24Q96EL2 167 aaKnown RBP1.73□□□□□ -2.13
SMC4-224ENST00000494612 DNAJC30Q96LL9 226 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 GAFA1Q96PS6 74 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 WFDC6Q9BQY6 131 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 C19orf12Q9NSK7 152 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 SLC39A9Q9NUM3 307 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 TP73-AS1Q9UF72 201 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 SS18L2Q9UHA2 77 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 MED31Q9Y3C7 131 aa1.73□□□□□ -2.13
SMC4-224ENST00000494612 TRAV27A0A087WT01 109 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 IRGMA1A4Y4 181 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms