RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 IGHV3-33P01772 117 aa10.52□□□□□ -0.73
SMPD4-220ENST00000491319 IGHV3-30-3P0DP02 117 aa10.52□□□□□ -0.73
SMPD4-220ENST00000491319 IGHV3-30-5P0DP03 117 aa10.52□□□□□ -0.73
SMPD4-220ENST00000491319 HAMPP81172 84 aa10.52□□□□□ -0.73
SMPD4-220ENST00000491319 ACTR3CQ9C0K3 210 aaPredicted RBP10.52□□□□□ -0.73
SMPD4-220ENST00000491319 IGLV5-52A0A0A0MRZ9 124 aa10.51□□□□□ -0.73
SMPD4-220ENST00000491319 TRAV34A0A0B4J273 112 aa10.51□□□□□ -0.73
SMPD4-220ENST00000491319 PTTG1O95997 202 aa10.51□□□□□ -0.73
SMPD4-220ENST00000491319 MGST1P10620 155 aaKnown RBP10.51□□□□□ -0.73
SMPD4-220ENST00000491319 LELP1Q5T871 98 aa10.51□□□□□ -0.73
SMPD4-220ENST00000491319 FRZBQ92765 325 aa10.51□□□□□ -0.73
SMPD4-220ENST00000491319 PTH2Q96A98 100 aa10.51□□□□□ -0.73
SMPD4-220ENST00000491319 LINC00479Q96M42 142 aa10.51□□□□□ -0.73
SMPD4-220ENST00000491319 TNFSF18Q9UNG2 199 aa10.51□□□□□ -0.73
SMPD4-220ENST00000491319 ARL2-SNX15V9GYD0 113 aa10.51□□□□□ -0.73
SMPD4-220ENST00000491319 IGKV3D-20A0A0C4DH25 116 aa10.5□□□□□ -0.73
SMPD4-220ENST00000491319 A0A1W2PRE2 83 aa10.5□□□□□ -0.73
SMPD4-220ENST00000491319 RNF222A6NCQ9 220 aa10.5□□□□□ -0.73
SMPD4-220ENST00000491319 SMR3BP02814 79 aaPredicted RBP10.5□□□□□ -0.73
SMPD4-220ENST00000491319 INAFM2P0DMQ5 153 aa10.5□□□□□ -0.73
SMPD4-220ENST00000491319 ZNF726P1Q15940 193 aa10.5□□□□□ -0.73
SMPD4-220ENST00000491319 RPL7L1Q6DKI1 246 aaKnown RBP10.5□□□□□ -0.73
SMPD4-220ENST00000491319 Q6ZSN1 163 aa10.5□□□□□ -0.73
SMPD4-220ENST00000491319 Q8N3U1 123 aa10.5□□□□□ -0.73
SMPD4-220ENST00000491319 ATP6V0E2Q8NHE4 81 aa10.5□□□□□ -0.73
SMPD4-220ENST00000491319 GTSF1LQ9H1H1 148 aa10.5□□□□□ -0.73
SMPD4-220ENST00000491319 PARLQ9H300 379 aa10.5□□□□□ -0.73
SMPD4-220ENST00000491319 GIPP09681 153 aaPredicted RBP10.49□□□□□ -0.73
SMPD4-220ENST00000491319 UBE2G2P60604 165 aa10.49□□□□□ -0.73
SMPD4-220ENST00000491319 SAPCD1Q5SSQ6 148 aa10.49□□□□□ -0.73
SMPD4-220ENST00000491319 FLG2Q5D862 2391 aaPredicted RBP10.49□□□□□ -0.73
SMPD4-220ENST00000491319 DMBT1Q9UGM3 2413 aaPredicted RBP10.48□□□□□ -0.73
SMPD4-220ENST00000491319 CTXND1A0A1B0GTU2 59 aa10.48□□□□□ -0.73
SMPD4-220ENST00000491319 LINC00694P0DN24 101 aa10.48□□□□□ -0.73
SMPD4-220ENST00000491319 S100A4P26447 101 aaKnown RBP10.48□□□□□ -0.73
SMPD4-220ENST00000491319 Q86TA4 180 aa10.48□□□□□ -0.73
SMPD4-220ENST00000491319 Q8N814 137 aa10.48□□□□□ -0.73
SMPD4-220ENST00000491319 INO80EQ8NBZ0 244 aaPredicted RBP10.48□□□□□ -0.73
SMPD4-220ENST00000491319 NTN5Q8WTR8 489 aaPredicted RBP10.48□□□□□ -0.73
SMPD4-220ENST00000491319 BOLA1Q9Y3E2 137 aa10.48□□□□□ -0.73
SMPD4-220ENST00000491319 FXYD6-FXYD2A0A087WZ82 144 aa10.47□□□□□ -0.73
SMPD4-220ENST00000491319 GAGE12JA6NER3 117 aa10.47□□□□□ -0.73
SMPD4-220ENST00000491319 A8MWV9 139 aa10.47□□□□□ -0.73
SMPD4-220ENST00000491319 PEX7O00628 323 aa10.47□□□□□ -0.73
SMPD4-220ENST00000491319 IFNA7P01567 189 aa10.47□□□□□ -0.73
SMPD4-220ENST00000491319 ASIPP42127 132 aa10.47□□□□□ -0.73
SMPD4-220ENST00000491319 FGF8P55075 233 aaPredicted RBP10.47□□□□□ -0.73
SMPD4-220ENST00000491319 GAGE1Q13065 139 aa10.47□□□□□ -0.73
SMPD4-220ENST00000491319 GAGE4Q13068 117 aa10.47□□□□□ -0.73
SMPD4-220ENST00000491319 GAGE5Q13069 117 aa10.47□□□□□ -0.73
SMPD4-220ENST00000491319 LGALSLQ3ZCW2 172 aaPredicted RBP10.47□□□□□ -0.73
SMPD4-220ENST00000491319 GAGE13Q4V321 117 aa10.47□□□□□ -0.73
SMPD4-220ENST00000491319 JPT2Q9H910 190 aa10.47□□□□□ -0.73
SMPD4-220ENST00000491319 Q9UF83 564 aa10.47□□□□□ -0.73
SMPD4-220ENST00000491319 BORCS7-ASMTA0A0B4J1R7 106 aa10.46□□□□□ -0.73
SMPD4-220ENST00000491319 H3BVH4 76 aa10.46□□□□□ -0.73
SMPD4-220ENST00000491319 LAGE3Q14657 143 aa10.46□□□□□ -0.73
SMPD4-220ENST00000491319 ZFP2Q6ZN57 461 aa10.46□□□□□ -0.73
SMPD4-220ENST00000491319 OR2T35Q8NGX2 323 aa10.46□□□□□ -0.73
SMPD4-220ENST00000491319 TMEM70Q9BUB7 260 aa10.46□□□□□ -0.73
SMPD4-220ENST00000491319 SAMD10Q9BYL1 202 aa10.46□□□□□ -0.73
SMPD4-220ENST00000491319 FAM74A7A6NL05 159 aa10.45□□□□□ -0.74
SMPD4-220ENST00000491319 FABP5P3A8MUU1 101 aa10.45□□□□□ -0.74
SMPD4-220ENST00000491319 B4DEV8 164 aa10.45□□□□□ -0.74
SMPD4-220ENST00000491319 WFDC2Q14508 124 aa10.45□□□□□ -0.74
SMPD4-220ENST00000491319 PIK3CD-AS1Q5SR53 167 aa10.45□□□□□ -0.74
SMPD4-220ENST00000491319 UFSP1Q6NVU6 142 aa10.45□□□□□ -0.74
SMPD4-220ENST00000491319 C14orf178Q8N769 122 aaPredicted RBP10.45□□□□□ -0.74
SMPD4-220ENST00000491319 ZC2HC1AQ96GY0 325 aa10.45□□□□□ -0.74
SMPD4-220ENST00000491319 BATF3Q9NR55 127 aa10.45□□□□□ -0.74
SMPD4-220ENST00000491319 IL36BQ9NZH7 164 aa10.45□□□□□ -0.74
SMPD4-220ENST00000491319 M0R036 132 aa10.44□□□□□ -0.74
SMPD4-220ENST00000491319 VPS13BQ7Z7G8 4022 aa10.43□□□□□ -0.74
SMPD4-220ENST00000491319 G3V3Q6 166 aa10.43□□□□□ -0.74
SMPD4-220ENST00000491319 CRIP1P50238 77 aa10.43□□□□□ -0.74
SMPD4-220ENST00000491319 AKR1C8PQ5T2L2 129 aa10.43□□□□□ -0.74
SMPD4-220ENST00000491319 DMRTA1Q5VZB9 504 aa10.43□□□□□ -0.74
SMPD4-220ENST00000491319 DAZ4Q86SG3 579 aaKnown RBP10.43□□□□□ -0.74
SMPD4-220ENST00000491319 HIST1H2BAQ96A08 127 aa10.43□□□□□ -0.74
SMPD4-220ENST00000491319 DAZ3Q9NR90 486 aaKnown RBP10.43□□□□□ -0.74
SMPD4-220ENST00000491319 FAM30AQ9NZY2 134 aa10.43□□□□□ -0.74
SMPD4-220ENST00000491319 HERC1Q15751 4861 aa10.43□□□□□ -0.74
SMPD4-220ENST00000491319 GRIFINA4D1Z8 144 aa10.42□□□□□ -0.74
SMPD4-220ENST00000491319 MAP1LC3B2A6NCE7 125 aa10.42□□□□□ -0.74
SMPD4-220ENST00000491319 KRBOX1C9JBD0 128 aa10.42□□□□□ -0.74
SMPD4-220ENST00000491319 SH2D1AO60880 128 aa10.42□□□□□ -0.74
SMPD4-220ENST00000491319 FAM74A4Q5TZK3 123 aa10.42□□□□□ -0.74
SMPD4-220ENST00000491319 TM2D2Q9BX73 214 aa10.42□□□□□ -0.74
SMPD4-220ENST00000491319 MAP1LC3BQ9GZQ8 125 aa10.42□□□□□ -0.74
SMPD4-220ENST00000491319 FAM229AH3BQW9 127 aa10.41□□□□□ -0.74
SMPD4-220ENST00000491319 RHODO00212 210 aa10.41□□□□□ -0.74
SMPD4-220ENST00000491319 LECT2O14960 151 aa10.41□□□□□ -0.74
SMPD4-220ENST00000491319 ARMS2P0C7Q2 107 aa10.41□□□□□ -0.74
SMPD4-220ENST00000491319 DNLZQ5SXM8 178 aa10.41□□□□□ -0.74
SMPD4-220ENST00000491319 SYT8Q8NBV8 401 aa10.41□□□□□ -0.74
SMPD4-220ENST00000491319 OR11H4Q8NGC9 324 aa10.41□□□□□ -0.74
SMPD4-220ENST00000491319 NKX6-2Q9C056 277 aaPredicted RBP10.41□□□□□ -0.74
SMPD4-220ENST00000491319 MYCBP2O75592 4640 aa10.4□□□□□ -0.74
SMPD4-220ENST00000491319 TRAV8-3A0A0A6YYJ7 113 aa10.4□□□□□ -0.74
SMPD4-220ENST00000491319 UBE2G1P62253 170 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 225.8 ms