RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 PQLC2Q6ZP29 291 aa14.05□□□□□ -0.16
PFDN4-205ENST00000493356 NDFIP1Q9BT67 221 aa14.05□□□□□ -0.16
PFDN4-205ENST00000493356 TAAR5O14804 337 aa14.04□□□□□ -0.16
PFDN4-205ENST00000493356 RNASE3P12724 160 aaKnown RBP14.04□□□□□ -0.16
PFDN4-205ENST00000493356 Q8N976 141 aa14.04□□□□□ -0.16
PFDN4-205ENST00000493356 SCGB1C1Q8TD33 95 aa14.04□□□□□ -0.16
PFDN4-205ENST00000493356 RNF222A6NCQ9 220 aa14.03□□□□□ -0.16
PFDN4-205ENST00000493356 GCGP01275 180 aa14.03□□□□□ -0.16
PFDN4-205ENST00000493356 CCDC32Q9BV29 185 aa14.03□□□□□ -0.16
PFDN4-205ENST00000493356 PARLQ9H300 379 aa14.03□□□□□ -0.16
PFDN4-205ENST00000493356 Q9UF83 564 aa14.03□□□□□ -0.16
PFDN4-205ENST00000493356 HSPB11Q9Y547 144 aa14.03□□□□□ -0.16
PFDN4-205ENST00000493356 A0A087WWC5 75 aa14.02□□□□□ -0.17
PFDN4-205ENST00000493356 CYCSP99999 105 aaKnown RBP14.02□□□□□ -0.17
PFDN4-205ENST00000493356 ZFP2Q6ZN57 461 aa14.02□□□□□ -0.17
PFDN4-205ENST00000493356 CYB561D1Q8N8Q1 229 aa14.02□□□□□ -0.17
PFDN4-205ENST00000493356 RMI2Q96E14 147 aa14.02□□□□□ -0.17
PFDN4-205ENST00000493356 DNAJC30Q96LL9 226 aa14.02□□□□□ -0.17
PFDN4-205ENST00000493356 SMIM3Q9BZL3 60 aa14.02□□□□□ -0.17
PFDN4-205ENST00000493356 SERTM2A0A1B0GWG4 89 aa14.01□□□□□ -0.17
PFDN4-205ENST00000493356 A0A1W2PPV4 95 aa14.01□□□□□ -0.17
PFDN4-205ENST00000493356 IGKV2D-24A0A075B6R9 120 aa14□□□□□ -0.17
PFDN4-205ENST00000493356 HMGB3O15347 200 aaKnown RBP14□□□□□ -0.17
PFDN4-205ENST00000493356 IGLV2-8P01709 118 aa14□□□□□ -0.17
PFDN4-205ENST00000493356 ACOT6Q3I5F7 207 aaPredicted RBP14□□□□□ -0.17
PFDN4-205ENST00000493356 MZT2BQ6NZ67 158 aa14□□□□□ -0.17
PFDN4-205ENST00000493356 OR2T35Q8NGX2 323 aa14□□□□□ -0.17
PFDN4-205ENST00000493356 PPP1R1CQ8WVI7 109 aa14□□□□□ -0.17
PFDN4-205ENST00000493356 A8MWV9 139 aa13.99□□□□□ -0.17
PFDN4-205ENST00000493356 TCRAP04437 139 aa13.99□□□□□ -0.17
PFDN4-205ENST00000493356 RAB2AP61019 212 aa13.99□□□□□ -0.17
PFDN4-205ENST00000493356 LINC00479Q96M42 142 aa13.99□□□□□ -0.17
PFDN4-205ENST00000493356 SAMD10Q9BYL1 202 aa13.99□□□□□ -0.17
PFDN4-205ENST00000493356 PSG8Q9UQ74 426 aa13.99□□□□□ -0.17
PFDN4-205ENST00000493356 IGLV2-11P01706 119 aa13.98□□□□□ -0.17
PFDN4-205ENST00000493356 H2BFSP57053 126 aa13.98□□□□□ -0.17
PFDN4-205ENST00000493356 SMUG1Q53HV7 270 aa13.98□□□□□ -0.17
PFDN4-205ENST00000493356 NIT1Q86X76 327 aa13.98□□□□□ -0.17
PFDN4-205ENST00000493356 C5orf17Q8NAS9 161 aa13.98□□□□□ -0.17
PFDN4-205ENST00000493356 KLK12Q9UKR0 248 aa13.98□□□□□ -0.17
PFDN4-205ENST00000493356 URGCP-MRPS24S4R325 110 aa13.98□□□□□ -0.17
PFDN4-205ENST00000493356 ARL14EPLP0DKL9 152 aa13.97□□□□□ -0.17
PFDN4-205ENST00000493356 RPL12P30050 165 aaKnown RBP13.97□□□□□ -0.17
PFDN4-205ENST00000493356 LGALSLQ3ZCW2 172 aaPredicted RBP13.97□□□□□ -0.17
PFDN4-205ENST00000493356 ZFP69Q49AA0 526 aa13.97□□□□□ -0.17
PFDN4-205ENST00000493356 PIK3CD-AS1Q5SR53 167 aa13.97□□□□□ -0.17
PFDN4-205ENST00000493356 C14orf178Q8N769 122 aaPredicted RBP13.97□□□□□ -0.17
PFDN4-205ENST00000493356 K7EQM0 130 aa13.96□□□□□ -0.17
PFDN4-205ENST00000493356 SEC11BP0C7V7 166 aa13.96□□□□□ -0.17
PFDN4-205ENST00000493356 FGF8P55075 233 aaPredicted RBP13.96□□□□□ -0.17
PFDN4-205ENST00000493356 FLI1Q01543 452 aaPredicted RBP13.96□□□□□ -0.17
PFDN4-205ENST00000493356 UFSP1Q6NVU6 142 aa13.96□□□□□ -0.17
PFDN4-205ENST00000493356 JPT2Q9H910 190 aa13.96□□□□□ -0.17
PFDN4-205ENST00000493356 WFDC1Q9HC57 220 aa13.96□□□□□ -0.17
PFDN4-205ENST00000493356 MPC2O95563 127 aa13.95□□□□□ -0.18
PFDN4-205ENST00000493356 PRNTQ86SH4 94 aa13.95□□□□□ -0.18
PFDN4-205ENST00000493356 OR10G9Q8NGN4 311 aa13.95□□□□□ -0.18
PFDN4-205ENST00000493356 OR10G7Q8NGN6 311 aa13.95□□□□□ -0.18
PFDN4-205ENST00000493356 UBE2WQ96B02 151 aa13.95□□□□□ -0.18
PFDN4-205ENST00000493356 IGKV3D-20A0A0C4DH25 116 aa13.94□□□□□ -0.18
PFDN4-205ENST00000493356 S100A4P26447 101 aaKnown RBP13.94□□□□□ -0.18
PFDN4-205ENST00000493356 ATRAIDQ6UW56 229 aa13.94□□□□□ -0.18
PFDN4-205ENST00000493356 ENKURQ8TC29 256 aa13.94□□□□□ -0.18
PFDN4-205ENST00000493356 PET100P0DJ07 73 aa13.93□□□□□ -0.18
PFDN4-205ENST00000493356 RPL37AP61513 92 aaKnown RBP13.93□□□□□ -0.18
PFDN4-205ENST00000493356 PKHD1L1Q86WI1 4243 aa13.92□□□□□ -0.18
PFDN4-205ENST00000493356 STAG3L2P0CL84 134 aa13.92□□□□□ -0.18
PFDN4-205ENST00000493356 STAG3L3P0CL85 134 aa13.92□□□□□ -0.18
PFDN4-205ENST00000493356 CDC34P49427 236 aaPredicted RBP13.92□□□□□ -0.18
PFDN4-205ENST00000493356 HNRNPA3P51991 378 aaKnown RBP13.92□□□□□ -0.18
PFDN4-205ENST00000493356 SUN5Q8TC36 379 aa13.92□□□□□ -0.18
PFDN4-205ENST00000493356 EPDR1Q9UM22 224 aa13.92□□□□□ -0.18
PFDN4-205ENST00000493356 A0A087WX48 190 aa13.91□□□□□ -0.18
PFDN4-205ENST00000493356 ASIPP42127 132 aa13.91□□□□□ -0.18
PFDN4-205ENST00000493356 SUMO1P63165 101 aaKnown RBP13.91□□□□□ -0.18
PFDN4-205ENST00000493356 ELOBQ15370 118 aa13.91□□□□□ -0.18
PFDN4-205ENST00000493356 SAPCD1Q5SSQ6 148 aa13.91□□□□□ -0.18
PFDN4-205ENST00000493356 DAZAP1Q96EP5 407 aaKnown RBP13.91□□□□□ -0.18
PFDN4-205ENST00000493356 CHCHD7Q9BUK0 85 aa13.91□□□□□ -0.18
PFDN4-205ENST00000493356 IL36BQ9NZH7 164 aa13.91□□□□□ -0.18
PFDN4-205ENST00000493356 RHODO00212 210 aa13.9□□□□□ -0.18
PFDN4-205ENST00000493356 GCHFRP30047 84 aa13.9□□□□□ -0.18
PFDN4-205ENST00000493356 C14orf177Q52M58 125 aa13.9□□□□□ -0.18
PFDN4-205ENST00000493356 DMRTA1Q5VZB9 504 aa13.9□□□□□ -0.18
PFDN4-205ENST00000493356 RAB24Q969Q5 203 aa13.89□□□□□ -0.19
PFDN4-205ENST00000493356 INMT-MINDY4F8WBC2 141 aa13.88□□□□□ -0.19
PFDN4-205ENST00000493356 H3BVH4 76 aa13.88□□□□□ -0.19
PFDN4-205ENST00000493356 Q0VG73 95 aa13.88□□□□□ -0.19
PFDN4-205ENST00000493356 OR2G3Q8NGZ4 309 aa13.88□□□□□ -0.19
PFDN4-205ENST00000493356 FABP5P3A8MUU1 101 aa13.87□□□□□ -0.19
PFDN4-205ENST00000493356 FAM74A4Q5TZK3 123 aa13.87□□□□□ -0.19
PFDN4-205ENST00000493356 C1orf43Q9BWL3 253 aa13.87□□□□□ -0.19
PFDN4-205ENST00000493356 KCNIP4Q6PIL6 250 aa13.86□□□□□ -0.19
PFDN4-205ENST00000493356 TRAV34A0A0B4J273 112 aa13.85□□□□□ -0.19
PFDN4-205ENST00000493356 B4DEV8 164 aa13.85□□□□□ -0.19
PFDN4-205ENST00000493356 TMEM167BQ9NRX6 74 aa13.85□□□□□ -0.19
PFDN4-205ENST00000493356 ARL2-SNX15V9GYD0 113 aa13.85□□□□□ -0.19
PFDN4-205ENST00000493356 A0A087WWL8 130 aa13.84□□□□□ -0.19
PFDN4-205ENST00000493356 SSNA1O43805 119 aa13.84□□□□□ -0.19
PFDN4-205ENST00000493356 ARMS2P0C7Q2 107 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms