RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 RS1O15537 224 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 ORM1P02763 201 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 DEFB130BP0DP73 79 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 DEFB130AP0DP74 79 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 RNF212Q495C1 297 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 ZNF876PQ49A33 203 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 UFSP1Q6NVU6 142 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 LINC01551Q86U37 167 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 POM121L12Q8N7R1 296 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 SYT8Q8NBV8 401 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 SMIM7Q9BQ49 75 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 GFRA4Q9GZZ7 299 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 OSTCQ9NRP0 149 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 PRO0255Q9UI72 69 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 NAGKQ9UJ70 344 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 PLECQ15149 4684 aaKnown RBP4.67□□□□□ -1.66
PTPRE-209ENST00000487428 TRAV26-1A0A087WT03 109 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 LCE6AA0A183 80 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 TRBV6-4A0A1B0GX49 114 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 GAGE12BA1L429 117 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 ZNF727A8MUV8 499 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 K7EN84 100 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 GAGE7O76087 117 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 P01737 135 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 ARMS2P0C7Q2 107 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 GAGE12FP0CL80 117 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 GAGE12GP0CL81 117 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 GAGE12IP0CL82 117 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 MGST1P10620 155 aaKnown RBP4.66□□□□□ -1.66
PTPRE-209ENST00000487428 S100A4P26447 101 aaKnown RBP4.66□□□□□ -1.66
PTPRE-209ENST00000487428 CTRLP40313 264 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 TIRAPP58753 221 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 PNRC1Q12796 327 aaPredicted RBP4.66□□□□□ -1.66
PTPRE-209ENST00000487428 FHL2Q14192 279 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 TMEM241Q24JQ0 296 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 SH2D6Q7Z4S9 175 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 ZFP82Q8N141 532 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 NHLRC2Q8NBF2 726 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 NUDT10Q8NFP7 164 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 FRZBQ92765 325 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 DAZAP1Q96EP5 407 aaKnown RBP4.66□□□□□ -1.66
PTPRE-209ENST00000487428 NUDT11Q96G61 164 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 SFRP2Q96HF1 295 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 NAT8Q9UHE5 227 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 DNAH1Q9P2D7 4330 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 DNAH6Q9C0G6 4158 aa4.66□□□□□ -1.66
PTPRE-209ENST00000487428 ALMS1Q8TCU4 4167 aa4.65□□□□□ -1.66
PTPRE-209ENST00000487428 LINC00862A6NCI5 91 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 A8MWL6 223 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 C9JQL5 133 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 P0DMU3 169 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 FAM231AP0DMU4 169 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 FAM231CP0DMU5 169 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 GATA1P15976 413 aaPredicted RBP4.65□□□□□ -1.67
PTPRE-209ENST00000487428 HOXA5P20719 270 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 CRYBA4P53673 196 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 CACNG7P62955 275 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 OR5I1Q13606 314 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 SOHLH1Q5JUK2 328 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 CFAP126Q5VTH2 177 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 ZFAND6Q6FIF0 208 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 LINC00476Q8WZB0 136 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 ISOC2Q96AB3 205 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 VSIG2Q96IQ7 327 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 RPP21Q9H633 154 aaKnown RBP4.65□□□□□ -1.67
PTPRE-209ENST00000487428 MRPL16Q9NX20 251 aaKnown RBP4.65□□□□□ -1.67
PTPRE-209ENST00000487428 PHLDA3Q9Y5J5 127 aa4.65□□□□□ -1.67
PTPRE-209ENST00000487428 KMT2CQ8NEZ4 4911 aaKnown RBP4.65□□□□□ -1.67
PTPRE-209ENST00000487428 TRBV10-1A0A0K0K1A3 114 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 IGLL5B9A064 214 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 F5H768 121 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 H3BVH4 76 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 K7EP13 123 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 M0R036 132 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 IGHV3-53P01767 116 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 CRYGDP07320 174 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 BTF3P20290 206 aaKnown RBP4.64□□□□□ -1.67
PTPRE-209ENST00000487428 RPL23P62829 140 aaKnown RBP4.64□□□□□ -1.67
PTPRE-209ENST00000487428 SRSF3P84103 164 aaKnown RBP4.64□□□□□ -1.67
PTPRE-209ENST00000487428 MRPL23Q16540 153 aaKnown RBP4.64□□□□□ -1.67
PTPRE-209ENST00000487428 DMRTA1Q5VZB9 504 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 PRR27Q6MZM9 219 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 TMEM88Q6PEY1 159 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 FER1L6-AS1Q8NA97 138 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 OR4C5Q8NGB2 326 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 OR2D3Q8NGH3 330 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 ZNF479Q96JC4 524 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 UPK3BQ9BT76 320 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 HHLA3Q9XRX5 114 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 KMT2AQ03164 3969 aa4.64□□□□□ -1.67
PTPRE-209ENST00000487428 VPS13DQ5THJ4 4388 aa4.63□□□□□ -1.67
PTPRE-209ENST00000487428 LINC00694P0DN24 101 aa4.63□□□□□ -1.67
PTPRE-209ENST00000487428 RPL19P84098 196 aaKnown RBP4.63□□□□□ -1.67
PTPRE-209ENST00000487428 RHOHQ15669 191 aa4.63□□□□□ -1.67
PTPRE-209ENST00000487428 C10orf91Q5T1B1 145 aa4.63□□□□□ -1.67
PTPRE-209ENST00000487428 C15orf54Q8N8G6 183 aa4.63□□□□□ -1.67
PTPRE-209ENST00000487428 OR10G8Q8NGN5 311 aa4.63□□□□□ -1.67
PTPRE-209ENST00000487428 OR10AG1Q8NH19 301 aa4.63□□□□□ -1.67
PTPRE-209ENST00000487428 TSKUQ8WUA8 353 aa4.63□□□□□ -1.67
PTPRE-209ENST00000487428 PCNPQ8WW12 178 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms