RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 VGLL1Q99990 258 aa8.72□□□□□ -1.01
TRIM40-208ENST00000489892 AGPAT4-IT1Q9H0P7 198 aa8.72□□□□□ -1.01
TRIM40-208ENST00000489892 HSPB8Q9UJY1 196 aa8.72□□□□□ -1.01
TRIM40-208ENST00000489892 VWFP04275 2813 aa8.72□□□□□ -1.01
TRIM40-208ENST00000489892 TRAV9-2A0A087WT02 112 aa8.71□□□□□ -1.02
TRIM40-208ENST00000489892 A0A0J9YX75 114 aa8.71□□□□□ -1.02
TRIM40-208ENST00000489892 OR11H12B2RN74 326 aa8.71□□□□□ -1.02
TRIM40-208ENST00000489892 PRAC2D3DTV9 90 aa8.71□□□□□ -1.02
TRIM40-208ENST00000489892 LINC00614P0C842 121 aa8.71□□□□□ -1.02
TRIM40-208ENST00000489892 PET117Q6UWS5 81 aa8.71□□□□□ -1.02
TRIM40-208ENST00000489892 SGK494Q96LW2 274 aa8.71□□□□□ -1.02
TRIM40-208ENST00000489892 CLUHP3Q96NS8 147 aa8.71□□□□□ -1.02
TRIM40-208ENST00000489892 SSBP4Q9BWG4 385 aaPredicted RBP8.71□□□□□ -1.02
TRIM40-208ENST00000489892 TMEM191AQ9H0A3 160 aa8.71□□□□□ -1.02
TRIM40-208ENST00000489892 TMEM189A5PLL7 270 aa8.7□□□□□ -1.02
TRIM40-208ENST00000489892 FABP5P3A8MUU1 101 aa8.7□□□□□ -1.02
TRIM40-208ENST00000489892 LEPROTL1O95214 131 aa8.7□□□□□ -1.02
TRIM40-208ENST00000489892 IGLC3P0DOY3 106 aa8.7□□□□□ -1.02
TRIM40-208ENST00000489892 HLA-DRB4P13762 266 aa8.7□□□□□ -1.02
TRIM40-208ENST00000489892 DEFB131AP59861 70 aa8.7□□□□□ -1.02
TRIM40-208ENST00000489892 GTSCR1Q86UQ5 136 aa8.7□□□□□ -1.02
TRIM40-208ENST00000489892 MAP6D1Q9H9H5 199 aa8.7□□□□□ -1.02
TRIM40-208ENST00000489892 ST20Q9HBF5 79 aa8.7□□□□□ -1.02
TRIM40-208ENST00000489892 ZNF256Q9Y2P7 627 aaPredicted RBP8.7□□□□□ -1.02
TRIM40-208ENST00000489892 MRPS16Q9Y3D3 137 aaKnown RBP8.7□□□□□ -1.02
TRIM40-208ENST00000489892 HLA-DRB4X5D2U9 266 aa8.7□□□□□ -1.02
TRIM40-208ENST00000489892 HNRNPA3P51991 378 aaKnown RBP8.69□□□□□ -1.02
TRIM40-208ENST00000489892 ERCC8Q13216 396 aa8.69□□□□□ -1.02
TRIM40-208ENST00000489892 COL5A1-AS1Q5SY13 56 aa8.69□□□□□ -1.02
TRIM40-208ENST00000489892 FAM19A2Q8N3H0 131 aa8.69□□□□□ -1.02
TRIM40-208ENST00000489892 Q8TAT8 98 aa8.69□□□□□ -1.02
TRIM40-208ENST00000489892 MAP1LC3CQ9BXW4 147 aa8.69□□□□□ -1.02
TRIM40-208ENST00000489892 LAMTOR2Q9Y2Q5 125 aa8.69□□□□□ -1.02
TRIM40-208ENST00000489892 TRAV21A0A0B4J279 112 aa8.68□□□□□ -1.02
TRIM40-208ENST00000489892 IGHV1-24A0A0C4DH33 117 aa8.68□□□□□ -1.02
TRIM40-208ENST00000489892 HSBP1L1C9JCN9 74 aa8.68□□□□□ -1.02
TRIM40-208ENST00000489892 TCAPO15273 167 aa8.68□□□□□ -1.02
TRIM40-208ENST00000489892 BEAN1Q3B7T3 259 aa8.68□□□□□ -1.02
TRIM40-208ENST00000489892 LINC01559Q495D7 138 aa8.68□□□□□ -1.02
TRIM40-208ENST00000489892 FA2HQ7L5A8 372 aa8.68□□□□□ -1.02
TRIM40-208ENST00000489892 URB1-AS1Q96HZ7 61 aa8.68□□□□□ -1.02
TRIM40-208ENST00000489892 SELENOKQ9Y6D0 94 aa8.68□□□□□ -1.02
TRIM40-208ENST00000489892 A8MTW9 85 aa8.67□□□□□ -1.02
TRIM40-208ENST00000489892 SYS1-DBNDD2H3BUS1 97 aa8.67□□□□□ -1.02
TRIM40-208ENST00000489892 SH2D1AO60880 128 aa8.67□□□□□ -1.02
TRIM40-208ENST00000489892 PPBPP02775 128 aa8.67□□□□□ -1.02
TRIM40-208ENST00000489892 ARMS2P0C7Q2 107 aa8.67□□□□□ -1.02
TRIM40-208ENST00000489892 PRKDCP78527 4128 aaKnown RBP8.67□□□□□ -1.02
TRIM40-208ENST00000489892 GAGE1Q13065 139 aa8.67□□□□□ -1.02
TRIM40-208ENST00000489892 SPATA12Q7Z6I5 190 aa8.67□□□□□ -1.02
TRIM40-208ENST00000489892 APRG1Q8IVJ8 170 aa8.67□□□□□ -1.02
TRIM40-208ENST00000489892 STHQ8IWL8 128 aa8.67□□□□□ -1.02
TRIM40-208ENST00000489892 OR10AG1Q8NH19 301 aa8.67□□□□□ -1.02
TRIM40-208ENST00000489892 FAM19A4Q96LR4 140 aa8.67□□□□□ -1.02
TRIM40-208ENST00000489892 PMCHL2Q9BQD1 86 aa8.67□□□□□ -1.02
TRIM40-208ENST00000489892 AP5S1Q9NUS5 200 aa8.67□□□□□ -1.02
TRIM40-208ENST00000489892 U3KQK5 164 aa8.67□□□□□ -1.02
TRIM40-208ENST00000489892 KLLNB2CW77 178 aa8.66□□□□□ -1.02
TRIM40-208ENST00000489892 F6UB75 175 aa8.66□□□□□ -1.02
TRIM40-208ENST00000489892 H3BMM0 161 aa8.66□□□□□ -1.02
TRIM40-208ENST00000489892 CDKN1BP46527 198 aa8.66□□□□□ -1.02
TRIM40-208ENST00000489892 ODF3L2Q3SX64 289 aa8.66□□□□□ -1.02
TRIM40-208ENST00000489892 Q6ZN92 141 aa8.66□□□□□ -1.02
TRIM40-208ENST00000489892 ORMDL3Q8N138 153 aa8.66□□□□□ -1.02
TRIM40-208ENST00000489892 C8orf49Q96NF6 230 aa8.66□□□□□ -1.02
TRIM40-208ENST00000489892 CNFNQ9BYD5 112 aa8.66□□□□□ -1.02
TRIM40-208ENST00000489892 SORL1Q92673 2214 aa8.65□□□□□ -1.02
TRIM40-208ENST00000489892 IGLC6P0CF74 106 aa8.65□□□□□ -1.02
TRIM40-208ENST00000489892 TDRG1Q3Y452 100 aa8.65□□□□□ -1.02
TRIM40-208ENST00000489892 FAM104BQ5XKR9 115 aa8.65□□□□□ -1.02
TRIM40-208ENST00000489892 ZFAND2AQ8N6M9 145 aa8.65□□□□□ -1.02
TRIM40-208ENST00000489892 FER1L6-AS1Q8NA97 138 aa8.65□□□□□ -1.02
TRIM40-208ENST00000489892 CMYA5Q8N3K9 4069 aa8.64□□□□□ -1.03
TRIM40-208ENST00000489892 C7orf71A4D174 169 aa8.64□□□□□ -1.03
TRIM40-208ENST00000489892 ORM1P02763 201 aa8.64□□□□□ -1.03
TRIM40-208ENST00000489892 CRIP1P50238 77 aa8.64□□□□□ -1.03
TRIM40-208ENST00000489892 LYZL1Q6UWQ5 148 aa8.64□□□□□ -1.03
TRIM40-208ENST00000489892 PRSS3P2Q8NHM4 247 aa8.64□□□□□ -1.03
TRIM40-208ENST00000489892 C1QTNF4Q9BXJ3 329 aa8.64□□□□□ -1.03
TRIM40-208ENST00000489892 BIRC6Q9NR09 4857 aa8.64□□□□□ -1.03
TRIM40-208ENST00000489892 NOTCH3Q9UM47 2321 aa8.64□□□□□ -1.03
TRIM40-208ENST00000489892 KNCNA6PVL3 124 aa8.63□□□□□ -1.03
TRIM40-208ENST00000489892 RNASE4P34096 147 aaKnown RBP8.63□□□□□ -1.03
TRIM40-208ENST00000489892 LINC01545Q5VT33 79 aa8.63□□□□□ -1.03
TRIM40-208ENST00000489892 MORN3Q6PF18 240 aaPredicted RBP8.63□□□□□ -1.03
TRIM40-208ENST00000489892 PRELID3AQ96N28 172 aa8.63□□□□□ -1.03
TRIM40-208ENST00000489892 INSP01308 110 aa8.62□□□□□ -1.03
TRIM40-208ENST00000489892 AMTNQ6UX39 209 aa8.62□□□□□ -1.03
TRIM40-208ENST00000489892 TRPT1Q86TN4 253 aaKnown RBP8.62□□□□□ -1.03
TRIM40-208ENST00000489892 LINC01546A6NGU7 62 aa8.61□□□□□ -1.03
TRIM40-208ENST00000489892 IGKV3-20P01619 116 aa8.61□□□□□ -1.03
TRIM40-208ENST00000489892 HBDP02042 147 aa8.61□□□□□ -1.03
TRIM40-208ENST00000489892 PRB4P10163 310 aaPredicted RBP8.61□□□□□ -1.03
TRIM40-208ENST00000489892 IGLL1P15814 213 aa8.61□□□□□ -1.03
TRIM40-208ENST00000489892 ZNF80P51504 273 aaPredicted RBP8.61□□□□□ -1.03
TRIM40-208ENST00000489892 DEFB1P60022 68 aa8.61□□□□□ -1.03
TRIM40-208ENST00000489892 CACNG7P62955 275 aa8.61□□□□□ -1.03
TRIM40-208ENST00000489892 LGALS9BQ3B8N2 356 aa8.61□□□□□ -1.03
TRIM40-208ENST00000489892 LGALS9CQ6DKI2 356 aa8.61□□□□□ -1.03
TRIM40-208ENST00000489892 FAM159AQ6UWV7 190 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms