RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 CFAP126Q5VTH2 177 aa4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 EIF5AL1Q6IS14 154 aaKnown RBP4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 NHLRC2Q8NBF2 726 aa4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 OR4C5Q8NGB2 326 aa4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 Q9H8V8 135 aa4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 MANBALQ9NQG1 85 aa4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 GNG13Q9P2W3 67 aa4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 BOLA1Q9Y3E2 137 aa4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 HSPG2P98160 4391 aa4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 TRGV4A0A0C4DH28 118 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 LOC100131303A0A0U1RQF7 123 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 NBDYA0A0U1RRE5 68 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 GRIFINA4D1Z8 144 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 B4DEV8 164 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 K7EQD1 137 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 M0R036 132 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 IGLV2-8P01709 118 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 ORM1P02763 201 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 S100A9P06702 114 aaKnown RBP4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 GATA1P15976 413 aaPredicted RBP4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 SLAQ13239 276 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 LINC01559Q495D7 138 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 FAM162BQ5T6X4 162 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 LYPD5Q6UWN5 251 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 Q6ZSN1 163 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 BAGE2Q86Y30 109 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 C11orf52Q96A22 123 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 UPK3BQ9BT76 320 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 DERL1Q9BUN8 251 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 KRTAP1-5Q9BYS1 174 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 JPT2Q9H910 190 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 SCRT2Q9NQ03 307 aa4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 MRPS16Q9Y3D3 137 aaKnown RBP4.94□□□□□ -1.62
PDLIM1-204ENST00000492511 DNAH8Q96JB1 4490 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 TMSB15BA0A087X1C1 80 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 A0A1B0GVY2 172 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 RAB19A4D1S5 217 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 ARMS2P0C7Q2 107 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 GYPEP15421 78 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 ASIPP42127 132 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 RPL35P42766 123 aaKnown RBP4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 RPL19P84098 196 aaKnown RBP4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 KIAA1109Q2LD37 5005 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 DMRTA1Q5VZB9 504 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 UFSP1Q6NVU6 142 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 ALKAL2Q6UX46 152 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 LINC00336Q6ZUF6 198 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 SLC25A29Q8N8R3 303 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 LYPD6BQ8NI32 183 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 SAMD10Q9BYL1 202 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 IL36BQ9NZH7 164 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 ICOSQ9Y6W8 199 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 NACAE9PAV3 2078 aa4.93□□□□□ -1.62
PDLIM1-204ENST00000492511 IGHV3-73A0A0B4J1V6 119 aa4.92□□□□□ -1.62
PDLIM1-204ENST00000492511 H3BVH4 76 aa4.92□□□□□ -1.62
PDLIM1-204ENST00000492511 S100A4P26447 101 aaKnown RBP4.92□□□□□ -1.62
PDLIM1-204ENST00000492511 MEF2BQ02080 365 aaPredicted RBP4.92□□□□□ -1.62
PDLIM1-204ENST00000492511 MRPL23Q16540 153 aaKnown RBP4.92□□□□□ -1.62
PDLIM1-204ENST00000492511 PIK3CD-AS1Q5SR53 167 aa4.92□□□□□ -1.62
PDLIM1-204ENST00000492511 NEGR1Q7Z3B1 354 aa4.92□□□□□ -1.62
PDLIM1-204ENST00000492511 TXNDC17Q9BRA2 123 aa4.92□□□□□ -1.62
PDLIM1-204ENST00000492511 PARLQ9H300 379 aa4.92□□□□□ -1.62
PDLIM1-204ENST00000492511 Q9UF83 564 aa4.92□□□□□ -1.62
PDLIM1-204ENST00000492511 MUC4Q99102 2169 aa4.92□□□□□ -1.62
PDLIM1-204ENST00000492511 TRBV20OR9-2A0A075B6H5 130 aa4.91□□□□□ -1.62
PDLIM1-204ENST00000492511 TRBV6-4A0A1B0GX49 114 aa4.91□□□□□ -1.62
PDLIM1-204ENST00000492511 PRSS29PA6NIE9 313 aa4.91□□□□□ -1.62
PDLIM1-204ENST00000492511 TEX46H3BTG2 121 aa4.91□□□□□ -1.62
PDLIM1-204ENST00000492511 CIDEAO60543 219 aa4.91□□□□□ -1.62
PDLIM1-204ENST00000492511 NXPH4O95158 308 aa4.91□□□□□ -1.62
PDLIM1-204ENST00000492511 MED14OSP0DP75 135 aa4.91□□□□□ -1.62
PDLIM1-204ENST00000492511 BCL2P10415 239 aa4.91□□□□□ -1.62
PDLIM1-204ENST00000492511 CENPWQ5EE01 88 aa4.91□□□□□ -1.62
PDLIM1-204ENST00000492511 C1orf134Q5TEV5 83 aa4.91□□□□□ -1.62
PDLIM1-204ENST00000492511 ZFP2Q6ZN57 461 aa4.91□□□□□ -1.62
PDLIM1-204ENST00000492511 SSBP4Q9BWG4 385 aaPredicted RBP4.91□□□□□ -1.62
PDLIM1-204ENST00000492511 VAX2Q9UIW0 290 aa4.91□□□□□ -1.62
PDLIM1-204ENST00000492511 C19orf71A6NCJ1 209 aa4.9□□□□□ -1.63
PDLIM1-204ENST00000492511 A8MWV9 139 aa4.9□□□□□ -1.63
PDLIM1-204ENST00000492511 SNAI2O43623 268 aa4.9□□□□□ -1.63
PDLIM1-204ENST00000492511 PDE6DO43924 150 aa4.9□□□□□ -1.63
PDLIM1-204ENST00000492511 IFNA1P01562 189 aa4.9□□□□□ -1.63
PDLIM1-204ENST00000492511 CRYGDP07320 174 aa4.9□□□□□ -1.63
PDLIM1-204ENST00000492511 CXCL1P09341 107 aa4.9□□□□□ -1.63
PDLIM1-204ENST00000492511 SRIP30626 198 aa4.9□□□□□ -1.63
PDLIM1-204ENST00000492511 BLOC1S1P78537 153 aa4.9□□□□□ -1.63
PDLIM1-204ENST00000492511 PRR27Q6MZM9 219 aa4.9□□□□□ -1.63
PDLIM1-204ENST00000492511 C6orf223Q8N319 242 aa4.9□□□□□ -1.63
PDLIM1-204ENST00000492511 C14orf178Q8N769 122 aaPredicted RBP4.9□□□□□ -1.63
PDLIM1-204ENST00000492511 SFRP2Q96HF1 295 aa4.9□□□□□ -1.63
PDLIM1-204ENST00000492511 MED9Q9NWA0 146 aa4.9□□□□□ -1.63
PDLIM1-204ENST00000492511 A0A087WWL8 130 aa4.89□□□□□ -1.63
PDLIM1-204ENST00000492511 A0A1W2PPQ1 181 aa4.89□□□□□ -1.63
PDLIM1-204ENST00000492511 RBFOX3A6NFN3 312 aa4.89□□□□□ -1.63
PDLIM1-204ENST00000492511 M0R381 172 aa4.89□□□□□ -1.63
PDLIM1-204ENST00000492511 SIVA1O15304 175 aa4.89□□□□□ -1.63
PDLIM1-204ENST00000492511 LINC00694P0DN24 101 aa4.89□□□□□ -1.63
PDLIM1-204ENST00000492511 MGST1P10620 155 aaKnown RBP4.89□□□□□ -1.63
PDLIM1-204ENST00000492511 TIRAPP58753 221 aa4.89□□□□□ -1.63
PDLIM1-204ENST00000492511 TNP2Q05952 138 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms