RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 MSMO1Q15800 293 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 RTL8BQ17RB0 113 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 LGALS9CQ6DKI2 356 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 UFSP1Q6NVU6 142 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 MRPL54Q6P161 138 aaKnown RBP5□□□□□ -1.61
HDAC3-209ENST00000486618 MORN3Q6PF18 240 aaPredicted RBP5□□□□□ -1.61
HDAC3-209ENST00000486618 TRPT1Q86TN4 253 aaKnown RBP5□□□□□ -1.61
HDAC3-209ENST00000486618 LHFPL1Q86WI0 220 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 ODF3L1Q8IXM7 274 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 DYNLRB2Q8TF09 96 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 USMG5Q96IX5 58 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 LINC01587Q99440 93 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 HIST1H2BLQ99880 126 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 SLIRPQ9GZT3 109 aaKnown RBP5□□□□□ -1.61
HDAC3-209ENST00000486618 FRAS1Q86XX4 4008 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 hDV102S1A0JD36 115 aa4.99□□□□□ -1.61
HDAC3-209ENST00000486618 H3BP45 60 aa4.99□□□□□ -1.61
HDAC3-209ENST00000486618 H3BQ15 152 aa4.99□□□□□ -1.61
HDAC3-209ENST00000486618 APOMO95445 188 aa4.99□□□□□ -1.61
HDAC3-209ENST00000486618 CD7P09564 240 aa4.99□□□□□ -1.61
HDAC3-209ENST00000486618 SNCAP37840 140 aa4.99□□□□□ -1.61
HDAC3-209ENST00000486618 FOXI1Q12951 378 aa4.99□□□□□ -1.61
HDAC3-209ENST00000486618 AMTNQ6UX39 209 aa4.99□□□□□ -1.61
HDAC3-209ENST00000486618 ATP5L2Q7Z4Y8 100 aa4.99□□□□□ -1.61
HDAC3-209ENST00000486618 PRR15Q8IV56 129 aa4.99□□□□□ -1.61
HDAC3-209ENST00000486618 TMEM183AQ8IXX5 376 aa4.99□□□□□ -1.61
HDAC3-209ENST00000486618 OR4B1Q8NGF8 309 aa4.99□□□□□ -1.61
HDAC3-209ENST00000486618 IMUPQ9GZP8 106 aa4.99□□□□□ -1.61
HDAC3-209ENST00000486618 RBM12B-AS1Q9P1G2 102 aa4.99□□□□□ -1.61
HDAC3-209ENST00000486618 CACNG5Q9UF02 275 aa4.99□□□□□ -1.61
HDAC3-209ENST00000486618 A0A0J9YWU9 116 aa4.98□□□□□ -1.61
HDAC3-209ENST00000486618 H0Y9J4 135 aa4.98□□□□□ -1.61
HDAC3-209ENST00000486618 J3QRE1 110 aa4.98□□□□□ -1.61
HDAC3-209ENST00000486618 CREBL2O60519 120 aaPredicted RBP4.98□□□□□ -1.61
HDAC3-209ENST00000486618 PGLYRP1O75594 196 aaPredicted RBP4.98□□□□□ -1.61
HDAC3-209ENST00000486618 SEC11BP0C7V7 166 aa4.98□□□□□ -1.61
HDAC3-209ENST00000486618 CACNG7P62955 275 aa4.98□□□□□ -1.61
HDAC3-209ENST00000486618 DEFB114Q30KQ6 69 aa4.98□□□□□ -1.61
HDAC3-209ENST00000486618 FAM222AQ5U5X8 452 aa4.98□□□□□ -1.61
HDAC3-209ENST00000486618 ZNF57Q68EA5 555 aaPredicted RBP4.98□□□□□ -1.61
HDAC3-209ENST00000486618 CLEC19AQ6UXS0 136 aa4.98□□□□□ -1.61
HDAC3-209ENST00000486618 NTN5Q8WTR8 489 aaPredicted RBP4.98□□□□□ -1.61
HDAC3-209ENST00000486618 CARD19Q96LW7 228 aa4.98□□□□□ -1.61
HDAC3-209ENST00000486618 SPIN2AQ99865 258 aa4.98□□□□□ -1.61
HDAC3-209ENST00000486618 SPIN2BQ9BPZ2 258 aa4.98□□□□□ -1.61
HDAC3-209ENST00000486618 PCLOQ9Y6V0 5065 aa4.97□□□□□ -1.61
HDAC3-209ENST00000486618 IGKV1D-8A0A087WSZ0 117 aa4.97□□□□□ -1.61
HDAC3-209ENST00000486618 TRAV8-1A0A0A6YYK1 113 aa4.97□□□□□ -1.61
HDAC3-209ENST00000486618 IGHV3OR16-9A0A0B4J2B5 98 aa4.97□□□□□ -1.61
HDAC3-209ENST00000486618 TRBV12-3P01733 135 aa4.97□□□□□ -1.61
HDAC3-209ENST00000486618 INPP1P49441 399 aa4.97□□□□□ -1.61
HDAC3-209ENST00000486618 RPL39P5Q59GN2 51 aa4.97□□□□□ -1.61
HDAC3-209ENST00000486618 NR2C2APQ86WQ0 139 aa4.97□□□□□ -1.61
HDAC3-209ENST00000486618 OR10J6PQ8NGY7 276 aa4.97□□□□□ -1.61
HDAC3-209ENST00000486618 PAXXQ9BUH6 204 aa4.97□□□□□ -1.61
HDAC3-209ENST00000486618 WFDC10AQ9H1F0 79 aa4.97□□□□□ -1.61
HDAC3-209ENST00000486618 ANAPC10Q9UM13 185 aa4.97□□□□□ -1.61
HDAC3-209ENST00000486618 TPRKBQ9Y3C4 175 aa4.97□□□□□ -1.61
HDAC3-209ENST00000486618 PYGO1Q9Y3Y4 419 aa4.97□□□□□ -1.61
HDAC3-209ENST00000486618 E9PLD3 99 aa4.96□□□□□ -1.62
HDAC3-209ENST00000486618 TMEM262E9PQX1 116 aa4.96□□□□□ -1.62
HDAC3-209ENST00000486618 GSTZ1O43708 216 aaPredicted RBP4.96□□□□□ -1.62
HDAC3-209ENST00000486618 MT-ND6P03923 174 aa4.96□□□□□ -1.62
HDAC3-209ENST00000486618 HERVK_113P63121 156 aa4.96□□□□□ -1.62
HDAC3-209ENST00000486618 ATP5G2Q06055 141 aa4.96□□□□□ -1.62
HDAC3-209ENST00000486618 COA6Q5JTJ3 125 aaKnown RBP4.96□□□□□ -1.62
HDAC3-209ENST00000486618 AADACL3Q5VUY0 350 aa4.96□□□□□ -1.62
HDAC3-209ENST00000486618 Q6AWC8 147 aa4.96□□□□□ -1.62
HDAC3-209ENST00000486618 TEX43Q6ZNM6 134 aa4.96□□□□□ -1.62
HDAC3-209ENST00000486618 Q6ZUT4 128 aa4.96□□□□□ -1.62
HDAC3-209ENST00000486618 PDPNQ86YL7 162 aa4.96□□□□□ -1.62
HDAC3-209ENST00000486618 MRPL30Q8TCC3 161 aaKnown RBP4.96□□□□□ -1.62
HDAC3-209ENST00000486618 RAB37Q96AX2 223 aa4.96□□□□□ -1.62
HDAC3-209ENST00000486618 ABHD14BQ96IU4 210 aa4.96□□□□□ -1.62
HDAC3-209ENST00000486618 PARP12Q9H0J9 701 aaKnown RBP4.96□□□□□ -1.62
HDAC3-209ENST00000486618 RYR1P21817 5038 aa4.96□□□□□ -1.62
HDAC3-209ENST00000486618 KMT2AQ03164 3969 aa4.96□□□□□ -1.62
HDAC3-209ENST00000486618 TRAV8-3A0A0A6YYJ7 113 aa4.95□□□□□ -1.62
HDAC3-209ENST00000486618 OR2T8A6NH00 312 aa4.95□□□□□ -1.62
HDAC3-209ENST00000486618 C2orf70A6NJV1 201 aa4.95□□□□□ -1.62
HDAC3-209ENST00000486618 FAM223BA6NKX1 122 aa4.95□□□□□ -1.62
HDAC3-209ENST00000486618 K7EP34 96 aa4.95□□□□□ -1.62
HDAC3-209ENST00000486618 M0R1X1 148 aa4.95□□□□□ -1.62
HDAC3-209ENST00000486618 BMPR1BO00238 502 aa4.95□□□□□ -1.62
HDAC3-209ENST00000486618 RBMY1A1P0DJD3 496 aaKnown RBP4.95□□□□□ -1.62
HDAC3-209ENST00000486618 RPS11P62280 158 aaKnown RBP eCLIP4.95□□□□□ -1.62
HDAC3-209ENST00000486618 RRN3P1Q2M238 152 aa4.95□□□□□ -1.62
HDAC3-209ENST00000486618 SLC25A42Q86VD7 318 aa4.95□□□□□ -1.62
HDAC3-209ENST00000486618 FAM223AQ8IWN6 122 aa4.95□□□□□ -1.62
HDAC3-209ENST00000486618 COPS9Q8WXC6 57 aa4.95□□□□□ -1.62
HDAC3-209ENST00000486618 KCNS1Q96KK3 526 aa4.95□□□□□ -1.62
HDAC3-209ENST00000486618 NAA60Q9H7X0 242 aa4.95□□□□□ -1.62
HDAC3-209ENST00000486618 MTFP1Q9UDX5 166 aa4.95□□□□□ -1.62
HDAC3-209ENST00000486618 OR2W1Q9Y3N9 320 aa4.95□□□□□ -1.62
HDAC3-209ENST00000486618 TRBV7-6A0A0J9YX20 115 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 FAM236AA0A1B0GUQ0 79 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 FAM236BA0A1B0GV22 79 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 LGALS9O00182 355 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 UQCRQO14949 82 aa4.94□□□□□ -1.62
HDAC3-209ENST00000486618 IGKV1-16P04430 117 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms