RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SLC25A21Q9BQT8 299 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-219ENST00000494323 SLIRPQ9GZT3 109 aaKnown RBP3.44□□□□□ -1.86
PTCD3-219ENST00000494323 AGPAT4-IT1Q9H0P7 198 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 MRPL16Q9NX20 251 aaKnown RBP3.44□□□□□ -1.86
PTCD3-219ENST00000494323 GSKIPQ9P0R6 139 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 FLVCR2Q9UPI3 526 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 PXMP4Q9Y6I8 212 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 ICOSQ9Y6W8 199 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 LY96Q9Y6Y9 160 aa3.44□□□□□ -1.86
PTCD3-219ENST00000494323 MYCBP2O75592 4640 aa3.43□□□□□ -1.86
PTCD3-219ENST00000494323 C7orf66A4D0T2 115 aa3.43□□□□□ -1.86
PTCD3-219ENST00000494323 FAM74A7A6NL05 159 aa3.43□□□□□ -1.86
PTCD3-219ENST00000494323 MPDU1O75352 247 aa3.43□□□□□ -1.86
PTCD3-219ENST00000494323 SLC25A5P05141 298 aaKnown RBP3.43□□□□□ -1.86
PTCD3-219ENST00000494323 SFTA3P0C7M3 94 aa3.43□□□□□ -1.86
PTCD3-219ENST00000494323 CXCL2P19875 107 aa3.43□□□□□ -1.86
PTCD3-219ENST00000494323 PPT1P50897 306 aa3.43□□□□□ -1.86
PTCD3-219ENST00000494323 FAM74A3Q4VXF1 159 aa3.43□□□□□ -1.86
PTCD3-219ENST00000494323 EXOC3-AS1Q8N2X6 119 aa3.43□□□□□ -1.86
PTCD3-219ENST00000494323 EIF4E3Q8N5X7 224 aaKnown RBP3.43□□□□□ -1.86
PTCD3-219ENST00000494323 BLNKQ8WV28 456 aa3.43□□□□□ -1.86
PTCD3-219ENST00000494323 MRPL32Q9BYC8 188 aaKnown RBP3.43□□□□□ -1.86
PTCD3-219ENST00000494323 PRO0255Q9UI72 69 aa3.43□□□□□ -1.86
PTCD3-219ENST00000494323 VPS13BQ7Z7G8 4022 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 TRBV19A0A075B6N1 114 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 TRGV4A0A0C4DH28 118 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 KLLNB2CW77 178 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 FNDC10F2Z333 226 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 K7EPK0 472 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 PSCAO43653 123 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 TSC22D2O75157 780 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 CST7O76096 145 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 CRYGDP07320 174 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 OR4E1P0C645 316 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 EVI2AP22794 236 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 SRIP30626 198 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 TCL1AP56279 114 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 AP3S2P59780 193 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 UBE2MP61081 183 aaKnown RBP3.42□□□□□ -1.86
PTCD3-219ENST00000494323 SLAQ13239 276 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 RGS21Q2M5E4 152 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 IAH1Q2TAA2 248 aaPredicted RBP3.42□□□□□ -1.86
PTCD3-219ENST00000494323 PRR9Q5T870 116 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 TMUB2Q71RG4 321 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 ZNF546Q86UE3 836 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 LINC01561Q8N1V8 128 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 ZNF680Q8NEM1 530 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 DEDD2Q8WXF8 326 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 FAM19A4Q96LR4 140 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 LINC00477Q96M19 166 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 ODF3Q96PU9 254 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 RCL1Q9Y2P8 373 aaKnown RBP3.42□□□□□ -1.86
PTCD3-219ENST00000494323 TIMM9Q9Y5J7 89 aa3.42□□□□□ -1.86
PTCD3-219ENST00000494323 IGHV1OR15-1A0A075B7D0 117 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 IGKV2-40A0A087WW87 121 aaPredicted RBP3.41□□□□□ -1.86
PTCD3-219ENST00000494323 LOC100131303A0A0U1RQF7 123 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 LRCOL1A6NCL2 159 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 FAM24AA6NFZ4 105 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 L7N2F9 121 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 UPK1BO75841 260 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 PTTG1O95997 202 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 IGKV2D-40P01614 121 aaPredicted RBP3.41□□□□□ -1.86
PTCD3-219ENST00000494323 PYYP10082 97 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 INPP1P49441 399 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 BCAP31P51572 246 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 TAS2R30P59541 319 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 RAB31Q13636 194 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 GUK1Q16774 197 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 TRIQKQ629K1 86 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 ZFAND2AQ8N6M9 145 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 LINC00467Q9BRT7 94 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 GGACTQ9BVM4 153 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 V9GYH0 126 aa3.41□□□□□ -1.86
PTCD3-219ENST00000494323 FAM25EA8MYX2 175 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 GNRH2O43555 120 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 NDUFB6O95139 128 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 HIST1H1EP10412 219 aaKnown RBP3.4□□□□□ -1.87
PTCD3-219ENST00000494323 CRISP2P16562 243 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 CAV2P51636 162 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 KRTAP10-5P60370 271 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 GCSAMLQ5JQS6 135 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 IBA57Q5T440 356 aaKnown RBP3.4□□□□□ -1.87
PTCD3-219ENST00000494323 TMEM78Q5T7P6 136 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 IQCF2Q8IXL9 164 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 C12orf45Q8N5I9 185 aaPredicted RBP3.4□□□□□ -1.87
PTCD3-219ENST00000494323 Q8N814 137 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 OR1L4Q8NGR5 311 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 Q8TAT8 98 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 C9orf85Q96MD7 179 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 PFDN5Q99471 154 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 TMEM70Q9BUB7 260 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 SRRQ9GZT4 340 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 C20orf85Q9H1P6 137 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 SLC39A9Q9NUM3 307 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 ZNF492Q9P255 531 aa3.4□□□□□ -1.87
PTCD3-219ENST00000494323 LSM5Q9Y4Y9 91 aaKnown RBP3.4□□□□□ -1.87
PTCD3-219ENST00000494323 CENPXA8MT69 81 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 K7EP13 123 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 ZNF253O75346 499 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms