RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 MUC21A0A0G2JKD1 596 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 MUC21A0A140T8X8 626 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 C3orf85A0A1B0GTC6 90 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 A0A1W2PPM0 123 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 ODAMA1E959 279 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 OR4C46A6NHA9 309 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 C2orf70A6NJV1 201 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 TMEM262E9PQX1 116 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 H0Y980 276 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 IGLV3-1P01715 115 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 PRB1P04280 392 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 COX8AP10176 69 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 HIST1H1EP10412 219 aaKnown RBP1.8□□□□□ -2.12
USP48-209ENST00000487880 FABP2P12104 132 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 CPMP14384 443 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 S100A7P31151 101 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 AESQ08117 197 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 PLCXD2Q0VAA5 305 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 SMAGPQ0VAQ4 97 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 KLRD1Q13241 179 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 RTL8BQ17RB0 113 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 FAM229BQ4G0N7 80 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 C22orf39Q6P5X5 142 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 Q6Q795 121 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 LCN15Q6UWW0 184 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 ATP5L2Q7Z4Y8 100 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 BPIFA4PQ86YQ2 179 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 OR5AS1Q8N127 324 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 RPP25LQ8N5L8 163 aaKnown RBP1.8□□□□□ -2.12
USP48-209ENST00000487880 OR10X1Q8NGY0 326 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 OR10AG1Q8NH19 301 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 TSKUQ8WUA8 353 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 ARHGAP5-AS1Q96IT6 56 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 DNAJC30Q96LL9 226 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 TMEM147Q9BVK8 224 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 ULBP3Q9BZM4 244 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 TMEM126AQ9H061 195 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 WDR54Q9H977 334 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 NPVFQ9HCQ7 196 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 Q9Y3F1 56 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 SOX21Q9Y651 276 aaPredicted RBP1.8□□□□□ -2.12
USP48-209ENST00000487880 SPCS1Q9Y6A9 102 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 PAPPA2Q9BXP8 1791 aa1.8□□□□□ -2.12
USP48-209ENST00000487880 PLXND1Q9Y4D7 1925 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 IGKV1D-42A0A075B6H8 117 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 TRAV36DV7A0A075B6V5 113 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 A0A1B0GV50 99 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 A0A1W2PQD3 144 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 SMIM27A0A1W2PRY6 76 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 GRIFINA4D1Z8 144 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 SYS1-DBNDD2H3BUS1 97 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 M0R2Z0 102 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 RER1O15258 196 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 SYNGR1O43759 233 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 SSSCA1O60232 199 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 CST7O76096 145 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 OR7C1O76099 320 aaPredicted RBP1.79□□□□□ -2.12
USP48-209ENST00000487880 PPYP01298 95 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 TTRP02766 147 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 HLA-DRB4P13762 266 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 CBLN1P23435 193 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 RPL18Q07020 188 aaKnown RBP1.79□□□□□ -2.12
USP48-209ENST00000487880 KRTAP21-3Q3LHN1 58 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 LINC01545Q5VT33 79 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 TMEM14EPQ6UXP3 125 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 S100A7AQ86SG5 101 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 OR8B12Q8NGG6 310 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 OR10D3Q8NH80 312 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 H1FXQ92522 213 aaKnown RBP1.79□□□□□ -2.12
USP48-209ENST00000487880 ADAT3Q96EY9 351 aaPredicted RBP1.79□□□□□ -2.12
USP48-209ENST00000487880 COX14Q96I36 57 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 AMELYQ99218 206 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 PBOV1Q9GZY1 135 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 GTSF1LQ9H1H1 148 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 HIGD1BQ9P298 99 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 HSPB8Q9UJY1 196 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 V9GYV3 84 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 HLA-DRB4X5D2U9 266 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 COL4A6Q14031 1691 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 SCN3AQ9NY46 2000 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 MPDZO75970 2070 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 FBN3Q75N90 2809 aa1.79□□□□□ -2.12
USP48-209ENST00000487880 IGHV1-24A0A0C4DH33 117 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 FNDC10F2Z333 226 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 F5H5K5 113 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 H3BMG7 143 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 H3BUT2 72 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 K7EQS6 105 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 LEPROTL1O95214 131 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 IGHV3-7P01780 117 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 CRYGDP07320 174 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 IGHV3-30-3P0DP02 117 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 EVI2AP22794 236 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 NPPCP23582 126 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 SRIP30626 198 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 ASIPP42127 132 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 BSPH1Q075Z2 132 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 SLC38A11Q08AI6 406 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 KISS1Q15726 138 aa1.78□□□□□ -2.12
USP48-209ENST00000487880 LGALS9BQ3B8N2 356 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms