RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 C5orf17Q8NAS9 161 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 MNS1Q8NEH6 495 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 DEFB124Q8NES8 71 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 PXT1Q8NFP0 134 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 OR52R1Q8NGF1 315 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 OR51A4Q8NGJ6 313 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 OR5D16Q8NGK9 328 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 OR9Q1Q8NGQ5 310 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 OR13D1Q8NGV5 346 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 OR10K1Q8NGX5 313 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 STAG3L4Q8TBR4 150 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 C18orf32Q8TCD1 76 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TSKUQ8WUA8 353 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CT55Q8WUE5 264 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 THEM6Q8WUY1 208 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 PPP1R1CQ8WVI7 109 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 C1orf54Q8WWF1 131 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TSLPQ969D9 159 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 POP5Q969H6 163 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 LSM10Q969L4 123 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 ARL11Q969Q4 196 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 MUCL1Q96DR8 90 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 DPH3Q96FX2 82 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 ZC2HC1AQ96GY0 325 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 HYLS1Q96M11 299 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CFAP53Q96M91 514 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 ZNF714Q96N38 554 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 OR4C12Q96R67 309 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 GPER1Q99527 375 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SIGMAR1Q99720 223 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 GINS3Q9BRX5 216 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 LXNQ9BS40 222 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 FAM103A1Q9BTL3 118 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SNRNP25Q9BV90 132 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 GGACTQ9BVM4 153 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 LINC00470Q9BZP3 86 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 DRC3Q9H069 523 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 LPAR5Q9H1C0 372 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 RNASE7Q9H1E1 156 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 DCSTAMPQ9H295 470 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SH3BGRL3Q9H299 93 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 C11orf68Q9H3H3 251 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 KCNQ1DNQ9H478 68 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 NAA60Q9H7X0 242 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TPT1P8Q9HAU6 139 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 POPDC3Q9HBV1 291 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 PRTFDC1Q9NRG1 225 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CDC42SE2Q9NRR3 84 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 NDUFA4L2Q9NRX3 87 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SPANXA1Q9NS26 97 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 RPRMQ9NS64 109 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CBLN4Q9NTU7 201 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SCN3BQ9NY72 215 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SPANXCQ9NY87 97 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 NKIRAS1Q9NYS0 192 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 IDI2-AS1Q9NZ38 188 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CRIPTQ9P021 101 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 MRPL36Q9P0J6 103 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TMEM14CQ9P0S9 112 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 HIGD1BQ9P298 99 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 COPZ2Q9P299 210 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 METTL1Q9UBP6 276 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 RABAC1Q9UI14 185 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 ATPIF1Q9UII2 106 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 HSPB8Q9UJY1 196 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 JPT1Q9UK76 154 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 OR52A1Q9UKL2 312 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 PCTPQ9UKL6 214 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 APLNQ9ULZ1 77 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TNFSF18Q9UNG2 199 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 ERGIC3Q9Y282 383 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SLC35A3Q9Y2D2 325 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 UBE2D4Q9Y2X8 147 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 DNAJC15Q9Y5T4 150 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 MPC1Q9Y5U8 109 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 ARL2-SNX15V9GYD0 113 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 V9GYH0 126 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 V9GYV3 84 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 HLA-DRB4X5D2U9 266 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 FAT1Q14517 4588 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CDC42BPAQ5VT25 1732 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 NRXN2Q9P2S2 1712 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 MARF1Q9Y4F3 1742 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SACSQ9NZJ4 4579 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 PIK3C2AO00443 1686 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 ZC3H13Q5T200 1668 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 USH2AO75445 5202 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TARBP1Q13395 1621 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 PREX2Q70Z35 1606 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 MROH1Q8NDA8 1641 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 NRXN3Q9Y4C0 1643 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 MYCBP2O75592 4640 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PCLOQ9Y6V0 5065 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 FAT3Q8TDW7 4589 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ECM29Q5VYK3 1845 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 DNAH17Q9UFH2 4485 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 RGPD3A6NKT7 1758 aaPredicted RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 COL14A1Q05707 1796 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 RGPD4Q7Z3J3 1758 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms