RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 PEA15Q15121 130 aa13.72□□□□□ -0.21
SEC22A-208ENST00000487572 DNLZQ5SXM8 178 aa13.72□□□□□ -0.21
SEC22A-208ENST00000487572 POM121L12Q8N7R1 296 aa13.72□□□□□ -0.21
SEC22A-208ENST00000487572 BIN3Q9NQY0 253 aa13.72□□□□□ -0.21
SEC22A-208ENST00000487572 PLECQ15149 4684 aaKnown RBP13.72□□□□□ -0.21
SEC22A-208ENST00000487572 TRAV4A0A0B4J268 109 aa13.71□□□□□ -0.21
SEC22A-208ENST00000487572 TRGV4A0A0C4DH28 118 aa13.71□□□□□ -0.21
SEC22A-208ENST00000487572 K7EN84 100 aa13.71□□□□□ -0.21
SEC22A-208ENST00000487572 NDUFS6O75380 124 aaKnown RBP13.71□□□□□ -0.21
SEC22A-208ENST00000487572 P01737 135 aa13.71□□□□□ -0.21
SEC22A-208ENST00000487572 OR2D3Q8NGH3 330 aa13.71□□□□□ -0.21
SEC22A-208ENST00000487572 PHLDA3Q9Y5J5 127 aa13.71□□□□□ -0.21
SEC22A-208ENST00000487572 C19orf71A6NCJ1 209 aa13.7□□□□□ -0.22
SEC22A-208ENST00000487572 ZNF727A8MUV8 499 aa13.7□□□□□ -0.22
SEC22A-208ENST00000487572 C9JQL5 133 aa13.7□□□□□ -0.22
SEC22A-208ENST00000487572 FHL2Q14192 279 aa13.7□□□□□ -0.22
SEC22A-208ENST00000487572 C15orf53Q8NAA6 179 aa13.7□□□□□ -0.22
SEC22A-208ENST00000487572 GZMBP10144 247 aa13.69□□□□□ -0.22
SEC22A-208ENST00000487572 SYT8Q8NBV8 401 aa13.69□□□□□ -0.22
SEC22A-208ENST00000487572 PTH2Q96A98 100 aa13.69□□□□□ -0.22
SEC22A-208ENST00000487572 IGHV3-73A0A0B4J1V6 119 aa13.68□□□□□ -0.22
SEC22A-208ENST00000487572 M0R381 172 aa13.68□□□□□ -0.22
SEC22A-208ENST00000487572 RS1O15537 224 aa13.68□□□□□ -0.22
SEC22A-208ENST00000487572 CXCL1P09341 107 aa13.68□□□□□ -0.22
SEC22A-208ENST00000487572 CFAP126Q5VTH2 177 aa13.68□□□□□ -0.22
SEC22A-208ENST00000487572 LGALS9CQ6DKI2 356 aa13.68□□□□□ -0.22
SEC22A-208ENST00000487572 NUDT10Q8NFP7 164 aa13.68□□□□□ -0.22
SEC22A-208ENST00000487572 NUDT11Q96G61 164 aa13.68□□□□□ -0.22
SEC22A-208ENST00000487572 RNASE7Q9H1E1 156 aaKnown RBP13.68□□□□□ -0.22
SEC22A-208ENST00000487572 SCRT2Q9NQ03 307 aa13.68□□□□□ -0.22
SEC22A-208ENST00000487572 HHLA3Q9XRX5 114 aa13.68□□□□□ -0.22
SEC22A-208ENST00000487572 KMT2CQ8NEZ4 4911 aaKnown RBP13.68□□□□□ -0.22
SEC22A-208ENST00000487572 ALMS1Q8TCU4 4167 aa13.67□□□□□ -0.22
SEC22A-208ENST00000487572 MUC4Q99102 2169 aa13.67□□□□□ -0.22
SEC22A-208ENST00000487572 MUC21A0A0G2JKD1 596 aa13.67□□□□□ -0.22
SEC22A-208ENST00000487572 MUC21A0A140T8X8 626 aa13.67□□□□□ -0.22
SEC22A-208ENST00000487572 PAX4O43316 350 aa13.67□□□□□ -0.22
SEC22A-208ENST00000487572 RPS20P60866 119 aaKnown RBP13.67□□□□□ -0.22
SEC22A-208ENST00000487572 CLLU1Q5K131 121 aa13.67□□□□□ -0.22
SEC22A-208ENST00000487572 DMRTA1Q5VZB9 504 aa13.67□□□□□ -0.22
SEC22A-208ENST00000487572 VSIG2Q96IQ7 327 aa13.67□□□□□ -0.22
SEC22A-208ENST00000487572 PRO0255Q9UI72 69 aa13.67□□□□□ -0.22
SEC22A-208ENST00000487572 LYSTQ99698 3801 aa13.66□□□□□ -0.22
SEC22A-208ENST00000487572 MED14OSP0DP75 135 aa13.66□□□□□ -0.22
SEC22A-208ENST00000487572 CRYBA4P53673 196 aa13.66□□□□□ -0.22
SEC22A-208ENST00000487572 SSTP61278 116 aa13.66□□□□□ -0.22
SEC22A-208ENST00000487572 ZFP82Q8N141 532 aa13.66□□□□□ -0.22
SEC22A-208ENST00000487572 OR10AG1Q8NH19 301 aa13.66□□□□□ -0.22
SEC22A-208ENST00000487572 TPPP3Q9BW30 176 aa13.66□□□□□ -0.22
SEC22A-208ENST00000487572 SMDT1Q9H4I9 107 aa13.66□□□□□ -0.22
SEC22A-208ENST00000487572 JPT2Q9H910 190 aa13.66□□□□□ -0.22
SEC22A-208ENST00000487572 P0DMU3 169 aa13.65□□□□□ -0.22
SEC22A-208ENST00000487572 FAM231AP0DMU4 169 aa13.65□□□□□ -0.22
SEC22A-208ENST00000487572 FAM231CP0DMU5 169 aa13.65□□□□□ -0.22
SEC22A-208ENST00000487572 SLAQ13239 276 aa13.65□□□□□ -0.22
SEC22A-208ENST00000487572 UBE2DNLQ8IWF7 75 aa13.65□□□□□ -0.22
SEC22A-208ENST00000487572 RPP21Q9H633 154 aaKnown RBP13.65□□□□□ -0.22
SEC22A-208ENST00000487572 LY96Q9Y6Y9 160 aa13.65□□□□□ -0.22
SEC22A-208ENST00000487572 XKRY2A2RUG3 117 aa13.64□□□□□ -0.23
SEC22A-208ENST00000487572 A8MWV9 139 aa13.64□□□□□ -0.23
SEC22A-208ENST00000487572 H3BNG1 76 aa13.64□□□□□ -0.23
SEC22A-208ENST00000487572 FAM74A3Q4VXF1 159 aa13.64□□□□□ -0.23
SEC22A-208ENST00000487572 PIK3CD-AS1Q5SR53 167 aa13.64□□□□□ -0.23
SEC22A-208ENST00000487572 LINC01551Q86U37 167 aa13.64□□□□□ -0.23
SEC22A-208ENST00000487572 SNAI2O43623 268 aa13.63□□□□□ -0.23
SEC22A-208ENST00000487572 OR5AL1P0C617 328 aa13.63□□□□□ -0.23
SEC22A-208ENST00000487572 ERVFC1-1P60608 527 aa13.63□□□□□ -0.23
SEC22A-208ENST00000487572 TMEM241Q24JQ0 296 aa13.63□□□□□ -0.23
SEC22A-208ENST00000487572 SPANXN1Q5VSR9 72 aa13.63□□□□□ -0.23
SEC22A-208ENST00000487572 FER1L6-AS1Q8NA97 138 aa13.63□□□□□ -0.23
SEC22A-208ENST00000487572 SSBP4Q9BWG4 385 aaPredicted RBP13.63□□□□□ -0.23
SEC22A-208ENST00000487572 SAMD10Q9BYL1 202 aa13.63□□□□□ -0.23
SEC22A-208ENST00000487572 GATCO43716 136 aaKnown RBP13.62□□□□□ -0.23
SEC22A-208ENST00000487572 IGLC6P0CF74 106 aa13.62□□□□□ -0.23
SEC22A-208ENST00000487572 GATA1P15976 413 aaPredicted RBP13.62□□□□□ -0.23
SEC22A-208ENST00000487572 SOHLH1Q5JUK2 328 aa13.62□□□□□ -0.23
SEC22A-208ENST00000487572 FAM74A4Q5TZK3 123 aa13.62□□□□□ -0.23
SEC22A-208ENST00000487572 ICOSQ9Y6W8 199 aa13.62□□□□□ -0.23
SEC22A-208ENST00000487572 A0A087WWL8 130 aa13.61□□□□□ -0.23
SEC22A-208ENST00000487572 A0A096LPF7 62 aa13.61□□□□□ -0.23
SEC22A-208ENST00000487572 SFRP2Q96HF1 295 aa13.61□□□□□ -0.23
SEC22A-208ENST00000487572 NAT8Q9UHE5 227 aa13.61□□□□□ -0.23
SEC22A-208ENST00000487572 CIDEAO60543 219 aa13.6□□□□□ -0.23
SEC22A-208ENST00000487572 NXPH4O95158 308 aa13.6□□□□□ -0.23
SEC22A-208ENST00000487572 GYPEP15421 78 aa13.6□□□□□ -0.23
SEC22A-208ENST00000487572 ADIRFQ15847 76 aa13.6□□□□□ -0.23
SEC22A-208ENST00000487572 FAM231DQ6ZW35 169 aa13.6□□□□□ -0.23
SEC22A-208ENST00000487572 LOC100131303A0A0U1RQF7 123 aa13.59□□□□□ -0.23
SEC22A-208ENST00000487572 RPL23P62829 140 aaKnown RBP13.59□□□□□ -0.23
SEC22A-208ENST00000487572 LYZL1Q6UWQ5 148 aa13.59□□□□□ -0.23
SEC22A-208ENST00000487572 ZFP2Q6ZN57 461 aa13.59□□□□□ -0.23
SEC22A-208ENST00000487572 SLC25A29Q8N8R3 303 aa13.59□□□□□ -0.23
SEC22A-208ENST00000487572 CCL18P55774 89 aa13.58□□□□□ -0.24
SEC22A-208ENST00000487572 UFSP1Q6NVU6 142 aa13.58□□□□□ -0.24
SEC22A-208ENST00000487572 Q6ZSN1 163 aa13.58□□□□□ -0.24
SEC22A-208ENST00000487572 NACAE9PAV3 2078 aa13.58□□□□□ -0.24
SEC22A-208ENST00000487572 DNAH1Q9P2D7 4330 aa13.58□□□□□ -0.24
SEC22A-208ENST00000487572 A0A1W2PPQ1 181 aa13.57□□□□□ -0.24
SEC22A-208ENST00000487572 K7EQD1 137 aa13.57□□□□□ -0.24
SEC22A-208ENST00000487572 RHODO00212 210 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms