RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 TSPOP30536 169 aa15.18■□□□□ 0.02
HPS3-206ENST00000486530 LY6G6DO95868 133 aa15.17■□□□□ 0.02
HPS3-206ENST00000486530 LBHQ53QV2 105 aaPredicted RBP15.17■□□□□ 0.02
HPS3-206ENST00000486530 GATA1P15976 413 aaPredicted RBP15.16■□□□□ 0.02
HPS3-206ENST00000486530 DEFB125Q8N687 156 aa15.16■□□□□ 0.02
HPS3-206ENST00000486530 DUX3Q96PT4 197 aa15.16■□□□□ 0.02
HPS3-206ENST00000486530 DPH3P1Q9H4G8 78 aa15.16■□□□□ 0.02
HPS3-206ENST00000486530 TRAV12-3A0A0B4J271 114 aa15.16■□□□□ 0.02
HPS3-206ENST00000486530 PRSS47A8MTI9 375 aa15.16■□□□□ 0.02
HPS3-206ENST00000486530 NXPH4O95158 308 aa15.16■□□□□ 0.02
HPS3-206ENST00000486530 IGLC3P0DOY3 106 aa15.16■□□□□ 0.02
HPS3-206ENST00000486530 CDKN1BP46527 198 aa15.16■□□□□ 0.02
HPS3-206ENST00000486530 LINC01545Q5VT33 79 aa15.16■□□□□ 0.02
HPS3-206ENST00000486530 NRACQ8N912 160 aa15.16■□□□□ 0.02
HPS3-206ENST00000486530 DLX4Q92988 240 aaPredicted RBP15.16■□□□□ 0.02
HPS3-206ENST00000486530 UQCR10Q9UDW1 63 aa15.16■□□□□ 0.02
HPS3-206ENST00000486530 RNASE1P07998 156 aaKnown RBP15.15■□□□□ 0.02
HPS3-206ENST00000486530 MAJINQ3KP22 176 aa15.15■□□□□ 0.02
HPS3-206ENST00000486530 MRPL52Q86TS9 123 aaKnown RBP15.15■□□□□ 0.02
HPS3-206ENST00000486530 Q8N8P6 123 aa15.15■□□□□ 0.02
HPS3-206ENST00000486530 AP1S3Q96PC3 154 aa15.14■□□□□ 0.01
HPS3-206ENST00000486530 TRAV26-2A0A0B4J265 109 aa15.14■□□□□ 0.01
HPS3-206ENST00000486530 IGKV3-20P01619 116 aa15.14■□□□□ 0.01
HPS3-206ENST00000486530 DYNLRB2Q8TF09 96 aa15.14■□□□□ 0.01
HPS3-206ENST00000486530 H0Y8G0 127 aa15.13■□□□□ 0.01
HPS3-206ENST00000486530 IGLV2-18A0A075B6J9 118 aa15.12■□□□□ 0.01
HPS3-206ENST00000486530 CD7P09564 240 aa15.12■□□□□ 0.01
HPS3-206ENST00000486530 IGLL1P15814 213 aa15.12■□□□□ 0.01
HPS3-206ENST00000486530 TMEM61Q8N0U2 210 aa15.12■□□□□ 0.01
HPS3-206ENST00000486530 C16orf95Q9H693 158 aa15.12■□□□□ 0.01
HPS3-206ENST00000486530 AGRNO00468 2067 aa15.12■□□□□ 0.01
HPS3-206ENST00000486530 M0R143 59 aa15.12■□□□□ 0.01
HPS3-206ENST00000486530 SPRY2O43597 315 aa15.12■□□□□ 0.01
HPS3-206ENST00000486530 SPINK13Q1W4C9 94 aa15.12■□□□□ 0.01
HPS3-206ENST00000486530 AMTNQ6UX39 209 aa15.12■□□□□ 0.01
HPS3-206ENST00000486530 C2orf88Q9BSF0 95 aa15.12■□□□□ 0.01
HPS3-206ENST00000486530 MUC4Q99102 2169 aa15.11■□□□□ 0.01
HPS3-206ENST00000486530 OTOGQ6ZRI0 2925 aa15.11■□□□□ 0.01
HPS3-206ENST00000486530 TRAV12-2A0A075B6T6 113 aa15.11■□□□□ 0.01
HPS3-206ENST00000486530 FCER1GP30273 86 aa15.11■□□□□ 0.01
HPS3-206ENST00000486530 FXYD7P58549 80 aa15.11■□□□□ 0.01
HPS3-206ENST00000486530 C14orf178Q8N769 122 aaPredicted RBP15.11■□□□□ 0.01
HPS3-206ENST00000486530 CUBNO60494 3623 aa15.11■□□□□ 0.01
HPS3-206ENST00000486530 HSBP1L1C9JCN9 74 aa15.1■□□□□ 0.01
HPS3-206ENST00000486530 EREGO14944 169 aa15.1■□□□□ 0.01
HPS3-206ENST00000486530 DEFB131AP59861 70 aa15.1■□□□□ 0.01
HPS3-206ENST00000486530 FHL3Q13643 280 aa15.1■□□□□ 0.01
HPS3-206ENST00000486530 RAX2Q96IS3 184 aa15.1■□□□□ 0.01
HPS3-206ENST00000486530 SNHG12Q9BXW3 62 aa15.1■□□□□ 0.01
HPS3-206ENST00000486530 ST20Q9HBF5 79 aa15.1■□□□□ 0.01
HPS3-206ENST00000486530 A8MTW9 85 aa15.1■□□□□ 0.01
HPS3-206ENST00000486530 HLA-DRB4P13762 266 aa15.1■□□□□ 0.01
HPS3-206ENST00000486530 HILS1P60008 231 aa15.1■□□□□ 0.01
HPS3-206ENST00000486530 ZNF418Q8TF45 676 aaPredicted RBP15.1■□□□□ 0.01
HPS3-206ENST00000486530 IFI27L1Q96BM0 104 aa15.1■□□□□ 0.01
HPS3-206ENST00000486530 HLA-DRB4X5D2U9 266 aa15.1■□□□□ 0.01
HPS3-206ENST00000486530 DEFB114Q30KQ6 69 aa15.09■□□□□ 0.01
HPS3-206ENST00000486530 MCRIP2Q9BUT9 160 aaKnown RBP15.09■□□□□ 0.01
HPS3-206ENST00000486530 BAHCC1Q9P281 2608 aa15.09■□□□□ 0.01
HPS3-206ENST00000486530 IGHV1OR15-1A0A075B7D0 117 aa15.08■□□□□ 0.01
HPS3-206ENST00000486530 CD28P10747 220 aa15.08■□□□□ 0.01
HPS3-206ENST00000486530 LGALS9BQ3B8N2 356 aa15.08■□□□□ 0.01
HPS3-206ENST00000486530 LGALS9CQ6DKI2 356 aa15.08■□□□□ 0.01
HPS3-206ENST00000486530 POM121L12Q8N7R1 296 aa15.08■□□□□ 0.01
HPS3-206ENST00000486530 LINC01006Q8NI28 216 aa15.08■□□□□ 0.01
HPS3-206ENST00000486530 C9orf85Q96MD7 179 aa15.08■□□□□ 0.01
HPS3-206ENST00000486530 IGHV3-16A0A0C4DH30 117 aa15.08■□□□□ 0
HPS3-206ENST00000486530 MGPP08493 103 aa15.08■□□□□ 0
HPS3-206ENST00000486530 HIST2H2BDQ6DRA6 164 aa15.08■□□□□ 0
HPS3-206ENST00000486530 Q6ZN92 141 aa15.08■□□□□ 0
HPS3-206ENST00000486530 KNCNA6PVL3 124 aa15.07■□□□□ 0
HPS3-206ENST00000486530 SMIM17P0DL12 118 aa15.07■□□□□ 0
HPS3-206ENST00000486530 RASL10AQ92737 203 aa15.07■□□□□ 0
HPS3-206ENST00000486530 C20orf78Q9BR46 151 aa15.07■□□□□ 0
HPS3-206ENST00000486530 SMIM2Q9BVW6 85 aa15.07■□□□□ 0
HPS3-206ENST00000486530 TSSC4Q9Y5U2 329 aaPredicted RBP15.07■□□□□ 0
HPS3-206ENST00000486530 A0A1W2PRX2 142 aa15.06■□□□□ 0
HPS3-206ENST00000486530 hDV102S1A0JD36 115 aa15.06■□□□□ 0
HPS3-206ENST00000486530 CCL24O00175 119 aa15.06■□□□□ 0
HPS3-206ENST00000486530 PPP1R17O96001 155 aa15.06■□□□□ 0
HPS3-206ENST00000486530 HNRNPA3P51991 378 aaKnown RBP15.06■□□□□ 0
HPS3-206ENST00000486530 LAGE3Q14657 143 aa15.06■□□□□ 0
HPS3-206ENST00000486530 C11orf44Q8N8P7 122 aa15.06■□□□□ 0
HPS3-206ENST00000486530 SPAG8Q99932 426 aaPredicted RBP15.06■□□□□ 0
HPS3-206ENST00000486530 PMCHL2Q9BQD1 86 aa15.06■□□□□ 0
HPS3-206ENST00000486530 H3BMM0 161 aa15.06■□□□□ 0
HPS3-206ENST00000486530 FOSL1P15407 271 aa15.06■□□□□ 0
HPS3-206ENST00000486530 Q8N1Y9 231 aa15.06■□□□□ 0
HPS3-206ENST00000486530 TMEM158Q8WZ71 300 aa15.06■□□□□ 0
HPS3-206ENST00000486530 MAP6D1Q9H9H5 199 aa15.06■□□□□ 0
HPS3-206ENST00000486530 KIF25-AS1Q9Y6Z4 181 aa15.06■□□□□ 0
HPS3-206ENST00000486530 MTORP42345 2549 aa15.05■□□□□ 0
HPS3-206ENST00000486530 SORL1Q92673 2214 aa15.05■□□□□ 0
HPS3-206ENST00000486530 HIVEP2P31629 2446 aa15.05■□□□□ 0
HPS3-206ENST00000486530 TRAV25A0A0B4J276 109 aa15.05■□□□□ -0
HPS3-206ENST00000486530 SUMO2P61956 95 aaKnown RBP15.05■□□□□ -0
HPS3-206ENST00000486530 CD300EQ496F6 205 aaPredicted RBP15.05■□□□□ -0
HPS3-206ENST00000486530 SYT8Q8NBV8 401 aa15.05■□□□□ -0
HPS3-206ENST00000486530 CITED2Q99967 270 aaPredicted RBP15.05■□□□□ -0
HPS3-206ENST00000486530 GOLT1BQ9Y3E0 138 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms