RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 TRAV12-2A0A075B6T6 113 aa8.97□□□□□ -0.97
BRCA1-222ENST00000493919 TCRBV4S1A1TA0A5B7 111 aa8.97□□□□□ -0.97
BRCA1-222ENST00000493919 HAX1O00165 279 aa8.97□□□□□ -0.97
BRCA1-222ENST00000493919 IGKCP01834 107 aa8.97□□□□□ -0.97
BRCA1-222ENST00000493919 C17orf58Q2M2W7 97 aa8.97□□□□□ -0.97
BRCA1-222ENST00000493919 HCP5Q6MZN7 132 aa8.97□□□□□ -0.97
BRCA1-222ENST00000493919 C9orf139Q6ZV77 190 aa8.97□□□□□ -0.97
BRCA1-222ENST00000493919 MRPL55Q7Z7F7 128 aaKnown RBP8.97□□□□□ -0.97
BRCA1-222ENST00000493919 LINC00311Q8N616 119 aa8.97□□□□□ -0.97
BRCA1-222ENST00000493919 CCDC140Q96MF4 163 aa8.97□□□□□ -0.97
BRCA1-222ENST00000493919 HDHD3Q9BSH5 251 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-222ENST00000493919 SSSCA1O60232 199 aa8.96□□□□□ -0.97
BRCA1-222ENST00000493919 TREML4Q6UXN2 200 aa8.96□□□□□ -0.97
BRCA1-222ENST00000493919 GVQW1Q8N7I0 195 aa8.96□□□□□ -0.97
BRCA1-222ENST00000493919 TRAV8-1A0A0A6YYK1 113 aa8.95□□□□□ -0.98
BRCA1-222ENST00000493919 IGHV3-43A0A0B4J1X8 118 aa8.95□□□□□ -0.98
BRCA1-222ENST00000493919 C9JCJ5 164 aa8.95□□□□□ -0.98
BRCA1-222ENST00000493919 C12orf77C9JDV5 145 aa8.95□□□□□ -0.98
BRCA1-222ENST00000493919 C11orf94C9JXX5 98 aa8.95□□□□□ -0.98
BRCA1-222ENST00000493919 IGF1P05019 195 aa8.95□□□□□ -0.98
BRCA1-222ENST00000493919 IGHV3-43DP0DP04 118 aa8.95□□□□□ -0.98
BRCA1-222ENST00000493919 LINC01561Q8N1V8 128 aa8.95□□□□□ -0.98
BRCA1-222ENST00000493919 LEAP2Q969E1 77 aa8.95□□□□□ -0.98
BRCA1-222ENST00000493919 ZNF256Q9Y2P7 627 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-222ENST00000493919 F11RQ9Y624 299 aaKnown RBP8.95□□□□□ -0.98
BRCA1-222ENST00000493919 P01737 135 aa8.95□□□□□ -0.98
BRCA1-222ENST00000493919 HERV-K104P61576 105 aa8.95□□□□□ -0.98
BRCA1-222ENST00000493919 FBN1P35555 2871 aaKnown RBP8.95□□□□□ -0.98
BRCA1-222ENST00000493919 DNAJC9-AS1A6NH13 148 aa8.94□□□□□ -0.98
BRCA1-222ENST00000493919 USP17L23D6RBM5 183 aa8.94□□□□□ -0.98
BRCA1-222ENST00000493919 TMEM158Q8WZ71 300 aa8.94□□□□□ -0.98
BRCA1-222ENST00000493919 CHAC1Q9BUX1 264 aa8.94□□□□□ -0.98
BRCA1-222ENST00000493919 ESM1Q9NQ30 184 aa8.94□□□□□ -0.98
BRCA1-222ENST00000493919 Q9UF83 564 aa8.94□□□□□ -0.98
BRCA1-222ENST00000493919 A0A087WWL8 130 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 ODF3BA8MYP8 253 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 LINC01619G3V211 115 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 K7ERJ3 54 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 ATOX1O00244 68 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 HOXA3O43365 443 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-222ENST00000493919 PPYP01298 95 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 CGB3P0DN86 165 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 CGB7P0DN87 165 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 GNB1P62873 340 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 ARFRP1Q13795 201 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 LGALS9BQ3B8N2 356 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 LGALS9CQ6DKI2 356 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 VKORC1L1Q8N0U8 176 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 ZNRD1Q9P1U0 126 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 SERP1Q9Y6X1 66 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 SMIM26A0A096LP01 95 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 IZUMO1RA6ND01 250 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 IL4P05112 153 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 NPPCP23582 126 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 FAM53AQ6NSI3 398 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-222ENST00000493919 Q6ZPA2 131 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 LINC00482Q8N8I6 264 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 COPS9Q8WXC6 57 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 OSTCQ9NRP0 149 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 V9GYV3 84 aa8.93□□□□□ -0.98
BRCA1-222ENST00000493919 A0A0U1RQV1 116 aa8.92□□□□□ -0.98
BRCA1-222ENST00000493919 IGHV4-59P01825 116 aa8.92□□□□□ -0.98
BRCA1-222ENST00000493919 MGST1P10620 155 aaKnown RBP8.92□□□□□ -0.98
BRCA1-222ENST00000493919 PI3P19957 117 aa8.92□□□□□ -0.98
BRCA1-222ENST00000493919 SP6Q3SY56 376 aa8.92□□□□□ -0.98
BRCA1-222ENST00000493919 Q6ZRU5 148 aa8.92□□□□□ -0.98
BRCA1-222ENST00000493919 LINC00574Q9H8X3 128 aa8.92□□□□□ -0.98
BRCA1-222ENST00000493919 TIMM23O14925 209 aa8.92□□□□□ -0.98
BRCA1-222ENST00000493919 GCHFRP30047 84 aa8.92□□□□□ -0.98
BRCA1-222ENST00000493919 CXCL5P42830 114 aa8.92□□□□□ -0.98
BRCA1-222ENST00000493919 Q6YL49 198 aa8.92□□□□□ -0.98
BRCA1-222ENST00000493919 SSMEM1Q8WWF3 244 aa8.92□□□□□ -0.98
BRCA1-222ENST00000493919 DSCR8Q96T75 97 aa8.92□□□□□ -0.98
BRCA1-222ENST00000493919 C15orf62A8K5M9 175 aa8.91□□□□□ -0.98
BRCA1-222ENST00000493919 H3BTX0 84 aa8.91□□□□□ -0.98
BRCA1-222ENST00000493919 IGLV1-47P01700 117 aa8.91□□□□□ -0.98
BRCA1-222ENST00000493919 LOXL3P58215 753 aa8.91□□□□□ -0.98
BRCA1-222ENST00000493919 DYNAPQ8N1N2 210 aa8.91□□□□□ -0.98
BRCA1-222ENST00000493919 MGST2Q99735 147 aa8.91□□□□□ -0.98
BRCA1-222ENST00000493919 TRGV11A0A075B6L2 103 aa8.9□□□□□ -0.98
BRCA1-222ENST00000493919 PIGBOS1A0A0B4J2F0 54 aa8.9□□□□□ -0.98
BRCA1-222ENST00000493919 SMIM27A0A1W2PRY6 76 aa8.9□□□□□ -0.98
BRCA1-222ENST00000493919 H3BUX3 64 aa8.9□□□□□ -0.98
BRCA1-222ENST00000493919 TCL1BO95988 128 aa8.9□□□□□ -0.98
BRCA1-222ENST00000493919 HOXD3P31249 432 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-222ENST00000493919 MINOS1Q5TGZ0 78 aa8.9□□□□□ -0.98
BRCA1-222ENST00000493919 DRAM1Q8N682 238 aa8.9□□□□□ -0.98
BRCA1-222ENST00000493919 C16orf95Q9H693 158 aa8.9□□□□□ -0.98
BRCA1-222ENST00000493919 DPM3Q9P2X0 92 aa8.9□□□□□ -0.98
BRCA1-222ENST00000493919 HHLA3Q9XRX5 114 aa8.9□□□□□ -0.98
BRCA1-222ENST00000493919 AMMECR1Q9Y4X0 333 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-222ENST00000493919 MINOS1-NBL1R4GNA1 71 aa8.9□□□□□ -0.98
BRCA1-222ENST00000493919 TRBV6-6A0A0A6YYG2 114 aa8.9□□□□□ -0.99
BRCA1-222ENST00000493919 H3BS24 57 aa8.9□□□□□ -0.99
BRCA1-222ENST00000493919 BUB1B-PAK6H3BSN5 160 aa8.9□□□□□ -0.99
BRCA1-222ENST00000493919 LY6EQ16553 131 aa8.9□□□□□ -0.99
BRCA1-222ENST00000493919 KRTAP24-1Q3LI83 254 aa8.9□□□□□ -0.99
BRCA1-222ENST00000493919 TMEM30BQ3MIR4 351 aa8.9□□□□□ -0.99
BRCA1-222ENST00000493919 GTSCR1Q86UQ5 136 aa8.9□□□□□ -0.99
BRCA1-222ENST00000493919 BRK1Q8WUW1 75 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms