RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 TRGC1P0CF51 173 aa7.31□□□□□ -1.24
USP11-211ENST00000489111 RNASE3P12724 160 aaKnown RBP7.31□□□□□ -1.24
USP11-211ENST00000489111 C1orf158Q8N1D5 194 aa7.31□□□□□ -1.24
USP11-211ENST00000489111 C9orf85Q96MD7 179 aa7.31□□□□□ -1.24
USP11-211ENST00000489111 AP1S3Q96PC3 154 aa7.31□□□□□ -1.24
USP11-211ENST00000489111 SCRT2Q9NQ03 307 aa7.31□□□□□ -1.24
USP11-211ENST00000489111 IGHV4-4A0A075B6R2 117 aa7.3□□□□□ -1.24
USP11-211ENST00000489111 KIR2DL5BA0A0G2JN68 375 aa7.3□□□□□ -1.24
USP11-211ENST00000489111 KIR2DL5BA0A0G2JPC4 375 aa7.3□□□□□ -1.24
USP11-211ENST00000489111 G3V4G9 280 aa7.3□□□□□ -1.24
USP11-211ENST00000489111 NXPH4O95158 308 aa7.3□□□□□ -1.24
USP11-211ENST00000489111 S100A6P06703 90 aa7.3□□□□□ -1.24
USP11-211ENST00000489111 GIG44P09565 113 aaPredicted RBP7.3□□□□□ -1.24
USP11-211ENST00000489111 KRTAP10-11P60412 298 aa7.3□□□□□ -1.24
USP11-211ENST00000489111 SLAQ13239 276 aa7.3□□□□□ -1.24
USP11-211ENST00000489111 ZNF493Q6ZR52 646 aa7.3□□□□□ -1.24
USP11-211ENST00000489111 KIR2DL5AQ8N109 375 aa7.3□□□□□ -1.24
USP11-211ENST00000489111 GATD1Q8NB37 220 aa7.3□□□□□ -1.24
USP11-211ENST00000489111 KIR2DL5BQ8NHK3 375 aa7.3□□□□□ -1.24
USP11-211ENST00000489111 MDFICQ9P1T7 246 aa7.3□□□□□ -1.24
USP11-211ENST00000489111 PHOX2AO14813 284 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 SPRY2O43597 315 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 HIST1H2BKO60814 126 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 HIST1H2BJP06899 126 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 IGHV4-30-4P0DP06 118 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 HIST1H2BOP23527 126 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 HIST1H2BBP33778 126 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 HIST1H2BDP58876 126 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 HIST1H2BCP62807 126 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 HIST2H2BEQ16778 126 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 KIAA1644Q3SXP7 199 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.29□□□□□ -1.24
USP11-211ENST00000489111 HIST1H2BHQ93079 126 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 RCHY1Q96PM5 261 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 HIST1H2BNQ99877 126 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 HIST1H2BMQ99879 126 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 TMEM191AQ9H0A3 160 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 MSRB1Q9NZV6 116 aa7.29□□□□□ -1.24
USP11-211ENST00000489111 SMIM17P0DL12 118 aa7.28□□□□□ -1.24
USP11-211ENST00000489111 SRIP30626 198 aa7.28□□□□□ -1.24
USP11-211ENST00000489111 RRN3P1Q2M238 152 aa7.28□□□□□ -1.24
USP11-211ENST00000489111 SAMD5Q5TGI4 173 aa7.28□□□□□ -1.24
USP11-211ENST00000489111 FAM104BQ5XKR9 115 aa7.28□□□□□ -1.24
USP11-211ENST00000489111 AMN1Q8IY45 258 aa7.28□□□□□ -1.24
USP11-211ENST00000489111 TMEM263Q8WUH6 116 aaKnown RBP7.28□□□□□ -1.24
USP11-211ENST00000489111 C16orf74Q96GX8 76 aa7.28□□□□□ -1.24
USP11-211ENST00000489111 SPXQ9BT56 116 aa7.28□□□□□ -1.24
USP11-211ENST00000489111 GSN-AS1Q9NRJ2 163 aa7.28□□□□□ -1.24
USP11-211ENST00000489111 M0R2P5 195 aa7.27□□□□□ -1.25
USP11-211ENST00000489111 UBE2CO00762 179 aa7.27□□□□□ -1.25
USP11-211ENST00000489111 MGPP08493 103 aa7.27□□□□□ -1.25
USP11-211ENST00000489111 EVI2AP22794 236 aa7.27□□□□□ -1.25
USP11-211ENST00000489111 ZNF876PQ49A33 203 aa7.27□□□□□ -1.25
USP11-211ENST00000489111 DMRTA1Q5VZB9 504 aa7.27□□□□□ -1.25
USP11-211ENST00000489111 ZNF705AQ6ZN79 300 aaPredicted RBP7.27□□□□□ -1.25
USP11-211ENST00000489111 CSNK1G2-AS1Q8NCQ2 148 aa7.27□□□□□ -1.25
USP11-211ENST00000489111 PRM2P04554 102 aa7.26□□□□□ -1.25
USP11-211ENST00000489111 AZU1P20160 251 aa7.26□□□□□ -1.25
USP11-211ENST00000489111 NDUFA6P56556 154 aa7.26□□□□□ -1.25
USP11-211ENST00000489111 ORMDL3Q8N138 153 aa7.26□□□□□ -1.25
USP11-211ENST00000489111 C14orf178Q8N769 122 aaPredicted RBP7.26□□□□□ -1.25
USP11-211ENST00000489111 C11orf72Q8NBR9 251 aa7.26□□□□□ -1.25
USP11-211ENST00000489111 RNASE8Q8TDE3 154 aaKnown RBP7.26□□□□□ -1.25
USP11-211ENST00000489111 DPH3P1Q9H4G8 78 aa7.26□□□□□ -1.25
USP11-211ENST00000489111 NOTCH3Q9UM47 2321 aa7.26□□□□□ -1.25
USP11-211ENST00000489111 D6R8Y8 96 aa7.25□□□□□ -1.25
USP11-211ENST00000489111 PPBPP02775 128 aa7.25□□□□□ -1.25
USP11-211ENST00000489111 CKS2P33552 79 aa7.25□□□□□ -1.25
USP11-211ENST00000489111 DEFB135Q30KP9 77 aa7.25□□□□□ -1.25
USP11-211ENST00000489111 MRPL51Q4U2R6 128 aaKnown RBP7.25□□□□□ -1.25
USP11-211ENST00000489111 BAGE3Q86Y29 109 aa7.25□□□□□ -1.25
USP11-211ENST00000489111 PTH2Q96A98 100 aa7.25□□□□□ -1.25
USP11-211ENST00000489111 ALKBH7Q9BT30 221 aaPredicted RBP7.25□□□□□ -1.25
USP11-211ENST00000489111 MRPL16Q9NX20 251 aaKnown RBP7.25□□□□□ -1.25
USP11-211ENST00000489111 A0A087WWL8 130 aa7.24□□□□□ -1.25
USP11-211ENST00000489111 TRGV1A0A0A0MS02 117 aa7.24□□□□□ -1.25
USP11-211ENST00000489111 SMIM9A6NGZ8 99 aa7.24□□□□□ -1.25
USP11-211ENST00000489111 A8MZ25 164 aa7.24□□□□□ -1.25
USP11-211ENST00000489111 NCR2O95944 276 aa7.24□□□□□ -1.25
USP11-211ENST00000489111 RAB4AP20338 218 aa7.24□□□□□ -1.25
USP11-211ENST00000489111 OR10J3Q5JRS4 329 aa7.24□□□□□ -1.25
USP11-211ENST00000489111 PIK3CD-AS1Q5SR53 167 aa7.24□□□□□ -1.25
USP11-211ENST00000489111 FAM74A4Q5TZK3 123 aa7.24□□□□□ -1.25
USP11-211ENST00000489111 IL17DQ8TAD2 202 aa7.24□□□□□ -1.25
USP11-211ENST00000489111 MRAP2Q96G30 205 aa7.24□□□□□ -1.25
USP11-211ENST00000489111 RNF185Q96GF1 192 aa7.24□□□□□ -1.25
USP11-211ENST00000489111 PRELID3AQ96N28 172 aa7.24□□□□□ -1.25
USP11-211ENST00000489111 NDUFAF3Q9BU61 184 aa7.24□□□□□ -1.25
USP11-211ENST00000489111 U3KQK5 164 aa7.24□□□□□ -1.25
USP11-211ENST00000489111 A8MWV9 139 aa7.23□□□□□ -1.25
USP11-211ENST00000489111 F5H697 171 aa7.23□□□□□ -1.25
USP11-211ENST00000489111 SMKR1H3BMG3 65 aa7.23□□□□□ -1.25
USP11-211ENST00000489111 SNRPEP62304 92 aaKnown RBP7.23□□□□□ -1.25
USP11-211ENST00000489111 Q0VG73 95 aa7.23□□□□□ -1.25
USP11-211ENST00000489111 ZNF56Q15929 161 aa7.23□□□□□ -1.25
USP11-211ENST00000489111 Q6ZWC4 215 aa7.23□□□□□ -1.25
USP11-211ENST00000489111 JPT2Q9H910 190 aa7.23□□□□□ -1.25
USP11-211ENST00000489111 LAMTOR2Q9Y2Q5 125 aa7.23□□□□□ -1.25
USP11-211ENST00000489111 ANK2Q01484 3957 aa7.23□□□□□ -1.25
USP11-211ENST00000489111 SORL1Q92673 2214 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms