RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 AADACL3Q5VUY0 350 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 CNIH2Q6PI25 160 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 FAM19A5Q7Z5A7 132 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-217ENST00000487825 MTURNQ8N3F0 131 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 C11orf72Q8NBR9 251 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 BORCS5Q969J3 196 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 SEC22AQ96IW7 307 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 KIR2DL4Q99706 377 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 ZNF2Q9BSG1 426 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-217ENST00000487825 MRPL32Q9BYC8 188 aaKnown RBP2.71□□□□□ -1.98
BRCA1-217ENST00000487825 RBKSQ9H477 322 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 TRAV8-6A0A0B4J262 113 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 TRAV26-2A0A0B4J265 109 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 TINCRA0A1B0GVN0 87 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 DISC1C4P0D8 188 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 H7C1H1 209 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 SLC17A2O00624 439 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 ZNF861PO60384 105 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 PPBPP02775 128 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 LINC00614P0C842 121 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 HIST1H1DP16402 221 aaKnown RBP2.7□□□□□ -1.98
BRCA1-217ENST00000487825 F2RP25116 425 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 TALDO1P37837 337 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 SNCAP37840 140 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 RND2P52198 227 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 FGF8P55075 233 aaPredicted RBP2.7□□□□□ -1.98
BRCA1-217ENST00000487825 HSPE1P61604 102 aaKnown RBP2.7□□□□□ -1.98
BRCA1-217ENST00000487825 RHOBP62745 196 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 HIST1H1AQ02539 215 aaPredicted RBP2.7□□□□□ -1.98
BRCA1-217ENST00000487825 RPL18AQ02543 176 aaKnown RBP2.7□□□□□ -1.98
BRCA1-217ENST00000487825 PRSS54Q6PEW0 395 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 ZNF818PQ6ZRF7 136 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 S100A7AQ86SG5 101 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 CLVS1Q8IUQ0 354 aaPredicted RBP2.7□□□□□ -1.98
BRCA1-217ENST00000487825 C14orf178Q8N769 122 aaPredicted RBP2.7□□□□□ -1.98
BRCA1-217ENST00000487825 C9orf163Q8N9P6 203 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 OR51G1Q8NGK1 321 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 C7orf33Q8WU49 177 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 FAM104AQ969W3 186 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 RNF185Q96GF1 192 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 SLC25A31Q9H0C2 315 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 ACOT13Q9NPJ3 140 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 EHFQ9NZC4 300 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 PSORS1C2Q9UIG4 136 aa2.7□□□□□ -1.98
BRCA1-217ENST00000487825 USH2AO75445 5202 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 TRAV8-1A0A0A6YYK1 113 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 TRAV8-2A0A0B4J237 113 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 PNMA8CA0A1B0GUJ8 204 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 SMKR1H3BMG3 65 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 TAAR5O14804 337 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 PPYP01298 95 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 TYMSP04818 313 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 OR5AL1P0C617 328 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 SCGB1A1P11684 91 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 SLC25A4P12235 298 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 RAB5AP20339 215 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 GADD45AP24522 165 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 LPAR6P43657 344 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 SUB1P53999 127 aaKnown RBP eCLIP2.69□□□□□ -1.98
BRCA1-217ENST00000487825 TCL1AP56279 114 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 TRAM1Q15629 374 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 HSD17B12Q53GQ0 312 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 SPINK9Q5DT21 86 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 SDIM1Q6ZPB5 146 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 NIT1Q86X76 327 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 OR8I2Q8N0Y5 310 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 ZNF664Q8N3J9 261 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 RNF182Q8N6D2 247 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 OR8A1Q8NGG7 326 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 OR10R2Q8NGX6 335 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 RMI2Q96E14 147 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 ZC2HC1AQ96GY0 325 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 ANXA10Q9UJ72 324 aa2.69□□□□□ -1.98
BRCA1-217ENST00000487825 FCGBPQ9Y6R7 5405 aaPredicted RBP2.69□□□□□ -1.98
BRCA1-217ENST00000487825 IGLV8-61A0A075B6I0 122 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 TRGV4A0A0C4DH28 118 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 TCRBV3S1A0A5B6 114 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 A6NDN8 102 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 PITX3O75364 302 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 GALR1P47211 349 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 SULT1A1P50225 295 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 SULT1A2P50226 295 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 RBX1P62877 108 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 INSL4Q14641 139 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 C1orf146Q5VVC0 180 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 DPPA3Q6W0C5 159 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 SLC35G3Q8N808 338 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 SPACA4Q8TDM5 124 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 FAM3DQ96BQ1 224 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 SFRP2Q96HF1 295 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 SLC35E1Q96K37 410 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 SCGB3A2Q96PL1 93 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 PBDC1Q9BVG4 233 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 PLAC8Q9NZF1 115 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 RAB22AQ9UL26 194 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 KLF12Q9Y4X4 402 aa2.68□□□□□ -1.98
BRCA1-217ENST00000487825 IGKV2D-24A0A075B6R9 120 aa2.67□□□□□ -1.98
BRCA1-217ENST00000487825 IGKV1OR2-108A0A075B7D4 117 aa2.67□□□□□ -1.98
BRCA1-217ENST00000487825 LOC100131303A0A0U1RQF7 123 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms