RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 MUC4Q99102 2169 aa8.45□□□□□ -1.06
SDC3-204ENST00000487984 HSPG2P98160 4391 aa8.45□□□□□ -1.06
SDC3-204ENST00000487984 ZNF674Q2M3X9 581 aa8.45□□□□□ -1.06
SDC3-204ENST00000487984 Q6AWC8 147 aa8.45□□□□□ -1.06
SDC3-204ENST00000487984 FMC1Q96HJ9 113 aa8.45□□□□□ -1.06
SDC3-204ENST00000487984 PARLQ9H300 379 aa8.45□□□□□ -1.06
SDC3-204ENST00000487984 MDFICQ9P1T7 246 aa8.45□□□□□ -1.06
SDC3-204ENST00000487984 RPH3ALQ9UNE2 315 aa8.45□□□□□ -1.06
SDC3-204ENST00000487984 LENEPQ9Y5L5 61 aa8.45□□□□□ -1.06
SDC3-204ENST00000487984 ICOSQ9Y6W8 199 aa8.45□□□□□ -1.06
SDC3-204ENST00000487984 CRYBA4P53673 196 aa8.44□□□□□ -1.06
SDC3-204ENST00000487984 PNRC1Q12796 327 aaPredicted RBP8.44□□□□□ -1.06
SDC3-204ENST00000487984 FHL2Q14192 279 aa8.44□□□□□ -1.06
SDC3-204ENST00000487984 TMEM183BQ1AE95 376 aa8.44□□□□□ -1.06
SDC3-204ENST00000487984 TMEM241Q24JQ0 296 aa8.44□□□□□ -1.06
SDC3-204ENST00000487984 GOLT1AQ6ZVE7 132 aa8.44□□□□□ -1.06
SDC3-204ENST00000487984 SPATA12Q7Z6I5 190 aa8.44□□□□□ -1.06
SDC3-204ENST00000487984 TMEM183AQ8IXX5 376 aa8.44□□□□□ -1.06
SDC3-204ENST00000487984 SVBPQ8N300 66 aa8.44□□□□□ -1.06
SDC3-204ENST00000487984 C8orf49Q96NF6 230 aa8.44□□□□□ -1.06
SDC3-204ENST00000487984 NAT8Q9UHE5 227 aa8.44□□□□□ -1.06
SDC3-204ENST00000487984 PRO0255Q9UI72 69 aa8.44□□□□□ -1.06
SDC3-204ENST00000487984 CARHSP1Q9Y2V2 147 aaKnown RBP8.44□□□□□ -1.06
SDC3-204ENST00000487984 TRBV6-1A0A0K0K1D8 114 aa8.43□□□□□ -1.06
SDC3-204ENST00000487984 C9JCJ5 164 aa8.43□□□□□ -1.06
SDC3-204ENST00000487984 NXPH4O95158 308 aa8.43□□□□□ -1.06
SDC3-204ENST00000487984 BTF3P20290 206 aaKnown RBP8.43□□□□□ -1.06
SDC3-204ENST00000487984 RPL35P42766 123 aaKnown RBP8.43□□□□□ -1.06
SDC3-204ENST00000487984 GNG4P50150 75 aa8.43□□□□□ -1.06
SDC3-204ENST00000487984 GNG5P63218 68 aa8.43□□□□□ -1.06
SDC3-204ENST00000487984 SLAQ13239 276 aa8.43□□□□□ -1.06
SDC3-204ENST00000487984 C10orf91Q5T1B1 145 aa8.43□□□□□ -1.06
SDC3-204ENST00000487984 TMEM75Q8N9X5 138 aa8.43□□□□□ -1.06
SDC3-204ENST00000487984 SMIM12Q96EX1 92 aa8.43□□□□□ -1.06
SDC3-204ENST00000487984 NDFIP1Q9BT67 221 aa8.43□□□□□ -1.06
SDC3-204ENST00000487984 KRTAP4-5Q9BYR2 181 aa8.43□□□□□ -1.06
SDC3-204ENST00000487984 BIN3Q9NQY0 253 aa8.43□□□□□ -1.06
SDC3-204ENST00000487984 HHLA3Q9XRX5 114 aa8.43□□□□□ -1.06
SDC3-204ENST00000487984 LY96Q9Y6Y9 160 aa8.43□□□□□ -1.06
SDC3-204ENST00000487984 DNAH5Q8TE73 4624 aa8.43□□□□□ -1.06
SDC3-204ENST00000487984 TRGV11A0A075B6L2 103 aa8.42□□□□□ -1.06
SDC3-204ENST00000487984 SIVA1O15304 175 aa8.42□□□□□ -1.06
SDC3-204ENST00000487984 CDK2AP2O75956 126 aa8.42□□□□□ -1.06
SDC3-204ENST00000487984 SNAPINO95295 136 aa8.42□□□□□ -1.06
SDC3-204ENST00000487984 APOC3P02656 99 aa8.42□□□□□ -1.06
SDC3-204ENST00000487984 LINC00315P59091 139 aa8.42□□□□□ -1.06
SDC3-204ENST00000487984 SAPCD1Q5SSQ6 148 aa8.42□□□□□ -1.06
SDC3-204ENST00000487984 FAM159AQ6UWV7 190 aa8.42□□□□□ -1.06
SDC3-204ENST00000487984 RASL10AQ92737 203 aa8.42□□□□□ -1.06
SDC3-204ENST00000487984 TVP23CQ96ET8 276 aa8.42□□□□□ -1.06
SDC3-204ENST00000487984 ZNF479Q96JC4 524 aa8.42□□□□□ -1.06
SDC3-204ENST00000487984 NAGKQ9UJ70 344 aa8.42□□□□□ -1.06
SDC3-204ENST00000487984 ZFP30Q9Y2G7 519 aa8.42□□□□□ -1.06
SDC3-204ENST00000487984 TRAV8-1A0A0A6YYK1 113 aa8.41□□□□□ -1.06
SDC3-204ENST00000487984 TRGV4A0A0C4DH28 118 aa8.41□□□□□ -1.06
SDC3-204ENST00000487984 KRTAP10-2P60368 255 aa8.41□□□□□ -1.06
SDC3-204ENST00000487984 FLI1Q01543 452 aaPredicted RBP8.41□□□□□ -1.06
SDC3-204ENST00000487984 MRPL23Q16540 153 aaKnown RBP8.41□□□□□ -1.06
SDC3-204ENST00000487984 TDRG1Q3Y452 100 aa8.41□□□□□ -1.06
SDC3-204ENST00000487984 LYPD5Q6UWN5 251 aa8.41□□□□□ -1.06
SDC3-204ENST00000487984 BAGE2Q86Y30 109 aa8.41□□□□□ -1.06
SDC3-204ENST00000487984 SPXQ9BT56 116 aa8.41□□□□□ -1.06
SDC3-204ENST00000487984 PSG8Q9UQ74 426 aa8.41□□□□□ -1.06
SDC3-204ENST00000487984 B4DEV8 164 aa8.4□□□□□ -1.06
SDC3-204ENST00000487984 M0R036 132 aa8.4□□□□□ -1.06
SDC3-204ENST00000487984 GNRH2O43555 120 aa8.4□□□□□ -1.06
SDC3-204ENST00000487984 ADCYAP1P18509 176 aa8.4□□□□□ -1.06
SDC3-204ENST00000487984 CENPWQ5EE01 88 aa8.4□□□□□ -1.06
SDC3-204ENST00000487984 Q6ZRN7 208 aaPredicted RBP8.4□□□□□ -1.06
SDC3-204ENST00000487984 NEGR1Q7Z3B1 354 aa8.4□□□□□ -1.06
SDC3-204ENST00000487984 DERL1Q9BUN8 251 aa8.4□□□□□ -1.06
SDC3-204ENST00000487984 SDF2L1Q9HCN8 221 aa8.4□□□□□ -1.06
SDC3-204ENST00000487984 TRAV34A0A0B4J273 112 aa8.39□□□□□ -1.07
SDC3-204ENST00000487984 TRAV21A0A0B4J279 112 aa8.39□□□□□ -1.07
SDC3-204ENST00000487984 IGHV3-16A0A0C4DH30 117 aa8.39□□□□□ -1.07
SDC3-204ENST00000487984 K7EQD1 137 aa8.39□□□□□ -1.07
SDC3-204ENST00000487984 LTAP01374 205 aa8.39□□□□□ -1.07
SDC3-204ENST00000487984 ADIRFQ15847 76 aa8.39□□□□□ -1.07
SDC3-204ENST00000487984 PRNTQ86SH4 94 aa8.39□□□□□ -1.07
SDC3-204ENST00000487984 Q86TA4 180 aa8.39□□□□□ -1.07
SDC3-204ENST00000487984 LINC00479Q96M42 142 aa8.39□□□□□ -1.07
SDC3-204ENST00000487984 APOBP04114 4563 aaKnown RBP8.38□□□□□ -1.07
SDC3-204ENST00000487984 TRAV4A0A0B4J268 109 aa8.38□□□□□ -1.07
SDC3-204ENST00000487984 M0R2P5 195 aa8.38□□□□□ -1.07
SDC3-204ENST00000487984 TYMSP04818 313 aa8.38□□□□□ -1.07
SDC3-204ENST00000487984 MGST1P10620 155 aaKnown RBP8.38□□□□□ -1.07
SDC3-204ENST00000487984 GYPEP15421 78 aa8.38□□□□□ -1.07
SDC3-204ENST00000487984 SRIP30626 198 aa8.38□□□□□ -1.07
SDC3-204ENST00000487984 RHEBQ15382 184 aa8.38□□□□□ -1.07
SDC3-204ENST00000487984 CLRN3Q8NCR9 226 aa8.38□□□□□ -1.07
SDC3-204ENST00000487984 SGK494Q96LW2 274 aa8.38□□□□□ -1.07
SDC3-204ENST00000487984 PPP1R2P9O14990 202 aa8.37□□□□□ -1.07
SDC3-204ENST00000487984 IGLV2-11P01706 119 aa8.37□□□□□ -1.07
SDC3-204ENST00000487984 ORM1P02763 201 aa8.37□□□□□ -1.07
SDC3-204ENST00000487984 MT-ND4LP03901 98 aa8.37□□□□□ -1.07
SDC3-204ENST00000487984 RPL23P62829 140 aaKnown RBP8.37□□□□□ -1.07
SDC3-204ENST00000487984 LINC01551Q86U37 167 aa8.37□□□□□ -1.07
SDC3-204ENST00000487984 MAPKAPK5-AS1Q8N8E1 139 aa8.37□□□□□ -1.07
SDC3-204ENST00000487984 C15orf54Q8N8G6 183 aa8.37□□□□□ -1.07
SDC3-204ENST00000487984 OR4C5Q8NGB2 326 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms