RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 Q6ZN92 141 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 GTSCR1Q86UQ5 136 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 THAP8Q8NA92 274 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 NHLRC2Q8NBF2 726 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 STXBP6Q8NFX7 210 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 DYNLRB2Q8TF09 96 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 TMEM190Q8WZ59 177 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 DUX3Q96PT4 197 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 ALKBH7Q9BT30 221 aaPredicted RBP3.55□□□□□ -1.84
CSTF1-205ENST00000490539 PAXXQ9BUH6 204 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 NDUFA4L2Q9NRX3 87 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 ZNF492Q9P255 531 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 A0A087WW49 117 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.54□□□□□ -1.84
CSTF1-205ENST00000490539 IGLC7A0M8Q6 106 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 PRAC2D3DTV9 90 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 M0R2Z0 102 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 GNG7O60262 68 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 HSBP1O75506 76 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 NTF3P20783 257 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 TSPOP30536 169 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 TFPI2P48307 235 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 MFAP2P55001 183 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 SYNJ2BPP57105 145 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 UBE2G1P62253 170 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 SLAQ13239 276 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 Q56UQ5 140 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 GDF5OSQ5U4N7 250 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 PVRIGQ6DKI7 326 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 LCN12Q6JVE5 192 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 CLEC19AQ6UXS0 136 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 FAM19A2Q8N3H0 131 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 STPG4Q8N801 248 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 NUP35Q8NFH5 326 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 OR2D3Q8NGH3 330 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 OR9G4Q8NGQ1 327 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 MRAPQ8TCY5 172 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 CHCHD1Q96BP2 118 aaKnown RBP3.54□□□□□ -1.84
CSTF1-205ENST00000490539 FXYD5Q96DB9 178 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 EPDR1Q9UM22 224 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 UFC1Q9Y3C8 167 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 KLF12Q9Y4X4 402 aa3.54□□□□□ -1.84
CSTF1-205ENST00000490539 F11RQ9Y624 299 aaKnown RBP3.54□□□□□ -1.84
CSTF1-205ENST00000490539 IGLV11-55A0A075B6I3 123 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 IGKV1D-37A0A075B6S9 117 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 TRAV30A0A087WSZ9 112 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 TRAV5A0A0B4J249 113 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 C19orf71A6NCJ1 209 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 FAM231BA6NCW3 169 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 C2orf70A6NJV1 201 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 HIGD1CA8MV81 97 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 A8MWL6 223 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 K7EP13 123 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 VCYO14598 125 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 CRXO43186 299 aaPredicted RBP3.53□□□□□ -1.84
CSTF1-205ENST00000490539 CA1P00915 261 aaPredicted RBP3.53□□□□□ -1.84
CSTF1-205ENST00000490539 IGLV2-11P01706 119 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 OR5AL1P0C617 328 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 PYYP10082 97 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 S100A7P31151 101 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 GPR183P32249 361 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 HBBP68871 147 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 UBE2V1Q13404 147 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 KPRPQ5T749 579 aaPredicted RBP3.53□□□□□ -1.84
CSTF1-205ENST00000490539 LEMD1Q68G75 181 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 EBLN2Q6P2I7 272 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 PATE2Q6UY27 113 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 GPHB5Q86YW7 130 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 ZNF738Q8NE65 137 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 OR10W1Q8NGF6 305 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 OR2K2Q8NGT1 345 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 DLX4Q92988 240 aaPredicted RBP3.53□□□□□ -1.84
CSTF1-205ENST00000490539 FMC1Q96HJ9 113 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 LINC00479Q96M42 142 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 GPR82Q96P67 336 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 TRGV9Q99603 122 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 TMEM70Q9BUB7 260 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 GFRA4Q9GZZ7 299 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 RPP21Q9H633 154 aaKnown RBP3.53□□□□□ -1.84
CSTF1-205ENST00000490539 FNDC4Q9H6D8 234 aaPredicted RBP3.53□□□□□ -1.84
CSTF1-205ENST00000490539 ST20Q9HBF5 79 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 C21orf62Q9NYP8 219 aa3.53□□□□□ -1.84
CSTF1-205ENST00000490539 ZNF256Q9Y2P7 627 aaPredicted RBP3.53□□□□□ -1.84
CSTF1-205ENST00000490539 SORL1Q92673 2214 aa3.52□□□□□ -1.85
CSTF1-205ENST00000490539 CSMD3Q7Z407 3707 aa3.52□□□□□ -1.85
CSTF1-205ENST00000490539 TRBV6-1A0A0K0K1D8 114 aa3.52□□□□□ -1.85
CSTF1-205ENST00000490539 PGPA6NDG6 321 aa3.52□□□□□ -1.85
CSTF1-205ENST00000490539 OR2T8A6NH00 312 aa3.52□□□□□ -1.85
CSTF1-205ENST00000490539 LGALS9O00182 355 aa3.52□□□□□ -1.85
CSTF1-205ENST00000490539 NDUFA4O00483 81 aa3.52□□□□□ -1.85
CSTF1-205ENST00000490539 CCL25O15444 150 aa3.52□□□□□ -1.85
CSTF1-205ENST00000490539 LTAP01374 205 aa3.52□□□□□ -1.85
CSTF1-205ENST00000490539 IGHV3-23P01764 117 aa3.52□□□□□ -1.85
CSTF1-205ENST00000490539 SLC25A5P05141 298 aaKnown RBP3.52□□□□□ -1.85
CSTF1-205ENST00000490539 HINT1P49773 126 aaPredicted RBP3.52□□□□□ -1.85
CSTF1-205ENST00000490539 PLP1P60201 277 aa3.52□□□□□ -1.85
CSTF1-205ENST00000490539 RPS20P60866 119 aaKnown RBP3.52□□□□□ -1.85
CSTF1-205ENST00000490539 WT1-ASQ06250 92 aa3.52□□□□□ -1.85
CSTF1-205ENST00000490539 EGFEM1PQ0D2K5 195 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms