RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 PRADC1Q9BSG0 188 aa5.72□□□□□ -1.49
PRKCB-208ENST00000487674 NDFIP1Q9BT67 221 aa5.72□□□□□ -1.49
PRKCB-208ENST00000487674 SMIM3Q9BZL3 60 aa5.72□□□□□ -1.49
PRKCB-208ENST00000487674 VPS13BQ7Z7G8 4022 aa5.71□□□□□ -1.5
PRKCB-208ENST00000487674 TRBV6-4A0A1B0GX49 114 aa5.71□□□□□ -1.5
PRKCB-208ENST00000487674 SSNA1O43805 119 aa5.71□□□□□ -1.5
PRKCB-208ENST00000487674 SMR3BP02814 79 aaPredicted RBP5.71□□□□□ -1.5
PRKCB-208ENST00000487674 RAB2AP61019 212 aa5.71□□□□□ -1.5
PRKCB-208ENST00000487674 GNG5P63218 68 aa5.71□□□□□ -1.5
PRKCB-208ENST00000487674 HAMPP81172 84 aa5.71□□□□□ -1.5
PRKCB-208ENST00000487674 LAGE3Q14657 143 aa5.71□□□□□ -1.5
PRKCB-208ENST00000487674 OR10J3Q5JRS4 329 aa5.71□□□□□ -1.5
PRKCB-208ENST00000487674 CFAP126Q5VTH2 177 aa5.71□□□□□ -1.5
PRKCB-208ENST00000487674 SLC25A29Q8N8R3 303 aa5.71□□□□□ -1.5
PRKCB-208ENST00000487674 MARVELD1Q9BSK0 173 aa5.71□□□□□ -1.5
PRKCB-208ENST00000487674 Q9HAA7 133 aa5.71□□□□□ -1.5
PRKCB-208ENST00000487674 MYCBP2O75592 4640 aa5.71□□□□□ -1.5
PRKCB-208ENST00000487674 RS1O15537 224 aa5.7□□□□□ -1.5
PRKCB-208ENST00000487674 ARL14EPLP0DKL9 152 aa5.7□□□□□ -1.5
PRKCB-208ENST00000487674 MGST1P10620 155 aaKnown RBP5.7□□□□□ -1.5
PRKCB-208ENST00000487674 LELP1Q5T871 98 aa5.7□□□□□ -1.5
PRKCB-208ENST00000487674 C5orf17Q8NAS9 161 aa5.7□□□□□ -1.5
PRKCB-208ENST00000487674 C9orf85Q96MD7 179 aa5.7□□□□□ -1.5
PRKCB-208ENST00000487674 WFDC1Q9HC57 220 aa5.7□□□□□ -1.5
PRKCB-208ENST00000487674 SRRM2Q9UQ35 2752 aaKnown RBP5.7□□□□□ -1.5
PRKCB-208ENST00000487674 K7EQM0 130 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 TAAR5O14804 337 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 HMGB3O15347 200 aaKnown RBP5.69□□□□□ -1.5
PRKCB-208ENST00000487674 IGHV3-30P01768 117 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 IGHV3-33P01772 117 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 C1QBP02746 253 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 TCRAP04437 139 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 IGHV3-30-3P0DP02 117 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 IGHV3-30-5P0DP03 117 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 CDC34P49427 236 aaPredicted RBP5.69□□□□□ -1.5
PRKCB-208ENST00000487674 ZNF80P51504 273 aaPredicted RBP5.69□□□□□ -1.5
PRKCB-208ENST00000487674 IFITM3Q01628 133 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 ZFP69Q49AA0 526 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 ZNF506Q5JVG8 444 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 DPPA3Q6W0C5 159 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 OR10G9Q8NGN4 311 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 OR10G7Q8NGN6 311 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 PTH2Q96A98 100 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 TM2D2Q9BX73 214 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 GTSF1LQ9H1H1 148 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 C11orf21Q9P2W6 132 aa5.69□□□□□ -1.5
PRKCB-208ENST00000487674 IGHV3-73A0A0B4J1V6 119 aa5.68□□□□□ -1.5
PRKCB-208ENST00000487674 GCGP01275 180 aa5.68□□□□□ -1.5
PRKCB-208ENST00000487674 STAG3L2P0CL84 134 aa5.68□□□□□ -1.5
PRKCB-208ENST00000487674 STAG3L3P0CL85 134 aa5.68□□□□□ -1.5
PRKCB-208ENST00000487674 RNASE3P12724 160 aaKnown RBP5.68□□□□□ -1.5
PRKCB-208ENST00000487674 SMUG1Q53HV7 270 aa5.68□□□□□ -1.5
PRKCB-208ENST00000487674 TMEM75Q8N9X5 138 aa5.68□□□□□ -1.5
PRKCB-208ENST00000487674 OR2G3Q8NGZ4 309 aa5.68□□□□□ -1.5
PRKCB-208ENST00000487674 ATP6V0E2Q8NHE4 81 aa5.68□□□□□ -1.5
PRKCB-208ENST00000487674 SUN5Q8TC36 379 aa5.68□□□□□ -1.5
PRKCB-208ENST00000487674 SGK494Q96LW2 274 aa5.68□□□□□ -1.5
PRKCB-208ENST00000487674 SH3BGRL3Q9H299 93 aa5.68□□□□□ -1.5
PRKCB-208ENST00000487674 PSG8Q9UQ74 426 aa5.68□□□□□ -1.5
PRKCB-208ENST00000487674 TRAV8-3A0A0A6YYJ7 113 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 PGPEP1LA6NFU8 196 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 GGTLC3B5MD39 225 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 IGLV2-11P01706 119 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 LINC00694P0DN24 101 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 GCHFRP30047 84 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 DEFA1P59665 94 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 DEFA3P59666 94 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 FLI1Q01543 452 aaPredicted RBP5.67□□□□□ -1.5
PRKCB-208ENST00000487674 PIK3CD-AS1Q5SR53 167 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 ZFP2Q6ZN57 461 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 Q6ZSA8 131 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 PRNTQ86SH4 94 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 CYB561D1Q8N8Q1 229 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 RAB24Q969Q5 203 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 PSMG3Q9BT73 122 aaPredicted RBP5.67□□□□□ -1.5
PRKCB-208ENST00000487674 PARLQ9H300 379 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 FAM30AQ9NZY2 134 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 UBR4Q5T4S7 5183 aa5.67□□□□□ -1.5
PRKCB-208ENST00000487674 A8MWV9 139 aa5.66□□□□□ -1.5
PRKCB-208ENST00000487674 MBP02144 154 aa5.66□□□□□ -1.5
PRKCB-208ENST00000487674 PLA2G1BP04054 148 aaKnown RBP5.66□□□□□ -1.5
PRKCB-208ENST00000487674 WFDC2Q14508 124 aa5.66□□□□□ -1.5
PRKCB-208ENST00000487674 TOR2AQ5JU69 321 aa5.66□□□□□ -1.5
PRKCB-208ENST00000487674 SAPCD1Q5SSQ6 148 aa5.66□□□□□ -1.5
PRKCB-208ENST00000487674 HSD17B11Q8NBQ5 300 aa5.66□□□□□ -1.5
PRKCB-208ENST00000487674 TMEM167BQ9NRX6 74 aa5.66□□□□□ -1.5
PRKCB-208ENST00000487674 EPDR1Q9UM22 224 aa5.66□□□□□ -1.5
PRKCB-208ENST00000487674 A0A087WWC5 75 aa5.65□□□□□ -1.5
PRKCB-208ENST00000487674 GAGE12JA6NER3 117 aa5.65□□□□□ -1.5
PRKCB-208ENST00000487674 CXorf1O96002 111 aa5.65□□□□□ -1.5
PRKCB-208ENST00000487674 ATP6V0CP27449 155 aa5.65□□□□□ -1.5
PRKCB-208ENST00000487674 ASIPP42127 132 aa5.65□□□□□ -1.5
PRKCB-208ENST00000487674 SUMO1P63165 101 aaKnown RBP5.65□□□□□ -1.5
PRKCB-208ENST00000487674 SERF2P84101 59 aa5.65□□□□□ -1.5
PRKCB-208ENST00000487674 GAGE1Q13065 139 aa5.65□□□□□ -1.5
PRKCB-208ENST00000487674 GAGE4Q13068 117 aa5.65□□□□□ -1.5
PRKCB-208ENST00000487674 GAGE5Q13069 117 aa5.65□□□□□ -1.5
PRKCB-208ENST00000487674 GAGE13Q4V321 117 aa5.65□□□□□ -1.5
PRKCB-208ENST00000487674 AQP10Q96PS8 301 aa5.65□□□□□ -1.5
PRKCB-208ENST00000487674 IGKV3D-20A0A0C4DH25 116 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms