RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 DNLZQ5SXM8 178 aa8.84□□□□□ -0.99
HLA-DOB-209ENST00000488325 LYZL1Q6UWQ5 148 aa8.84□□□□□ -0.99
HLA-DOB-209ENST00000488325 C19orf73Q9NVV2 129 aa8.84□□□□□ -0.99
HLA-DOB-209ENST00000488325 TRAV12-2A0A075B6T6 113 aa8.83□□□□□ -1
HLA-DOB-209ENST00000488325 IGHV1OR15-1A0A075B7D0 117 aa8.83□□□□□ -1
HLA-DOB-209ENST00000488325 ZNF324O75467 553 aaPredicted RBP8.83□□□□□ -1
HLA-DOB-209ENST00000488325 INSP01308 110 aa8.83□□□□□ -1
HLA-DOB-209ENST00000488325 OR5AL1P0C617 328 aa8.83□□□□□ -1
HLA-DOB-209ENST00000488325 ARMS2P0C7Q2 107 aa8.83□□□□□ -1
HLA-DOB-209ENST00000488325 FXYD7P58549 80 aa8.83□□□□□ -1
HLA-DOB-209ENST00000488325 CACNG7P62955 275 aa8.83□□□□□ -1
HLA-DOB-209ENST00000488325 FABP9Q0Z7S8 132 aa8.83□□□□□ -1
HLA-DOB-209ENST00000488325 MUC21Q5SSG8 566 aa8.83□□□□□ -1
HLA-DOB-209ENST00000488325 MORN3Q6PF18 240 aaPredicted RBP8.83□□□□□ -1
HLA-DOB-209ENST00000488325 TMEM136Q6ZRR5 245 aa8.83□□□□□ -1
HLA-DOB-209ENST00000488325 MRPL18Q9H0U6 180 aaKnown RBP8.83□□□□□ -1
HLA-DOB-209ENST00000488325 TRGV11A0A075B6L2 103 aa8.82□□□□□ -1
HLA-DOB-209ENST00000488325 SNAI2O43623 268 aa8.82□□□□□ -1
HLA-DOB-209ENST00000488325 CAMPP49913 170 aa8.82□□□□□ -1
HLA-DOB-209ENST00000488325 TDRG1Q3Y452 100 aa8.82□□□□□ -1
HLA-DOB-209ENST00000488325 GATD1Q8NB37 220 aa8.82□□□□□ -1
HLA-DOB-209ENST00000488325 C1QTNF4Q9BXJ3 329 aa8.82□□□□□ -1
HLA-DOB-209ENST00000488325 CNFNQ9BYD5 112 aa8.82□□□□□ -1
HLA-DOB-209ENST00000488325 H3BVH4 76 aa8.81□□□□□ -1
HLA-DOB-209ENST00000488325 CRXO43186 299 aaPredicted RBP8.81□□□□□ -1
HLA-DOB-209ENST00000488325 APCSP02743 223 aa8.81□□□□□ -1
HLA-DOB-209ENST00000488325 Q6ZQT7 251 aa8.81□□□□□ -1
HLA-DOB-209ENST00000488325 SMIM15Q7Z3B0 74 aa8.81□□□□□ -1
HLA-DOB-209ENST00000488325 SBSPONQ8IVN8 264 aa8.81□□□□□ -1
HLA-DOB-209ENST00000488325 ZFP82Q8N141 532 aa8.81□□□□□ -1
HLA-DOB-209ENST00000488325 SSBP4Q9BWG4 385 aaPredicted RBP8.81□□□□□ -1
HLA-DOB-209ENST00000488325 ALMS1Q8TCU4 4167 aa8.8□□□□□ -1
HLA-DOB-209ENST00000488325 S100A6P06703 90 aa8.8□□□□□ -1
HLA-DOB-209ENST00000488325 FRMD6-AS1P0C7T7 363 aa8.8□□□□□ -1
HLA-DOB-209ENST00000488325 TRGC1P0CF51 173 aa8.8□□□□□ -1
HLA-DOB-209ENST00000488325 TWIST1Q15672 202 aa8.8□□□□□ -1
HLA-DOB-209ENST00000488325 SPANXN1Q5VSR9 72 aa8.8□□□□□ -1
HLA-DOB-209ENST00000488325 ZNF575Q86XF7 245 aa8.8□□□□□ -1
HLA-DOB-209ENST00000488325 TMEM256Q8N2U0 113 aa8.8□□□□□ -1
HLA-DOB-209ENST00000488325 LINC00467Q9BRT7 94 aa8.8□□□□□ -1
HLA-DOB-209ENST00000488325 PHLDA3Q9Y5J5 127 aa8.8□□□□□ -1
HLA-DOB-209ENST00000488325 SORL1Q92673 2214 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 IGHV4-4A0A075B6R2 117 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 PHOX2AO14813 284 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 GNRH2O43555 120 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 HIST1H2BKO60814 126 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 HIST1H2BJP06899 126 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 HIST1H2BOP23527 126 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 HIST1H2BBP33778 126 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 HIST1H2BDP58876 126 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 HIST1H2BCP62807 126 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 HIST2H2BEQ16778 126 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.79□□□□□ -1
HLA-DOB-209ENST00000488325 ZNF493Q6ZR52 646 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 DEFB125Q8N687 156 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 HIST1H2BHQ93079 126 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 LINC01587Q99440 93 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 HIST1H2BNQ99877 126 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 HIST1H2BMQ99879 126 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 WFDC10AQ9H1F0 79 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 GOLT1BQ9Y3E0 138 aa8.79□□□□□ -1
HLA-DOB-209ENST00000488325 TIMM8BQ9Y5J9 83 aaPredicted RBP8.79□□□□□ -1
HLA-DOB-209ENST00000488325 AGRNO00468 2067 aa8.78□□□□□ -1
HLA-DOB-209ENST00000488325 IGHV3-16A0A0C4DH30 117 aa8.78□□□□□ -1
HLA-DOB-209ENST00000488325 CBY3A6NI87 242 aa8.78□□□□□ -1
HLA-DOB-209ENST00000488325 RNASE3P12724 160 aaKnown RBP8.78□□□□□ -1
HLA-DOB-209ENST00000488325 RPL35AP18077 110 aaKnown RBP8.78□□□□□ -1
HLA-DOB-209ENST00000488325 NTF3P20783 257 aa8.78□□□□□ -1
HLA-DOB-209ENST00000488325 TMEM208Q9BTX3 173 aa8.78□□□□□ -1
HLA-DOB-209ENST00000488325 EDA2RQ9HAV5 297 aa8.78□□□□□ -1
HLA-DOB-209ENST00000488325 SCRT2Q9NQ03 307 aa8.78□□□□□ -1
HLA-DOB-209ENST00000488325 XCL2Q9UBD3 114 aa8.78□□□□□ -1
HLA-DOB-209ENST00000488325 MUC21A0A0G2JKD1 596 aa8.77□□□□□ -1.01
HLA-DOB-209ENST00000488325 MUC21A0A140T8X8 626 aa8.77□□□□□ -1.01
HLA-DOB-209ENST00000488325 ZNF415Q09FC8 603 aa8.77□□□□□ -1.01
HLA-DOB-209ENST00000488325 SLAQ13239 276 aa8.77□□□□□ -1.01
HLA-DOB-209ENST00000488325 Q8N1Y9 231 aa8.77□□□□□ -1.01
HLA-DOB-209ENST00000488325 SYT8Q8NBV8 401 aa8.77□□□□□ -1.01
HLA-DOB-209ENST00000488325 OR10AG1Q8NH19 301 aa8.77□□□□□ -1.01
HLA-DOB-209ENST00000488325 C9orf85Q96MD7 179 aa8.77□□□□□ -1.01
HLA-DOB-209ENST00000488325 TMEM191AQ9H0A3 160 aa8.77□□□□□ -1.01
HLA-DOB-209ENST00000488325 ZMAT4Q9H898 229 aa8.77□□□□□ -1.01
HLA-DOB-209ENST00000488325 ABCA13Q86UQ4 5058 aa8.77□□□□□ -1.01
HLA-DOB-209ENST00000488325 RBMY1A1P0DJD3 496 aaKnown RBP8.76□□□□□ -1.01
HLA-DOB-209ENST00000488325 RBMY1CP0DJD4 496 aa8.76□□□□□ -1.01
HLA-DOB-209ENST00000488325 NDUFA6P56556 154 aa8.76□□□□□ -1.01
HLA-DOB-209ENST00000488325 SSTP61278 116 aa8.76□□□□□ -1.01
HLA-DOB-209ENST00000488325 RBMY1FQ15415 496 aaKnown RBP8.76□□□□□ -1.01
HLA-DOB-209ENST00000488325 FAM104BQ5XKR9 115 aa8.76□□□□□ -1.01
HLA-DOB-209ENST00000488325 CSTL1Q9H114 145 aa8.76□□□□□ -1.01
HLA-DOB-209ENST00000488325 LOC102724200A0A096LPH7 203 aaPredicted RBP8.75□□□□□ -1.01
HLA-DOB-209ENST00000488325 M0R381 172 aa8.75□□□□□ -1.01
HLA-DOB-209ENST00000488325 NXPH4O95158 308 aa8.75□□□□□ -1.01
HLA-DOB-209ENST00000488325 KIAA1644Q3SXP7 199 aa8.75□□□□□ -1.01
HLA-DOB-209ENST00000488325 AP1S3Q96PC3 154 aa8.75□□□□□ -1.01
HLA-DOB-209ENST00000488325 KIR2DL5BA0A0G2JN68 375 aa8.74□□□□□ -1.01
HLA-DOB-209ENST00000488325 KIR2DL5BA0A0G2JPC4 375 aa8.74□□□□□ -1.01
HLA-DOB-209ENST00000488325 HTN1P15515 57 aa8.74□□□□□ -1.01
HLA-DOB-209ENST00000488325 SRIP30626 198 aa8.74□□□□□ -1.01
HLA-DOB-209ENST00000488325 APOC4P55056 127 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms