RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 RNASE1P07998 156 aaKnown RBP8.04□□□□□ -1.12
PHACTR4-204ENST00000493669 LGALS9BQ3B8N2 356 aa8.04□□□□□ -1.12
PHACTR4-204ENST00000493669 KHDC1LQ5JSQ8 128 aa8.04□□□□□ -1.12
PHACTR4-204ENST00000493669 LGALS9CQ6DKI2 356 aa8.04□□□□□ -1.12
PHACTR4-204ENST00000493669 LURAP1LQ8IV03 231 aa8.04□□□□□ -1.12
PHACTR4-204ENST00000493669 POM121L12Q8N7R1 296 aa8.04□□□□□ -1.12
PHACTR4-204ENST00000493669 ESM1Q9NQ30 184 aa8.04□□□□□ -1.12
PHACTR4-204ENST00000493669 GAS8-AS1O95177 125 aa8.04□□□□□ -1.12
PHACTR4-204ENST00000493669 IGLL1P15814 213 aa8.04□□□□□ -1.12
PHACTR4-204ENST00000493669 C20orf78Q9BR46 151 aa8.04□□□□□ -1.12
PHACTR4-204ENST00000493669 SNHG12Q9BXW3 62 aa8.04□□□□□ -1.12
PHACTR4-204ENST00000493669 K7EMI3 77 aa8.03□□□□□ -1.12
PHACTR4-204ENST00000493669 IFI27L1Q96BM0 104 aa8.03□□□□□ -1.12
PHACTR4-204ENST00000493669 TRAV12-3A0A0B4J271 114 aa8.03□□□□□ -1.12
PHACTR4-204ENST00000493669 GATA1P15976 413 aaPredicted RBP8.03□□□□□ -1.12
PHACTR4-204ENST00000493669 AMTNQ6UX39 209 aa8.03□□□□□ -1.12
PHACTR4-204ENST00000493669 DLX4Q92988 240 aaPredicted RBP8.03□□□□□ -1.12
PHACTR4-204ENST00000493669 EREGO14944 169 aa8.02□□□□□ -1.13
PHACTR4-204ENST00000493669 FHL3Q13643 280 aa8.02□□□□□ -1.13
PHACTR4-204ENST00000493669 MAJINQ3KP22 176 aa8.02□□□□□ -1.13
PHACTR4-204ENST00000493669 DYNLRB2Q8TF09 96 aa8.02□□□□□ -1.13
PHACTR4-204ENST00000493669 TRAV25A0A0B4J276 109 aa8.02□□□□□ -1.13
PHACTR4-204ENST00000493669 CD7P09564 240 aa8.02□□□□□ -1.13
PHACTR4-204ENST00000493669 HLA-DRB4P13762 266 aa8.02□□□□□ -1.13
PHACTR4-204ENST00000493669 HNRNPA3P51991 378 aaKnown RBP8.02□□□□□ -1.13
PHACTR4-204ENST00000493669 Q6ZN92 141 aa8.02□□□□□ -1.13
PHACTR4-204ENST00000493669 C9orf85Q96MD7 179 aa8.02□□□□□ -1.13
PHACTR4-204ENST00000493669 HLA-DRB4X5D2U9 266 aa8.02□□□□□ -1.13
PHACTR4-204ENST00000493669 IGHV1OR15-1A0A075B7D0 117 aa8.01□□□□□ -1.13
PHACTR4-204ENST00000493669 LAGE3Q14657 143 aa8.01□□□□□ -1.13
PHACTR4-204ENST00000493669 SMIM2Q9BVW6 85 aa8.01□□□□□ -1.13
PHACTR4-204ENST00000493669 MRPS16Q9Y3D3 137 aaKnown RBP8.01□□□□□ -1.13
PHACTR4-204ENST00000493669 TRAV26-2A0A0B4J265 109 aa8.01□□□□□ -1.13
PHACTR4-204ENST00000493669 IGHV3-16A0A0C4DH30 117 aa8.01□□□□□ -1.13
PHACTR4-204ENST00000493669 TMEM61Q8N0U2 210 aa8.01□□□□□ -1.13
PHACTR4-204ENST00000493669 C14orf178Q8N769 122 aaPredicted RBP8.01□□□□□ -1.13
PHACTR4-204ENST00000493669 ZNF418Q8TF45 676 aaPredicted RBP8.01□□□□□ -1.13
PHACTR4-204ENST00000493669 SPAG8Q99932 426 aaPredicted RBP8.01□□□□□ -1.13
PHACTR4-204ENST00000493669 PDZD2O15018 2839 aa8.01□□□□□ -1.13
PHACTR4-204ENST00000493669 SMIM17P0DL12 118 aa8.01□□□□□ -1.13
PHACTR4-204ENST00000493669 DEFB114Q30KQ6 69 aa8.01□□□□□ -1.13
PHACTR4-204ENST00000493669 SYT8Q8NBV8 401 aa8.01□□□□□ -1.13
PHACTR4-204ENST00000493669 FLNAP21333 2647 aaKnown RBP8□□□□□ -1.13
PHACTR4-204ENST00000493669 TRGV11A0A075B6L2 103 aa8□□□□□ -1.13
PHACTR4-204ENST00000493669 H0Y8G0 127 aa8□□□□□ -1.13
PHACTR4-204ENST00000493669 SUMO2P61956 95 aaKnown RBP8□□□□□ -1.13
PHACTR4-204ENST00000493669 RPL32P62910 135 aaKnown RBP8□□□□□ -1.13
PHACTR4-204ENST00000493669 SPINK13Q1W4C9 94 aa8□□□□□ -1.13
PHACTR4-204ENST00000493669 GOLT1BQ9Y3E0 138 aa8□□□□□ -1.13
PHACTR4-204ENST00000493669 KIF25-AS1Q9Y6Z4 181 aa8□□□□□ -1.13
PHACTR4-204ENST00000493669 ATP5LO75964 103 aa8□□□□□ -1.13
PHACTR4-204ENST00000493669 DEFB131AP59861 70 aa8□□□□□ -1.13
PHACTR4-204ENST00000493669 RASL10AQ92737 203 aa8□□□□□ -1.13
PHACTR4-204ENST00000493669 RAX2Q96IS3 184 aa8□□□□□ -1.13
PHACTR4-204ENST00000493669 TSSC4Q9Y5U2 329 aaPredicted RBP8□□□□□ -1.13
PHACTR4-204ENST00000493669 CCDC168Q8NDH2 2452 aa8□□□□□ -1.13
PHACTR4-204ENST00000493669 hDV102S1A0JD36 115 aa7.99□□□□□ -1.13
PHACTR4-204ENST00000493669 H3BMM0 161 aa7.99□□□□□ -1.13
PHACTR4-204ENST00000493669 IGKV3-20P01619 116 aa7.99□□□□□ -1.13
PHACTR4-204ENST00000493669 HILS1P60008 231 aa7.99□□□□□ -1.13
PHACTR4-204ENST00000493669 ORMDL2Q53FV1 153 aa7.99□□□□□ -1.13
PHACTR4-204ENST00000493669 TMEM158Q8WZ71 300 aa7.99□□□□□ -1.13
PHACTR4-204ENST00000493669 CLUHP3Q96NS8 147 aa7.99□□□□□ -1.13
PHACTR4-204ENST00000493669 DUX3Q96PT4 197 aa7.99□□□□□ -1.13
PHACTR4-204ENST00000493669 MYO9AB2RTY4 2548 aa7.99□□□□□ -1.13
PHACTR4-204ENST00000493669 TRAV12-2A0A075B6T6 113 aa7.99□□□□□ -1.13
PHACTR4-204ENST00000493669 MGPP08493 103 aa7.99□□□□□ -1.13
PHACTR4-204ENST00000493669 TLN2Q9Y4G6 2542 aa7.99□□□□□ -1.13
PHACTR4-204ENST00000493669 NDUFA7O95182 113 aa7.99□□□□□ -1.13
PHACTR4-204ENST00000493669 FXYD7P58549 80 aa7.99□□□□□ -1.13
PHACTR4-204ENST00000493669 LINC00315P59091 139 aa7.99□□□□□ -1.13
PHACTR4-204ENST00000493669 LINC01006Q8NI28 216 aa7.99□□□□□ -1.13
PHACTR4-204ENST00000493669 HELZ2Q9BYK8 2649 aaKnown RBP7.98□□□□□ -1.13
PHACTR4-204ENST00000493669 CCL24O00175 119 aa7.98□□□□□ -1.13
PHACTR4-204ENST00000493669 Q8N1Y9 231 aa7.98□□□□□ -1.13
PHACTR4-204ENST00000493669 JMJD8Q96S16 334 aa7.98□□□□□ -1.13
PHACTR4-204ENST00000493669 PMCHL2Q9BQD1 86 aa7.98□□□□□ -1.13
PHACTR4-204ENST00000493669 MAP6D1Q9H9H5 199 aa7.98□□□□□ -1.13
PHACTR4-204ENST00000493669 CD28P10747 220 aa7.98□□□□□ -1.13
PHACTR4-204ENST00000493669 SLC25A34Q6PIV7 304 aa7.98□□□□□ -1.13
PHACTR4-204ENST00000493669 KNCNA6PVL3 124 aa7.97□□□□□ -1.13
PHACTR4-204ENST00000493669 SPRY2O43597 315 aa7.97□□□□□ -1.13
PHACTR4-204ENST00000493669 MCRIP2Q9BUT9 160 aaKnown RBP7.97□□□□□ -1.13
PHACTR4-204ENST00000493669 LINC01549A6NIU2 74 aa7.97□□□□□ -1.13
PHACTR4-204ENST00000493669 NUTF2P61970 127 aaKnown RBP7.97□□□□□ -1.13
PHACTR4-204ENST00000493669 CD300EQ496F6 205 aaPredicted RBP7.97□□□□□ -1.13
PHACTR4-204ENST00000493669 LINC00467Q9BRT7 94 aa7.97□□□□□ -1.13
PHACTR4-204ENST00000493669 UNC79Q9P2D8 2635 aa7.97□□□□□ -1.13
PHACTR4-204ENST00000493669 A0A1B0GV90 55 aa7.97□□□□□ -1.13
PHACTR4-204ENST00000493669 G0S2P27469 103 aa7.97□□□□□ -1.13
PHACTR4-204ENST00000493669 MUC4Q99102 2169 aa7.97□□□□□ -1.13
PHACTR4-204ENST00000493669 ZNF256Q9Y2P7 627 aaPredicted RBP7.97□□□□□ -1.13
PHACTR4-204ENST00000493669 TCAPO15273 167 aa7.96□□□□□ -1.14
PHACTR4-204ENST00000493669 NUDT3O95989 172 aa7.96□□□□□ -1.14
PHACTR4-204ENST00000493669 PIK3CD-AS1Q5SR53 167 aa7.96□□□□□ -1.14
PHACTR4-204ENST00000493669 CITED2Q99967 270 aaPredicted RBP7.96□□□□□ -1.14
PHACTR4-204ENST00000493669 ZMAT4Q9H898 229 aa7.96□□□□□ -1.14
PHACTR4-204ENST00000493669 MDFICQ9P1T7 246 aa7.96□□□□□ -1.14
PHACTR4-204ENST00000493669 SONP18583 2426 aaKnown RBP7.96□□□□□ -1.14
PHACTR4-204ENST00000493669 COX8AP10176 69 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms