RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 H7C2G1 150 aa7.36□□□□□ -1.23
VPS8-225ENST00000492449 K7ENP7 123 aa7.36□□□□□ -1.23
VPS8-225ENST00000492449 COX6CP09669 75 aa7.36□□□□□ -1.23
VPS8-225ENST00000492449 MSMPQ1L6U9 139 aa7.36□□□□□ -1.23
VPS8-225ENST00000492449 DEFB123Q8N688 67 aa7.36□□□□□ -1.23
VPS8-225ENST00000492449 DCANP1Q8TF63 244 aa7.36□□□□□ -1.23
VPS8-225ENST00000492449 CCL13Q99616 98 aa7.36□□□□□ -1.23
VPS8-225ENST00000492449 HES7Q9BYE0 225 aa7.36□□□□□ -1.23
VPS8-225ENST00000492449 C11orf21Q9P2W6 132 aa7.36□□□□□ -1.23
VPS8-225ENST00000492449 ZNF256Q9Y2P7 627 aaPredicted RBP7.36□□□□□ -1.23
VPS8-225ENST00000492449 IGHV1-18A0A0C4DH31 117 aa7.36□□□□□ -1.23
VPS8-225ENST00000492449 PPP1R17O96001 155 aa7.36□□□□□ -1.23
VPS8-225ENST00000492449 DLX6P56179 175 aa7.36□□□□□ -1.23
VPS8-225ENST00000492449 ZNF876PQ49A33 203 aa7.36□□□□□ -1.23
VPS8-225ENST00000492449 TIMM17AQ99595 171 aa7.36□□□□□ -1.23
VPS8-225ENST00000492449 OXTP01178 125 aa7.35□□□□□ -1.23
VPS8-225ENST00000492449 PEMTQ9UBM1 199 aa7.35□□□□□ -1.23
VPS8-225ENST00000492449 ARFGEF3Q5TH69 2177 aa7.35□□□□□ -1.23
VPS8-225ENST00000492449 WDR87Q6ZQQ6 2873 aa7.35□□□□□ -1.23
VPS8-225ENST00000492449 CNTFRP26992 372 aa7.35□□□□□ -1.23
VPS8-225ENST00000492449 C3orf36Q3SXR2 165 aa7.35□□□□□ -1.23
VPS8-225ENST00000492449 DYNAPQ8N1N2 210 aa7.35□□□□□ -1.23
VPS8-225ENST00000492449 SIT1Q9Y3P8 196 aa7.35□□□□□ -1.23
VPS8-225ENST00000492449 SMAD5-AS1Q9Y6J3 95 aa7.35□□□□□ -1.23
VPS8-225ENST00000492449 PLXNB1O43157 2135 aa7.35□□□□□ -1.23
VPS8-225ENST00000492449 MYO15AQ9UKN7 3530 aa7.35□□□□□ -1.23
VPS8-225ENST00000492449 C4orf26Q17RF5 130 aa7.35□□□□□ -1.23
VPS8-225ENST00000492449 SPANXN1Q5VSR9 72 aa7.35□□□□□ -1.23
VPS8-225ENST00000492449 APELAP0DMC3 54 aa7.34□□□□□ -1.23
VPS8-225ENST00000492449 UPK3BQ9BT76 320 aa7.34□□□□□ -1.23
VPS8-225ENST00000492449 DMDP11532 3685 aa7.34□□□□□ -1.23
VPS8-225ENST00000492449 hADV29S1A0JD25 119 aa7.34□□□□□ -1.23
VPS8-225ENST00000492449 DNAJC13O75165 2243 aa7.34□□□□□ -1.24
VPS8-225ENST00000492449 UBE2E1P51965 193 aa7.33□□□□□ -1.24
VPS8-225ENST00000492449 TMEM200BQ69YZ2 307 aa7.33□□□□□ -1.24
VPS8-225ENST00000492449 DPH3P1Q9H4G8 78 aa7.33□□□□□ -1.24
VPS8-225ENST00000492449 IGLV3-9A0A075B6K5 115 aa7.33□□□□□ -1.24
VPS8-225ENST00000492449 CCL3L1P16619 93 aa7.33□□□□□ -1.24
VPS8-225ENST00000492449 BEX4Q9NWD9 120 aaPredicted RBP7.33□□□□□ -1.24
VPS8-225ENST00000492449 SPRR3Q9UBC9 169 aa7.33□□□□□ -1.24
VPS8-225ENST00000492449 CFAP54Q96N23 3096 aa7.33□□□□□ -1.24
VPS8-225ENST00000492449 CCL4P13236 92 aa7.32□□□□□ -1.24
VPS8-225ENST00000492449 MALP21145 153 aa7.32□□□□□ -1.24
VPS8-225ENST00000492449 DLX1P56177 255 aa7.32□□□□□ -1.24
VPS8-225ENST00000492449 RPL39LQ96EH5 51 aaKnown RBP7.32□□□□□ -1.24
VPS8-225ENST00000492449 LITAFQ99732 161 aa7.32□□□□□ -1.24
VPS8-225ENST00000492449 CYSTM1Q9H1C7 97 aa7.32□□□□□ -1.24
VPS8-225ENST00000492449 ENSAO43768 121 aaKnown RBP7.32□□□□□ -1.24
VPS8-225ENST00000492449 GFRALQ6UXV0 394 aa7.32□□□□□ -1.24
VPS8-225ENST00000492449 MSRB2Q9Y3D2 182 aa7.32□□□□□ -1.24
VPS8-225ENST00000492449 TRBV7-1A0A0A6YYK4 115 aa7.32□□□□□ -1.24
VPS8-225ENST00000492449 NTN3O00634 580 aaPredicted RBP7.32□□□□□ -1.24
VPS8-225ENST00000492449 SPRY3O43610 288 aa7.32□□□□□ -1.24
VPS8-225ENST00000492449 HRCT1Q6UXD1 115 aa7.32□□□□□ -1.24
VPS8-225ENST00000492449 GPHB5Q86YW7 130 aa7.32□□□□□ -1.24
VPS8-225ENST00000492449 PRO0628Q9UI54 55 aa7.32□□□□□ -1.24
VPS8-225ENST00000492449 TP53TG1Q9Y2A0 90 aa7.32□□□□□ -1.24
VPS8-225ENST00000492449 FRYQ5TBA9 3013 aa7.31□□□□□ -1.24
VPS8-225ENST00000492449 CCL8P80075 99 aa7.31□□□□□ -1.24
VPS8-225ENST00000492449 DAND5Q8N907 189 aa7.31□□□□□ -1.24
VPS8-225ENST00000492449 A0A0J9YXY3 114 aa7.31□□□□□ -1.24
VPS8-225ENST00000492449 RPL18AQ02543 176 aaKnown RBP7.31□□□□□ -1.24
VPS8-225ENST00000492449 DEFB108BQ8NET1 73 aa7.31□□□□□ -1.24
VPS8-225ENST00000492449 SAP25Q8TEE9 199 aa7.31□□□□□ -1.24
VPS8-225ENST00000492449 FAM19A4Q96LR4 140 aa7.31□□□□□ -1.24
VPS8-225ENST00000492449 RNF5Q99942 180 aa7.31□□□□□ -1.24
VPS8-225ENST00000492449 TIMM21Q9BVV7 248 aa7.31□□□□□ -1.24
VPS8-225ENST00000492449 JPT2Q9H910 190 aa7.31□□□□□ -1.24
VPS8-225ENST00000492449 PRAC2D3DTV9 90 aa7.3□□□□□ -1.24
VPS8-225ENST00000492449 MED14OSP0DP75 135 aa7.3□□□□□ -1.24
VPS8-225ENST00000492449 CLEC2BQ92478 149 aa7.3□□□□□ -1.24
VPS8-225ENST00000492449 ZFAND3Q9H8U3 227 aa7.3□□□□□ -1.24
VPS8-225ENST00000492449 NBEAQ8NFP9 2946 aa7.3□□□□□ -1.24
VPS8-225ENST00000492449 TRGV5A0A0B4J1U4 118 aa7.3□□□□□ -1.24
VPS8-225ENST00000492449 F8W735 103 aaPredicted RBP7.3□□□□□ -1.24
VPS8-225ENST00000492449 I3L3M4 83 aa7.3□□□□□ -1.24
VPS8-225ENST00000492449 IGHV1-69P01742 117 aa7.3□□□□□ -1.24
VPS8-225ENST00000492449 PMS2CLQ68D20 193 aa7.3□□□□□ -1.24
VPS8-225ENST00000492449 SERP2Q8N6R1 65 aa7.3□□□□□ -1.24
VPS8-225ENST00000492449 MRPL53Q96EL3 112 aaKnown RBP7.3□□□□□ -1.24
VPS8-225ENST00000492449 DYNLRB1Q9NP97 96 aa7.3□□□□□ -1.24
VPS8-225ENST00000492449 PYGO1Q9Y3Y4 419 aa7.3□□□□□ -1.24
VPS8-225ENST00000492449 FRYLO94915 3013 aa7.3□□□□□ -1.24
VPS8-225ENST00000492449 TTC28Q96AY4 2481 aa7.3□□□□□ -1.24
VPS8-225ENST00000492449 IGHV4OR15-8A0A075B7B6 117 aa7.29□□□□□ -1.24
VPS8-225ENST00000492449 A0A087WW49 117 aa7.29□□□□□ -1.24
VPS8-225ENST00000492449 TRAV41A0A0B4J266 112 aa7.29□□□□□ -1.24
VPS8-225ENST00000492449 MBD3L4A6NDZ8 208 aaPredicted RBP7.29□□□□□ -1.24
VPS8-225ENST00000492449 MBD3L3A6NE82 208 aaPredicted RBP7.29□□□□□ -1.24
VPS8-225ENST00000492449 MBD3L5A6NJ08 208 aaPredicted RBP7.29□□□□□ -1.24
VPS8-225ENST00000492449 MDS2Q8NDY4 140 aa7.29□□□□□ -1.24
VPS8-225ENST00000492449 NDUFC2-KCTD14E9PQ53 114 aa7.29□□□□□ -1.24
VPS8-225ENST00000492449 EEF1AKMT3Q96AZ1 226 aa7.29□□□□□ -1.24
VPS8-225ENST00000492449 IGHV3-72A0A0B4J1Y9 119 aa7.29□□□□□ -1.24
VPS8-225ENST00000492449 IGHV1-46P01743 117 aa7.29□□□□□ -1.24
VPS8-225ENST00000492449 IGFL4Q6B9Z1 124 aa7.29□□□□□ -1.24
VPS8-225ENST00000492449 C9orf47Q6ZRZ4 202 aa7.29□□□□□ -1.24
VPS8-225ENST00000492449 SLC25A15Q9Y619 301 aa7.29□□□□□ -1.24
VPS8-225ENST00000492449 TRAV13-1A0A0B4J241 112 aa7.28□□□□□ -1.24
VPS8-225ENST00000492449 EPM2AB3EWF7 344 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms