RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 SLC17A3O00476 420 aa7.53□□□□□ -1.2
CLCNKA-206ENST00000491433 OXTP01178 125 aa7.53□□□□□ -1.2
CLCNKA-206ENST00000491433 UBE2G2P60604 165 aa7.53□□□□□ -1.2
CLCNKA-206ENST00000491433 HAMPP81172 84 aa7.53□□□□□ -1.2
CLCNKA-206ENST00000491433 TREM1Q9NP99 234 aa7.53□□□□□ -1.2
CLCNKA-206ENST00000491433 EPDR1Q9UM22 224 aa7.53□□□□□ -1.2
CLCNKA-206ENST00000491433 TRBV6-1A0A0K0K1D8 114 aa7.52□□□□□ -1.21
CLCNKA-206ENST00000491433 PGPA6NDG6 321 aa7.52□□□□□ -1.21
CLCNKA-206ENST00000491433 SFTA3P0C7M3 94 aa7.52□□□□□ -1.21
CLCNKA-206ENST00000491433 RANP62826 216 aaKnown RBP7.52□□□□□ -1.21
CLCNKA-206ENST00000491433 FAM74A3Q4VXF1 159 aa7.52□□□□□ -1.21
CLCNKA-206ENST00000491433 CST9LP1Q5W188 147 aa7.52□□□□□ -1.21
CLCNKA-206ENST00000491433 CYB561D1Q8N8Q1 229 aa7.52□□□□□ -1.21
CLCNKA-206ENST00000491433 C5orf17Q8NAS9 161 aa7.52□□□□□ -1.21
CLCNKA-206ENST00000491433 HIST1H2BAQ96A08 127 aa7.52□□□□□ -1.21
CLCNKA-206ENST00000491433 MRPL53Q96EL3 112 aaKnown RBP7.52□□□□□ -1.21
CLCNKA-206ENST00000491433 PRELID1Q9Y255 219 aa7.52□□□□□ -1.21
CLCNKA-206ENST00000491433 TRAV12-3A0A0B4J271 114 aa7.51□□□□□ -1.21
CLCNKA-206ENST00000491433 IGLV2-11P01706 119 aa7.51□□□□□ -1.21
CLCNKA-206ENST00000491433 SLC25A5P05141 298 aaKnown RBP7.51□□□□□ -1.21
CLCNKA-206ENST00000491433 SRIP30626 198 aa7.51□□□□□ -1.21
CLCNKA-206ENST00000491433 KIR3DS1Q14943 382 aa7.51□□□□□ -1.21
CLCNKA-206ENST00000491433 ANXA2RQ3ZCQ2 193 aa7.51□□□□□ -1.21
CLCNKA-206ENST00000491433 IQCF2Q8IXL9 164 aa7.51□□□□□ -1.21
CLCNKA-206ENST00000491433 LINC00528Q8N1L1 170 aa7.51□□□□□ -1.21
CLCNKA-206ENST00000491433 EXOC3-AS1Q8N2X6 119 aa7.51□□□□□ -1.21
CLCNKA-206ENST00000491433 BLNKQ8WV28 456 aa7.51□□□□□ -1.21
CLCNKA-206ENST00000491433 GSN-AS1Q9NRJ2 163 aa7.51□□□□□ -1.21
CLCNKA-206ENST00000491433 HHLA3Q9XRX5 114 aa7.51□□□□□ -1.21
CLCNKA-206ENST00000491433 TRBV20OR9-2A0A075B6H5 130 aa7.5□□□□□ -1.21
CLCNKA-206ENST00000491433 SCO2A0A1W2PP80 73 aa7.5□□□□□ -1.21
CLCNKA-206ENST00000491433 H3BTX0 84 aa7.5□□□□□ -1.21
CLCNKA-206ENST00000491433 SPINK4O60575 86 aa7.5□□□□□ -1.21
CLCNKA-206ENST00000491433 TCRAP04437 139 aa7.5□□□□□ -1.21
CLCNKA-206ENST00000491433 CRYGDP07320 174 aa7.5□□□□□ -1.21
CLCNKA-206ENST00000491433 SNRPCP09234 159 aaKnown RBP7.5□□□□□ -1.21
CLCNKA-206ENST00000491433 CRYBA4P53673 196 aa7.5□□□□□ -1.21
CLCNKA-206ENST00000491433 IBA57Q5T440 356 aaKnown RBP7.5□□□□□ -1.21
CLCNKA-206ENST00000491433 VGLL1Q99990 258 aa7.5□□□□□ -1.21
CLCNKA-206ENST00000491433 PARLQ9H300 379 aa7.5□□□□□ -1.21
CLCNKA-206ENST00000491433 SDF2L1Q9HCN8 221 aa7.5□□□□□ -1.21
CLCNKA-206ENST00000491433 SERTM2A0A1B0GWG4 89 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 RBAKDNA6NC62 111 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 C9JCJ5 164 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 DIRC3C9JPN6 131 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 F8W036 122 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 J3KRW8 73 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 PEX7O00628 323 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 IGLV2-8P01709 118 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 ORM1P02763 201 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 S100A9P06702 114 aaKnown RBP7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 TCL1AP56279 114 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 TMEM183BQ1AE95 376 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 COX8CQ7Z4L0 72 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 Q8N814 137 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 C11orf72Q8NBR9 251 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 DERL1Q9BUN8 251 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 MLST8Q9BVC4 326 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 AAMDCQ9H7C9 122 aa7.49□□□□□ -1.21
CLCNKA-206ENST00000491433 C7orf71A4D174 169 aa7.48□□□□□ -1.21
CLCNKA-206ENST00000491433 LRCOL1A6NCL2 159 aa7.48□□□□□ -1.21
CLCNKA-206ENST00000491433 M0R3E3 92 aa7.48□□□□□ -1.21
CLCNKA-206ENST00000491433 TDRG1Q3Y452 100 aa7.48□□□□□ -1.21
CLCNKA-206ENST00000491433 SH2D6Q7Z4S9 175 aa7.48□□□□□ -1.21
CLCNKA-206ENST00000491433 WFDC10BQ8IUB3 73 aa7.48□□□□□ -1.21
CLCNKA-206ENST00000491433 TMEM75Q8N9X5 138 aa7.48□□□□□ -1.21
CLCNKA-206ENST00000491433 SMIM12Q96EX1 92 aa7.48□□□□□ -1.21
CLCNKA-206ENST00000491433 FAM30AQ9NZY2 134 aa7.48□□□□□ -1.21
CLCNKA-206ENST00000491433 TRGV4A0A0C4DH28 118 aa7.47□□□□□ -1.21
CLCNKA-206ENST00000491433 FBLL1A6NHQ2 334 aaKnown RBP7.47□□□□□ -1.21
CLCNKA-206ENST00000491433 ZNF727A8MUV8 499 aa7.47□□□□□ -1.21
CLCNKA-206ENST00000491433 CT45A10P0DMU9 189 aa7.47□□□□□ -1.21
CLCNKA-206ENST00000491433 RPL35P42766 123 aaKnown RBP7.47□□□□□ -1.21
CLCNKA-206ENST00000491433 GNG5P63218 68 aa7.47□□□□□ -1.21
CLCNKA-206ENST00000491433 ZNF415Q09FC8 603 aa7.47□□□□□ -1.21
CLCNKA-206ENST00000491433 TMEM241Q24JQ0 296 aa7.47□□□□□ -1.21
CLCNKA-206ENST00000491433 C9orf47Q6ZRZ4 202 aa7.47□□□□□ -1.21
CLCNKA-206ENST00000491433 LINC00479Q96M42 142 aa7.47□□□□□ -1.21
CLCNKA-206ENST00000491433 C8orf49Q96NF6 230 aa7.47□□□□□ -1.21
CLCNKA-206ENST00000491433 NAT8Q9UHE5 227 aa7.47□□□□□ -1.21
CLCNKA-206ENST00000491433 PKHD1L1Q86WI1 4243 aa7.46□□□□□ -1.21
CLCNKA-206ENST00000491433 LRP1Q07954 4544 aaKnown RBP7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 PRAC2D3DTV9 90 aa7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 K7EQD1 137 aa7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 LTAP01374 205 aa7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 IGHV3-53P01767 116 aa7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 RPL23P62829 140 aaKnown RBP7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 PNRC1Q12796 327 aaPredicted RBP7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 FHL2Q14192 279 aa7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 Q6ZSA8 131 aa7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 OCC1Q8TAD7 63 aa7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 CMTM2Q8TAZ6 248 aa7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 TVP23CQ96ET8 276 aa7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 FMC1Q96HJ9 113 aa7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 FAM19A4Q96LR4 140 aa7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 LINC00477Q96M19 166 aa7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 SMIM7Q9BQ49 75 aa7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 TM2D2Q9BX73 214 aa7.46□□□□□ -1.22
CLCNKA-206ENST00000491433 IGHV3-38A0A0C4DH36 116 aa7.45□□□□□ -1.22
CLCNKA-206ENST00000491433 GCGP01275 180 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms