RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 AKR1C3P42330 323 aa13.51□□□□□ -0.25
SMC4-222ENST00000490207 LINC00315P59091 139 aa13.51□□□□□ -0.25
SMC4-222ENST00000490207 TMUB2Q71RG4 321 aa13.51□□□□□ -0.25
SMC4-222ENST00000490207 MBD3L1Q8WWY6 194 aa13.51□□□□□ -0.25
SMC4-222ENST00000490207 PTH2Q96A98 100 aa13.51□□□□□ -0.25
SMC4-222ENST00000490207 ZC2HC1AQ96GY0 325 aa13.51□□□□□ -0.25
SMC4-222ENST00000490207 ZFP30Q9Y2G7 519 aa13.51□□□□□ -0.25
SMC4-222ENST00000490207 CIDEAO60543 219 aa13.5□□□□□ -0.25
SMC4-222ENST00000490207 PAGE4O60829 102 aa13.5□□□□□ -0.25
SMC4-222ENST00000490207 MED14OSP0DP75 135 aa13.5□□□□□ -0.25
SMC4-222ENST00000490207 TPT1P13693 172 aaKnown RBP13.5□□□□□ -0.25
SMC4-222ENST00000490207 IGHV3-73A0A0B4J1V6 119 aa13.49□□□□□ -0.25
SMC4-222ENST00000490207 TRBV6-1A0A0K0K1D8 114 aa13.49□□□□□ -0.25
SMC4-222ENST00000490207 B4DEV8 164 aa13.49□□□□□ -0.25
SMC4-222ENST00000490207 SH2D1AO60880 128 aa13.49□□□□□ -0.25
SMC4-222ENST00000490207 COX8CQ7Z4L0 72 aa13.49□□□□□ -0.25
SMC4-222ENST00000490207 NHLRC2Q8NBF2 726 aa13.49□□□□□ -0.25
SMC4-222ENST00000490207 LTAP01374 205 aa13.48□□□□□ -0.25
SMC4-222ENST00000490207 RHOHQ15669 191 aa13.48□□□□□ -0.25
SMC4-222ENST00000490207 FAM162BQ5T6X4 162 aa13.48□□□□□ -0.25
SMC4-222ENST00000490207 SH2D6Q7Z4S9 175 aa13.48□□□□□ -0.25
SMC4-222ENST00000490207 WFDC10BQ8IUB3 73 aa13.48□□□□□ -0.25
SMC4-222ENST00000490207 SLC25A29Q8N8R3 303 aa13.48□□□□□ -0.25
SMC4-222ENST00000490207 PRADC1Q9BSG0 188 aa13.48□□□□□ -0.25
SMC4-222ENST00000490207 H3BVH4 76 aa13.47□□□□□ -0.25
SMC4-222ENST00000490207 M0R036 132 aa13.47□□□□□ -0.25
SMC4-222ENST00000490207 H2AFB1P0C5Y9 115 aa13.47□□□□□ -0.25
SMC4-222ENST00000490207 CRIP1P50238 77 aa13.47□□□□□ -0.25
SMC4-222ENST00000490207 IL36BQ9NZH7 164 aa13.47□□□□□ -0.25
SMC4-222ENST00000490207 LY96Q9Y6Y9 160 aa13.47□□□□□ -0.25
SMC4-222ENST00000490207 TRBV6-4A0A1B0GX49 114 aa13.46□□□□□ -0.25
SMC4-222ENST00000490207 KRBOX1C9JBD0 128 aa13.46□□□□□ -0.25
SMC4-222ENST00000490207 SCO2A0A1W2PP80 73 aa13.45□□□□□ -0.26
SMC4-222ENST00000490207 A8MWV9 139 aa13.45□□□□□ -0.26
SMC4-222ENST00000490207 C16orf90A8MZG2 172 aa13.45□□□□□ -0.26
SMC4-222ENST00000490207 MGST1P10620 155 aaKnown RBP13.45□□□□□ -0.26
SMC4-222ENST00000490207 ZNF674Q2M3X9 581 aa13.45□□□□□ -0.26
SMC4-222ENST00000490207 LGALSLQ3ZCW2 172 aaPredicted RBP13.45□□□□□ -0.26
SMC4-222ENST00000490207 PIK3CD-AS1Q5SR53 167 aa13.45□□□□□ -0.26
SMC4-222ENST00000490207 DNLZQ5SXM8 178 aa13.45□□□□□ -0.26
SMC4-222ENST00000490207 Q6ZRN7 208 aaPredicted RBP13.45□□□□□ -0.26
SMC4-222ENST00000490207 PARLQ9H300 379 aa13.45□□□□□ -0.26
SMC4-222ENST00000490207 TRAV9-2A0A087WT02 112 aa13.44□□□□□ -0.26
SMC4-222ENST00000490207 TIRAPP58753 221 aa13.44□□□□□ -0.26
SMC4-222ENST00000490207 LINC01559Q495D7 138 aa13.44□□□□□ -0.26
SMC4-222ENST00000490207 TCTE3Q8IZS6 198 aa13.44□□□□□ -0.26
SMC4-222ENST00000490207 LRP1BQ9NZR2 4599 aa13.44□□□□□ -0.26
SMC4-222ENST00000490207 GRIFINA4D1Z8 144 aa13.43□□□□□ -0.26
SMC4-222ENST00000490207 S100A9P06702 114 aaKnown RBP13.43□□□□□ -0.26
SMC4-222ENST00000490207 ARMS2P0C7Q2 107 aa13.43□□□□□ -0.26
SMC4-222ENST00000490207 EVI2AP22794 236 aa13.43□□□□□ -0.26
SMC4-222ENST00000490207 ZFP2Q6ZN57 461 aa13.43□□□□□ -0.26
SMC4-222ENST00000490207 SPATA12Q7Z6I5 190 aa13.43□□□□□ -0.26
SMC4-222ENST00000490207 SYT8Q8NBV8 401 aa13.43□□□□□ -0.26
SMC4-222ENST00000490207 TMSB15BA0A087X1C1 80 aa13.42□□□□□ -0.26
SMC4-222ENST00000490207 DNAH10OSP0CZ25 163 aa13.42□□□□□ -0.26
SMC4-222ENST00000490207 K7EP13 123 aa13.41□□□□□ -0.26
SMC4-222ENST00000490207 NFE4Q86UQ8 179 aa13.41□□□□□ -0.26
SMC4-222ENST00000490207 JPT2Q9H910 190 aa13.41□□□□□ -0.26
SMC4-222ENST00000490207 MANBALQ9NQG1 85 aa13.41□□□□□ -0.26
SMC4-222ENST00000490207 PHLDA3Q9Y5J5 127 aa13.41□□□□□ -0.26
SMC4-222ENST00000490207 DNAH5Q8TE73 4624 aa13.41□□□□□ -0.26
SMC4-222ENST00000490207 RAB5CP51148 216 aa13.4□□□□□ -0.26
SMC4-222ENST00000490207 DMRTA1Q5VZB9 504 aa13.4□□□□□ -0.26
SMC4-222ENST00000490207 EIF5AL1Q6IS14 154 aaKnown RBP13.4□□□□□ -0.26
SMC4-222ENST00000490207 TNFRSF18Q9Y5U5 241 aa13.4□□□□□ -0.26
SMC4-222ENST00000490207 CRYGDP07320 174 aa13.39□□□□□ -0.27
SMC4-222ENST00000490207 Q6ZSN1 163 aa13.39□□□□□ -0.27
SMC4-222ENST00000490207 C10orf126Q8N4M7 172 aa13.39□□□□□ -0.27
SMC4-222ENST00000490207 SAMD10Q9BYL1 202 aa13.39□□□□□ -0.27
SMC4-222ENST00000490207 SCRT2Q9NQ03 307 aa13.39□□□□□ -0.27
SMC4-222ENST00000490207 MSRB1Q9NZV6 116 aa13.39□□□□□ -0.27
SMC4-222ENST00000490207 GNG13Q9P2W3 67 aa13.39□□□□□ -0.27
SMC4-222ENST00000490207 RYR1P21817 5038 aa13.39□□□□□ -0.27
SMC4-222ENST00000490207 TRAV8-6A0A0B4J262 113 aa13.38□□□□□ -0.27
SMC4-222ENST00000490207 IGHV3-38A0A0C4DH36 116 aa13.38□□□□□ -0.27
SMC4-222ENST00000490207 RHODO00212 210 aa13.38□□□□□ -0.27
SMC4-222ENST00000490207 C1QBP02746 253 aa13.38□□□□□ -0.27
SMC4-222ENST00000490207 OR10J3Q5JRS4 329 aa13.38□□□□□ -0.27
SMC4-222ENST00000490207 UFSP1Q6NVU6 142 aa13.38□□□□□ -0.27
SMC4-222ENST00000490207 Q6ZNX1 250 aa13.38□□□□□ -0.27
SMC4-222ENST00000490207 BAGE2Q86Y30 109 aa13.38□□□□□ -0.27
SMC4-222ENST00000490207 ATP6V0E2Q8NHE4 81 aa13.38□□□□□ -0.27
SMC4-222ENST00000490207 TRAV1-1A0A0B4J248 108 aa13.37□□□□□ -0.27
SMC4-222ENST00000490207 TEX46H3BTG2 121 aa13.37□□□□□ -0.27
SMC4-222ENST00000490207 M0R381 172 aa13.37□□□□□ -0.27
SMC4-222ENST00000490207 LINC00694P0DN24 101 aa13.37□□□□□ -0.27
SMC4-222ENST00000490207 SULT1A2P50226 295 aa13.37□□□□□ -0.27
SMC4-222ENST00000490207 KRTAP10-2P60368 255 aa13.37□□□□□ -0.27
SMC4-222ENST00000490207 ERVFC1-1P60608 527 aa13.37□□□□□ -0.27
SMC4-222ENST00000490207 CCL20P78556 96 aa13.37□□□□□ -0.27
SMC4-222ENST00000490207 LELP1Q5T871 98 aa13.37□□□□□ -0.27
SMC4-222ENST00000490207 FAM74A4Q5TZK3 123 aa13.37□□□□□ -0.27
SMC4-222ENST00000490207 ZFP82Q8N141 532 aa13.37□□□□□ -0.27
SMC4-222ENST00000490207 MLST8Q9BVC4 326 aa13.37□□□□□ -0.27
SMC4-222ENST00000490207 GTSF1LQ9H1H1 148 aa13.37□□□□□ -0.27
SMC4-222ENST00000490207 HSPG2P98160 4391 aa13.36□□□□□ -0.27
SMC4-222ENST00000490207 GAGE12JA6NER3 117 aa13.36□□□□□ -0.27
SMC4-222ENST00000490207 RPL19P84098 196 aaKnown RBP13.36□□□□□ -0.27
SMC4-222ENST00000490207 GAGE1Q13065 139 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms