RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 IGKV3D-20A0A0C4DH25 116 aa12.94□□□□□ -0.34
CLIP2-206ENST00000487091 MAP1LC3B2A6NCE7 125 aa12.94□□□□□ -0.34
CLIP2-206ENST00000487091 EREGO14944 169 aa12.94□□□□□ -0.34
CLIP2-206ENST00000487091 RHOHQ15669 191 aa12.94□□□□□ -0.34
CLIP2-206ENST00000487091 Q86TA4 180 aa12.94□□□□□ -0.34
CLIP2-206ENST00000487091 C10orf126Q8N4M7 172 aa12.94□□□□□ -0.34
CLIP2-206ENST00000487091 MAP1LC3BQ9GZQ8 125 aa12.94□□□□□ -0.34
CLIP2-206ENST00000487091 PGPEP1Q9NXJ5 209 aa12.94□□□□□ -0.34
CLIP2-206ENST00000487091 MSRB1Q9NZV6 116 aa12.94□□□□□ -0.34
CLIP2-206ENST00000487091 BOLA1Q9Y3E2 137 aa12.94□□□□□ -0.34
CLIP2-206ENST00000487091 MGST1P10620 155 aaKnown RBP12.93□□□□□ -0.34
CLIP2-206ENST00000487091 S100A4P26447 101 aaKnown RBP12.93□□□□□ -0.34
CLIP2-206ENST00000487091 ERVFC1-1P60608 527 aa12.93□□□□□ -0.34
CLIP2-206ENST00000487091 COX8CQ7Z4L0 72 aa12.93□□□□□ -0.34
CLIP2-206ENST00000487091 STOML3Q8TAV4 291 aa12.93□□□□□ -0.34
CLIP2-206ENST00000487091 ZFP30Q9Y2G7 519 aa12.93□□□□□ -0.34
CLIP2-206ENST00000487091 FHITP49789 147 aa12.92□□□□□ -0.34
CLIP2-206ENST00000487091 ZNF345Q14585 488 aa12.92□□□□□ -0.34
CLIP2-206ENST00000487091 KCNRGQ8N5I3 272 aa12.92□□□□□ -0.34
CLIP2-206ENST00000487091 TCEAL7Q9BRU2 100 aa12.92□□□□□ -0.34
CLIP2-206ENST00000487091 IGHV3-73A0A0B4J1V6 119 aa12.91□□□□□ -0.34
CLIP2-206ENST00000487091 IGHV3-38A0A0C4DH36 116 aa12.91□□□□□ -0.34
CLIP2-206ENST00000487091 A8MWV9 139 aa12.91□□□□□ -0.34
CLIP2-206ENST00000487091 CRYGDP07320 174 aa12.91□□□□□ -0.34
CLIP2-206ENST00000487091 ASIPP42127 132 aa12.91□□□□□ -0.34
CLIP2-206ENST00000487091 ZFP2Q6ZN57 461 aa12.91□□□□□ -0.34
CLIP2-206ENST00000487091 FMC1Q96HJ9 113 aa12.91□□□□□ -0.34
CLIP2-206ENST00000487091 IL36BQ9NZH7 164 aa12.91□□□□□ -0.34
CLIP2-206ENST00000487091 TRBV6-1A0A0K0K1D8 114 aa12.9□□□□□ -0.34
CLIP2-206ENST00000487091 B4DEV8 164 aa12.9□□□□□ -0.34
CLIP2-206ENST00000487091 SMLR1H3BR10 107 aa12.9□□□□□ -0.34
CLIP2-206ENST00000487091 CRIP1P50238 77 aa12.9□□□□□ -0.34
CLIP2-206ENST00000487091 LINC01556Q5JQF7 62 aa12.9□□□□□ -0.34
CLIP2-206ENST00000487091 DNLZQ5SXM8 178 aa12.9□□□□□ -0.34
CLIP2-206ENST00000487091 KRTAP4-5Q9BYR2 181 aa12.9□□□□□ -0.34
CLIP2-206ENST00000487091 TRAV8-6A0A0B4J262 113 aa12.89□□□□□ -0.35
CLIP2-206ENST00000487091 HMSDA8MTL9 139 aa12.89□□□□□ -0.35
CLIP2-206ENST00000487091 SEC11BP0C7V7 166 aa12.89□□□□□ -0.35
CLIP2-206ENST00000487091 CDPF1Q6NVV7 123 aa12.89□□□□□ -0.35
CLIP2-206ENST00000487091 ZC2HC1AQ96GY0 325 aa12.89□□□□□ -0.35
CLIP2-206ENST00000487091 PARLQ9H300 379 aa12.89□□□□□ -0.35
CLIP2-206ENST00000487091 A0A087WTM6 91 aa12.88□□□□□ -0.35
CLIP2-206ENST00000487091 UMAD1C9J7I0 102 aa12.88□□□□□ -0.35
CLIP2-206ENST00000487091 KRBOX1C9JBD0 128 aa12.88□□□□□ -0.35
CLIP2-206ENST00000487091 UBE2G1P62253 170 aa12.88□□□□□ -0.35
CLIP2-206ENST00000487091 LGALSLQ3ZCW2 172 aaPredicted RBP12.88□□□□□ -0.35
CLIP2-206ENST00000487091 LELP1Q5T871 98 aa12.88□□□□□ -0.35
CLIP2-206ENST00000487091 CST9LP1Q5W188 147 aa12.88□□□□□ -0.35
CLIP2-206ENST00000487091 MAPKAPK5-AS1Q8N8E1 139 aa12.88□□□□□ -0.35
CLIP2-206ENST00000487091 ATP6V0E2Q8NHE4 81 aa12.88□□□□□ -0.35
CLIP2-206ENST00000487091 GTSF1LQ9H1H1 148 aa12.88□□□□□ -0.35
CLIP2-206ENST00000487091 DNAH5Q8TE73 4624 aa12.88□□□□□ -0.35
CLIP2-206ENST00000487091 APOBP04114 4563 aaKnown RBP12.88□□□□□ -0.35
CLIP2-206ENST00000487091 A0A0D9SG52 128 aa12.87□□□□□ -0.35
CLIP2-206ENST00000487091 OR10J3Q5JRS4 329 aa12.87□□□□□ -0.35
CLIP2-206ENST00000487091 FAM162BQ5T6X4 162 aa12.87□□□□□ -0.35
CLIP2-206ENST00000487091 OR11H4Q8NGC9 324 aa12.87□□□□□ -0.35
CLIP2-206ENST00000487091 MBD3L1Q8WWY6 194 aa12.87□□□□□ -0.35
CLIP2-206ENST00000487091 SH2D1AO60880 128 aa12.86□□□□□ -0.35
CLIP2-206ENST00000487091 LTAP01374 205 aa12.86□□□□□ -0.35
CLIP2-206ENST00000487091 ZNF674Q2M3X9 581 aa12.86□□□□□ -0.35
CLIP2-206ENST00000487091 Q6ZSN1 163 aa12.86□□□□□ -0.35
CLIP2-206ENST00000487091 IBA57-AS1B1ANH7 110 aa12.85□□□□□ -0.35
CLIP2-206ENST00000487091 H3BVH4 76 aa12.85□□□□□ -0.35
CLIP2-206ENST00000487091 M0R036 132 aa12.85□□□□□ -0.35
CLIP2-206ENST00000487091 PAGE4O60829 102 aa12.85□□□□□ -0.35
CLIP2-206ENST00000487091 ARMS2P0C7Q2 107 aa12.85□□□□□ -0.35
CLIP2-206ENST00000487091 DMRTA1Q5VZB9 504 aa12.85□□□□□ -0.35
CLIP2-206ENST00000487091 UFSP1Q6NVU6 142 aa12.85□□□□□ -0.35
CLIP2-206ENST00000487091 Q8N1X5 172 aa12.85□□□□□ -0.35
CLIP2-206ENST00000487091 SYT8Q8NBV8 401 aa12.85□□□□□ -0.35
CLIP2-206ENST00000487091 SFT2D1Q8WV19 159 aa12.85□□□□□ -0.35
CLIP2-206ENST00000487091 KANTRA0A1W2PQU2 76 aa12.84□□□□□ -0.35
CLIP2-206ENST00000487091 RHODO00212 210 aa12.84□□□□□ -0.35
CLIP2-206ENST00000487091 AKR1C3P42330 323 aa12.84□□□□□ -0.35
CLIP2-206ENST00000487091 LINC01559Q495D7 138 aa12.84□□□□□ -0.35
CLIP2-206ENST00000487091 FAM213BQ8TBF2 198 aa12.84□□□□□ -0.35
CLIP2-206ENST00000487091 ZNF471Q9BX82 626 aaPredicted RBP12.84□□□□□ -0.35
CLIP2-206ENST00000487091 JPT2Q9H910 190 aa12.84□□□□□ -0.35
CLIP2-206ENST00000487091 SCRT2Q9NQ03 307 aa12.84□□□□□ -0.35
CLIP2-206ENST00000487091 ABCA13Q86UQ4 5058 aa12.84□□□□□ -0.35
CLIP2-206ENST00000487091 BCL2L11O43521 198 aa12.83□□□□□ -0.36
CLIP2-206ENST00000487091 S100A9P06702 114 aaKnown RBP12.83□□□□□ -0.36
CLIP2-206ENST00000487091 LINC00694P0DN24 101 aa12.83□□□□□ -0.36
CLIP2-206ENST00000487091 EIF5AP63241 154 aaKnown RBP12.83□□□□□ -0.36
CLIP2-206ENST00000487091 SAMD10Q9BYL1 202 aa12.83□□□□□ -0.36
CLIP2-206ENST00000487091 GRIFINA4D1Z8 144 aa12.82□□□□□ -0.36
CLIP2-206ENST00000487091 PHLDA3Q9Y5J5 127 aa12.82□□□□□ -0.36
CLIP2-206ENST00000487091 GAGE12JA6NER3 117 aa12.81□□□□□ -0.36
CLIP2-206ENST00000487091 TPT1P13693 172 aaKnown RBP12.81□□□□□ -0.36
CLIP2-206ENST00000487091 FUSP35637 526 aaKnown RBP eCLIP12.81□□□□□ -0.36
CLIP2-206ENST00000487091 GAGE1Q13065 139 aa12.81□□□□□ -0.36
CLIP2-206ENST00000487091 GAGE4Q13068 117 aa12.81□□□□□ -0.36
CLIP2-206ENST00000487091 GAGE5Q13069 117 aa12.81□□□□□ -0.36
CLIP2-206ENST00000487091 GAGE13Q4V321 117 aa12.81□□□□□ -0.36
CLIP2-206ENST00000487091 SFRP2Q96HF1 295 aa12.81□□□□□ -0.36
CLIP2-206ENST00000487091 PSCAO43653 123 aa12.8□□□□□ -0.36
CLIP2-206ENST00000487091 IGHV3-30P01768 117 aa12.8□□□□□ -0.36
CLIP2-206ENST00000487091 IGHV3-33P01772 117 aa12.8□□□□□ -0.36
CLIP2-206ENST00000487091 IGHV3-30-3P0DP02 117 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms