RNA–Protein interactions for RNA: ENST00000486708.1

SFI1-224, Transcript of SFI1 centrin binding protein, human

TSL 2

Gene SFI1, Length 651 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-224	ENST00000486708	PTH2	Q96A98	100 aa		3.22	□□□□□ -1.89
SFI1-224	ENST00000486708	RITA1	Q96K30	269 aa		3.22	□□□□□ -1.89
SFI1-224	ENST00000486708	CARD19	Q96LW7	228 aa		3.22	□□□□□ -1.89
SFI1-224	ENST00000486708	CITED1	Q99966	193 aa		3.22	□□□□□ -1.89
SFI1-224	ENST00000486708	VCX2	Q9H322	139 aa		3.22	□□□□□ -1.89
SFI1-224	ENST00000486708	MRPL35	Q9NZE8	188 aa	Known RBP	3.22	□□□□□ -1.89
SFI1-224	ENST00000486708	HHLA3	Q9XRX5	114 aa		3.22	□□□□□ -1.89
SFI1-224	ENST00000486708	RAI1	Q7Z5J4	1906 aa	Predicted RBP	3.22	□□□□□ -1.89
SFI1-224	ENST00000486708	SPG11	Q96JI7	2443 aa		3.22	□□□□□ -1.89
SFI1-224	ENST00000486708	MED12L	Q86YW9	2145 aa		3.22	□□□□□ -1.89
SFI1-224	ENST00000486708	POLQ	O75417	2590 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	TRBV19	A0A075B6N1	114 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	TRAV40	A0A0B4J280	105 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	LOC107984156	A0A0G2JMH3	177 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	LINC01546	A6NGU7	62 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	LINC01549	A6NIU2	74 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	LINC01548	A6NM66	108 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	CCDC179	H3BU77	68 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	TNFRSF13B	O14836	293 aa	Predicted RBP	3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	LY6H	O94772	140 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	NDUFA3	O95167	84 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	GAS8-AS1	O95177	125 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	LGALS1	P09382	135 aa	Known RBP	3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	APELA	P0DMC3	54 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	FAM201A	Q5SY85	155 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	LYRM7	Q5U5X0	104 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	SFTA2	Q6UW10	78 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	SIGLEC15	Q6ZMC9	328 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	TEN1	Q86WV5	123 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	ZNF575	Q86XF7	245 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	ARL17A	Q8IVW1	177 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	SMIM20	Q8N5G0	67 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	ANKRD29	Q8N6D5	301 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	FAM216B	Q8N7L0	139 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708		Q8N8P6	123 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	MAPK1IP1L	Q8NDC0	245 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	SPATA3	Q8NHX4	192 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	TMEM190	Q8WZ59	177 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	RPE	Q96AT9	228 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	RNF185	Q96GF1	192 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	GAFA1	Q96PS6	74 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	KIR2DL4	Q99706	377 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	SRSF8	Q9BRL6	282 aa	Known RBP	3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	NXT2	Q9NPJ8	142 aa	Known RBP	3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	RPUSD1	Q9UJJ7	312 aa	Known RBP	3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	DNAJC13	O75165	2243 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	PDZD2	O15018	2839 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	ABCA2	Q9BZC7	2435 aa		3.21	□□□□□ -1.9
SFI1-224	ENST00000486708	F8	P00451	2351 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	3.2	□□□□□ -1.9
SFI1-224	ENST00000486708		A0A087WX48	190 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	MYMX	A0A1B0GTQ4	84 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	GAGE12J	A6NER3	117 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708		A8MWV9	139 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708		H3BRN7	92 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	TMEM178B	H3BS89	294 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708		H3BVH4	76 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708		M0R3E3	92 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	FCN3	O75636	299 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	GAGE7	O76087	117 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	IGKV2D-40	P01614	121 aa	Predicted RBP	3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	IGLV2-23	P01705	113 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	IGLC6	P0CF74	106 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	NHLRC4	P0CG21	123 aa	Predicted RBP	3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	GAGE12F	P0CL80	117 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	GAGE12G	P0CL81	117 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	GAGE12I	P0CL82	117 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	GATA1	P15976	413 aa	Predicted RBP	3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	PLN	P26678	52 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	ARL3	P36405	182 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	RPL27A	P46776	148 aa	Known RBP	3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	NDUFV3	P56181	108 aa	Known RBP	3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	LMO4	P61968	165 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	RPL32	P62910	135 aa	Known RBP	3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	GAGE4	Q13068	117 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	DIAPH2-AS1	Q14236	149 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	VMA21	Q3ZAQ7	101 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	PVRIG	Q6DKI7	326 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	DEFB108B	Q8NET1	73 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	MYOZ3	Q8TDC0	251 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	LINC00476	Q8WZB0	136 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	PLEKHB2	Q96CS7	222 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	C17orf77	Q96MU5	243 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	CCL13	Q99616	98 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	SHANK2-AS3	Q9BTD1	123 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	HIF1AN	Q9NWT6	349 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	AKAP9	Q99996	3911 aa		3.2	□□□□□ -1.9
SFI1-224	ENST00000486708	INTS1	Q8N201	2190 aa	Known RBP	3.19	□□□□□ -1.9
SFI1-224	ENST00000486708	ABCA4	P78363	2273 aa		3.19	□□□□□ -1.9
SFI1-224	ENST00000486708	UTP20	O75691	2785 aa	Known RBP	3.19	□□□□□ -1.9
SFI1-224	ENST00000486708	PCNX1	Q96RV3	2341 aa		3.19	□□□□□ -1.9
SFI1-224	ENST00000486708	MTOR	P42345	2549 aa		3.19	□□□□□ -1.9
SFI1-224	ENST00000486708	FABP5P3	A8MUU1	101 aa		3.19	□□□□□ -1.9
SFI1-224	ENST00000486708	TMEM262	E9PQX1	116 aa		3.19	□□□□□ -1.9
SFI1-224	ENST00000486708	LYNX1	G3V0Z9	82 aa		3.19	□□□□□ -1.9
SFI1-224	ENST00000486708		H7C1H1	209 aa		3.19	□□□□□ -1.9
SFI1-224	ENST00000486708	RHOD	O00212	210 aa		3.19	□□□□□ -1.9
SFI1-224	ENST00000486708	PRY	O14603	147 aa		3.19	□□□□□ -1.9
SFI1-224	ENST00000486708	ENSA	O43768	121 aa	Known RBP	3.19	□□□□□ -1.9
SFI1-224	ENST00000486708	SNCG	O76070	127 aa		3.19	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms