RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 RHOHQ15669 191 aa2.06□□□□□ -2.08
HMGB1P38-201ENST00000490557 IQCJQ1A5X6 159 aa2.06□□□□□ -2.08
HMGB1P38-201ENST00000490557 SLC48A1Q6P1K1 146 aa2.06□□□□□ -2.08
HMGB1P38-201ENST00000490557 ATG5Q9H1Y0 275 aa2.06□□□□□ -2.08
HMGB1P38-201ENST00000490557 DPH3P1Q9H4G8 78 aa2.06□□□□□ -2.08
HMGB1P38-201ENST00000490557 FREM3P0C091 2139 aa2.06□□□□□ -2.08
HMGB1P38-201ENST00000490557 RTEL1-TNFRSF6BF6WH68 1400 aa2.06□□□□□ -2.08
HMGB1P38-201ENST00000490557 TEX14Q8IWB6 1497 aa2.06□□□□□ -2.08
HMGB1P38-201ENST00000490557 MYO16Q9Y6X6 1858 aa2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 RP1P56715 2156 aa2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 SLC25A6P12236 298 aa2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 IL7P13232 177 aa2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 COX7CP15954 63 aa2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 Q1T7F1 81 aa2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 KRTAP26-1Q6PEX3 210 aa2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 SBSPONQ8IVN8 264 aa2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 PRO1933Q9H354 126 aa2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 ORMDL1Q9P0S3 153 aa2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 DAPK1P53355 1430 aa2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 ADGRL2O95490 1459 aa2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 GLI3P10071 1580 aa2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 BAZ1AQ9NRL2 1556 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 USP54Q70EL1 1684 aa2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 ALPK3Q96L96 1907 aa2.05□□□□□ -2.08
HMGB1P38-201ENST00000490557 RBAKDNA6NC62 111 aa2.04□□□□□ -2.08
HMGB1P38-201ENST00000490557 MT-ATP8P03928 68 aa2.04□□□□□ -2.08
HMGB1P38-201ENST00000490557 CNBPP62633 177 aaKnown RBP2.04□□□□□ -2.08
HMGB1P38-201ENST00000490557 C9orf116Q5BN46 136 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P38-201ENST00000490557 PYY3Q5JQD4 70 aa2.04□□□□□ -2.08
HMGB1P38-201ENST00000490557 FAM74A1Q5RGS3 127 aa2.04□□□□□ -2.08
HMGB1P38-201ENST00000490557 LINC00312Q9Y6C7 94 aa2.04□□□□□ -2.08
HMGB1P38-201ENST00000490557 AKAP12Q02952 1782 aa2.03□□□□□ -2.08
HMGB1P38-201ENST00000490557 TRBV6-8A0A0A6YYG3 113 aa2.03□□□□□ -2.08
HMGB1P38-201ENST00000490557 TMEM30CPA0ZSE6 113 aa2.03□□□□□ -2.08
HMGB1P38-201ENST00000490557 H3BRM9 83 aa2.03□□□□□ -2.08
HMGB1P38-201ENST00000490557 GNGT2O14610 69 aa2.03□□□□□ -2.08
HMGB1P38-201ENST00000490557 CCL16O15467 120 aa2.03□□□□□ -2.08
HMGB1P38-201ENST00000490557 IGHV3-33P01772 117 aa2.03□□□□□ -2.08
HMGB1P38-201ENST00000490557 IGKCP01834 107 aa2.03□□□□□ -2.08
HMGB1P38-201ENST00000490557 TPRXLQ17RH7 258 aa2.03□□□□□ -2.08
HMGB1P38-201ENST00000490557 COMMD6Q7Z4G1 85 aa2.03□□□□□ -2.08
HMGB1P38-201ENST00000490557 SPTSSBQ8NFR3 76 aa2.03□□□□□ -2.08
HMGB1P38-201ENST00000490557 LCN9Q8WX39 176 aa2.03□□□□□ -2.08
HMGB1P38-201ENST00000490557 LINC00052Q96N35 136 aa2.03□□□□□ -2.08
HMGB1P38-201ENST00000490557 KIAA1549Q9HCM3 1950 aa2.03□□□□□ -2.08
HMGB1P38-201ENST00000490557 MYLKQ15746 1914 aa2.03□□□□□ -2.08
HMGB1P38-201ENST00000490557 FYCO1Q9BQS8 1478 aa2.02□□□□□ -2.09
HMGB1P38-201ENST00000490557 FBN1P35555 2871 aaKnown RBP2.02□□□□□ -2.09
HMGB1P38-201ENST00000490557 CPSF1Q10570 1443 aaKnown RBP2.02□□□□□ -2.09
HMGB1P38-201ENST00000490557 C10orf71Q711Q0 1435 aa2.02□□□□□ -2.09
HMGB1P38-201ENST00000490557 H3BRN7 92 aa2.02□□□□□ -2.09
HMGB1P38-201ENST00000490557 IGLC1P0CG04 106 aa2.02□□□□□ -2.09
HMGB1P38-201ENST00000490557 LYPD5Q6UWN5 251 aa2.02□□□□□ -2.09
HMGB1P38-201ENST00000490557 BET1LQ9NYM9 111 aa2.02□□□□□ -2.09
HMGB1P38-201ENST00000490557 KIDINS220Q9ULH0 1771 aa2.02□□□□□ -2.09
HMGB1P38-201ENST00000490557 PXDNLA1KZ92 1463 aa2.01□□□□□ -2.09
HMGB1P38-201ENST00000490557 MED14O60244 1454 aa2.01□□□□□ -2.09
HMGB1P38-201ENST00000490557 AKAP11Q9UKA4 1901 aa2.01□□□□□ -2.09
HMGB1P38-201ENST00000490557 COL24A1Q17RW2 1714 aa2.01□□□□□ -2.09
HMGB1P38-201ENST00000490557 TRGV4A0A0C4DH28 118 aa2.01□□□□□ -2.09
HMGB1P38-201ENST00000490557 TRBV10-3A0A0K0K1G6 114 aa2.01□□□□□ -2.09
HMGB1P38-201ENST00000490557 TFF1P04155 84 aa2.01□□□□□ -2.09
HMGB1P38-201ENST00000490557 KRTDAPP60985 99 aa2.01□□□□□ -2.09
HMGB1P38-201ENST00000490557 Q0VG73 95 aa2.01□□□□□ -2.09
HMGB1P38-201ENST00000490557 MYOZ3Q8TDC0 251 aa2.01□□□□□ -2.09
HMGB1P38-201ENST00000490557 PATE1Q8WXA2 126 aa2.01□□□□□ -2.09
HMGB1P38-201ENST00000490557 MRPL35Q9NZE8 188 aaKnown RBP2.01□□□□□ -2.09
HMGB1P38-201ENST00000490557 ARHGAP5Q13017 1502 aa2.01□□□□□ -2.09
HMGB1P38-201ENST00000490557 IFT140Q96RY7 1462 aa2.01□□□□□ -2.09
HMGB1P38-201ENST00000490557 MCM3APO60318 1980 aa2□□□□□ -2.09
HMGB1P38-201ENST00000490557 TRAV13-2A0A0B4J235 113 aa2□□□□□ -2.09
HMGB1P38-201ENST00000490557 TRBV10-1A0A0K0K1A3 114 aa2□□□□□ -2.09
HMGB1P38-201ENST00000490557 CCKP06307 115 aa2□□□□□ -2.09
HMGB1P38-201ENST00000490557 ASIPP42127 132 aa2□□□□□ -2.09
HMGB1P38-201ENST00000490557 GNG11P61952 73 aa2□□□□□ -2.09
HMGB1P38-201ENST00000490557 CSAG1Q6PB30 78 aa2□□□□□ -2.09
HMGB1P38-201ENST00000490557 LINC00299Q6ZSB3 139 aa2□□□□□ -2.09
HMGB1P38-201ENST00000490557 NDUFA11Q86Y39 141 aa2□□□□□ -2.09
HMGB1P38-201ENST00000490557 SPACA4Q8TDM5 124 aa2□□□□□ -2.09
HMGB1P38-201ENST00000490557 PMCHL2Q9BQD1 86 aa2□□□□□ -2.09
HMGB1P38-201ENST00000490557 RBBP6Q7Z6E9 1792 aaKnown RBP2□□□□□ -2.09
HMGB1P38-201ENST00000490557 MICAL3Q7RTP6 2002 aa2□□□□□ -2.09
HMGB1P38-201ENST00000490557 BCORL1Q5H9F3 1711 aa2□□□□□ -2.09
HMGB1P38-201ENST00000490557 NUMA1Q14980 2115 aa1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 CXorf51AA0A1B0GTR3 108 aa1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 J3QKU1 62 aa1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 SPRNQ5BIV9 151 aa1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 C15orf53Q8NAA6 179 aa1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 DMAC1Q96GE9 116 aa1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 TTTY12Q9BZ98 90 aa1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 MRPL36Q9P0J6 103 aaKnown RBP1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 KLK9Q9UKQ9 250 aa1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 C22orf24Q9Y442 160 aa1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 STRCQ7RTU9 1775 aa1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 SPHKAPQ2M3C7 1700 aa1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 GAPVD1Q14C86 1478 aa1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 MAGI1Q96QZ7 1491 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 ARHGAP35Q9NRY4 1499 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms