RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 OR8A1Q8NGG7 326 aa8.11□□□□□ -1.11
PDLIM1-205ENST00000493949 MRPL53Q96EL3 112 aaKnown RBP8.11□□□□□ -1.11
PDLIM1-205ENST00000493949 TM2D2Q9BX73 214 aa8.11□□□□□ -1.11
PDLIM1-205ENST00000493949 KLK9Q9UKQ9 250 aa8.11□□□□□ -1.11
PDLIM1-205ENST00000493949 SPCS1Q9Y6A9 102 aa8.11□□□□□ -1.11
PDLIM1-205ENST00000493949 LY6LH3BQJ8 138 aa8.1□□□□□ -1.11
PDLIM1-205ENST00000493949 SH2D1AO60880 128 aa8.1□□□□□ -1.11
PDLIM1-205ENST00000493949 CD28P10747 220 aa8.1□□□□□ -1.11
PDLIM1-205ENST00000493949 CRIP1P50238 77 aa8.1□□□□□ -1.11
PDLIM1-205ENST00000493949 KLRD1Q13241 179 aa8.1□□□□□ -1.11
PDLIM1-205ENST00000493949 ERASQ7Z444 233 aa8.1□□□□□ -1.11
PDLIM1-205ENST00000493949 SGK494Q96LW2 274 aa8.1□□□□□ -1.11
PDLIM1-205ENST00000493949 PRR25Q96S07 402 aa8.1□□□□□ -1.11
PDLIM1-205ENST00000493949 ASCL2Q99929 193 aa8.1□□□□□ -1.11
PDLIM1-205ENST00000493949 F8W1H4 67 aa8.09□□□□□ -1.11
PDLIM1-205ENST00000493949 H3BUT2 72 aa8.09□□□□□ -1.11
PDLIM1-205ENST00000493949 NBR2O15453 112 aa8.09□□□□□ -1.11
PDLIM1-205ENST00000493949 GNG7O60262 68 aa8.09□□□□□ -1.11
PDLIM1-205ENST00000493949 DPM2O94777 84 aa8.09□□□□□ -1.11
PDLIM1-205ENST00000493949 IL4P05112 153 aa8.09□□□□□ -1.11
PDLIM1-205ENST00000493949 ZNF138P52744 262 aa8.09□□□□□ -1.11
PDLIM1-205ENST00000493949 CCDC144NLQ6NUI1 221 aa8.09□□□□□ -1.11
PDLIM1-205ENST00000493949 ATP6V0BQ99437 205 aa8.09□□□□□ -1.11
PDLIM1-205ENST00000493949 CITED2Q99967 270 aaPredicted RBP8.09□□□□□ -1.11
PDLIM1-205ENST00000493949 SLC50A1Q9BRV3 221 aa8.09□□□□□ -1.11
PDLIM1-205ENST00000493949 FRAS1Q86XX4 4008 aa8.09□□□□□ -1.11
PDLIM1-205ENST00000493949 IGLV11-55A0A075B6I3 123 aa8.08□□□□□ -1.12
PDLIM1-205ENST00000493949 FABP5P3A8MUU1 101 aa8.08□□□□□ -1.12
PDLIM1-205ENST00000493949 TMEM238C9JI98 176 aa8.08□□□□□ -1.12
PDLIM1-205ENST00000493949 H0Y8G0 127 aa8.08□□□□□ -1.12
PDLIM1-205ENST00000493949 NCR2O95944 276 aa8.08□□□□□ -1.12
PDLIM1-205ENST00000493949 IGHV3-48P01763 117 aa8.08□□□□□ -1.12
PDLIM1-205ENST00000493949 IGKCP01834 107 aa8.08□□□□□ -1.12
PDLIM1-205ENST00000493949 PLNP26678 52 aa8.08□□□□□ -1.12
PDLIM1-205ENST00000493949 DIAPH2-AS1Q14236 149 aa8.08□□□□□ -1.12
PDLIM1-205ENST00000493949 ODF1Q14990 250 aa8.08□□□□□ -1.12
PDLIM1-205ENST00000493949 ZNF562Q6V9R5 426 aa8.08□□□□□ -1.12
PDLIM1-205ENST00000493949 VMO1Q7Z5L0 202 aa8.08□□□□□ -1.12
PDLIM1-205ENST00000493949 AMN1Q8IY45 258 aa8.08□□□□□ -1.12
PDLIM1-205ENST00000493949 Q8N8P6 123 aa8.08□□□□□ -1.12
PDLIM1-205ENST00000493949 OR11H6Q8NGC7 330 aa8.08□□□□□ -1.12
PDLIM1-205ENST00000493949 M0R1W7 72 aa8.07□□□□□ -1.12
PDLIM1-205ENST00000493949 CNIH1O95406 144 aa8.07□□□□□ -1.12
PDLIM1-205ENST00000493949 CD24P25063 80 aa8.07□□□□□ -1.12
PDLIM1-205ENST00000493949 LY6EQ16553 131 aa8.07□□□□□ -1.12
PDLIM1-205ENST00000493949 FOXI2Q6ZQN5 318 aa8.07□□□□□ -1.12
PDLIM1-205ENST00000493949 TTC9CQ8N5M4 171 aa8.07□□□□□ -1.12
PDLIM1-205ENST00000493949 LY6G5BQ8NDX9 201 aa8.07□□□□□ -1.12
PDLIM1-205ENST00000493949 VGLL1Q99990 258 aa8.07□□□□□ -1.12
PDLIM1-205ENST00000493949 FBXL15Q9H469 300 aa8.07□□□□□ -1.12
PDLIM1-205ENST00000493949 IGHV4-4A0A075B6R2 117 aa8.06□□□□□ -1.12
PDLIM1-205ENST00000493949 TRAV12-1A0A0B4J245 112 aa8.06□□□□□ -1.12
PDLIM1-205ENST00000493949 H3BUX3 64 aa8.06□□□□□ -1.12
PDLIM1-205ENST00000493949 NPYP01303 97 aa8.06□□□□□ -1.12
PDLIM1-205ENST00000493949 HOXD3P31249 432 aaPredicted RBP8.06□□□□□ -1.12
PDLIM1-205ENST00000493949 ASPHD1Q5U4P2 390 aa8.06□□□□□ -1.12
PDLIM1-205ENST00000493949 LCNL1Q6ZST4 164 aa8.06□□□□□ -1.12
PDLIM1-205ENST00000493949 Q8N2B8 174 aa8.06□□□□□ -1.12
PDLIM1-205ENST00000493949 ZNF502Q8TBZ5 544 aa8.06□□□□□ -1.12
PDLIM1-205ENST00000493949 CHAC1Q9BUX1 264 aa8.06□□□□□ -1.12
PDLIM1-205ENST00000493949 DPM3Q9P2X0 92 aa8.06□□□□□ -1.12
PDLIM1-205ENST00000493949 LENEPQ9Y5L5 61 aa8.06□□□□□ -1.12
PDLIM1-205ENST00000493949 NPFFO15130 113 aa8.05□□□□□ -1.12
PDLIM1-205ENST00000493949 NMUP48645 174 aa8.05□□□□□ -1.12
PDLIM1-205ENST00000493949 C5orf64Q2M2E5 130 aa8.05□□□□□ -1.12
PDLIM1-205ENST00000493949 LYRM7Q5U5X0 104 aa8.05□□□□□ -1.12
PDLIM1-205ENST00000493949 CEND1Q8N111 149 aa8.05□□□□□ -1.12
PDLIM1-205ENST00000493949 MTURNQ8N3F0 131 aa8.05□□□□□ -1.12
PDLIM1-205ENST00000493949 MRAP2Q96G30 205 aa8.05□□□□□ -1.12
PDLIM1-205ENST00000493949 VCX2Q9H322 139 aa8.05□□□□□ -1.12
PDLIM1-205ENST00000493949 C21orf62Q9NYP8 219 aa8.05□□□□□ -1.12
PDLIM1-205ENST00000493949 ONECUT1Q9UBC0 465 aa8.05□□□□□ -1.12
PDLIM1-205ENST00000493949 A0A1B0GWB2 263 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 TMEM213A2RRL7 107 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 E9PLD3 99 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 H3BTX0 84 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 TNFRSF6BO95407 300 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 PPP1R17O96001 155 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 PF4V1P10720 104 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 SAA4P35542 130 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 EBI3Q14213 229 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 MINOS1Q5TGZ0 78 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 ATP6V0E2Q8NHE4 81 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 RNF185Q96GF1 192 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 C8orf49Q96NF6 230 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 TPPP3Q9BW30 176 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 ZNF702PQ9H963 129 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 TP73-AS1Q9UF72 201 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 HHLA3Q9XRX5 114 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 MINOS1-NBL1R4GNA1 71 aa8.04□□□□□ -1.12
PDLIM1-205ENST00000493949 IGHV3-72A0A0B4J1Y9 119 aa8.03□□□□□ -1.12
PDLIM1-205ENST00000493949 LOC389332A0A1B0GUA5 103 aa8.03□□□□□ -1.12
PDLIM1-205ENST00000493949 TMEM238LA0A1B0GVL6 79 aa8.03□□□□□ -1.12
PDLIM1-205ENST00000493949 A6NJY4 79 aa8.03□□□□□ -1.12
PDLIM1-205ENST00000493949 NCBP2LA6PVI3 153 aaKnown RBP8.03□□□□□ -1.12
PDLIM1-205ENST00000493949 ODF3BA8MYP8 253 aa8.03□□□□□ -1.12
PDLIM1-205ENST00000493949 MED14OSP0DP75 135 aa8.03□□□□□ -1.12
PDLIM1-205ENST00000493949 EGR2P11161 476 aaPredicted RBP8.03□□□□□ -1.12
PDLIM1-205ENST00000493949 CNTFRP26992 372 aa8.03□□□□□ -1.12
PDLIM1-205ENST00000493949 MYOZ3Q8TDC0 251 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms