RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 TNP2Q05952 138 aa8.86□□□□□ -0.99
CHMP3-208ENST00000486404 ZNF506Q5JVG8 444 aa8.86□□□□□ -0.99
CHMP3-208ENST00000486404 SH2D6Q7Z4S9 175 aa8.86□□□□□ -0.99
CHMP3-208ENST00000486404 ZC2HC1AQ96GY0 325 aa8.86□□□□□ -0.99
CHMP3-208ENST00000486404 ZFP30Q9Y2G7 519 aa8.86□□□□□ -0.99
CHMP3-208ENST00000486404 IGHV3-73A0A0B4J1V6 119 aa8.85□□□□□ -0.99
CHMP3-208ENST00000486404 H3BVH4 76 aa8.85□□□□□ -0.99
CHMP3-208ENST00000486404 M0R036 132 aa8.85□□□□□ -0.99
CHMP3-208ENST00000486404 CIDEAO60543 219 aa8.85□□□□□ -0.99
CHMP3-208ENST00000486404 SH2D1AO60880 128 aa8.85□□□□□ -0.99
CHMP3-208ENST00000486404 H2AFB1P0C5Y9 115 aa8.85□□□□□ -0.99
CHMP3-208ENST00000486404 RHOHQ15669 191 aa8.85□□□□□ -0.99
CHMP3-208ENST00000486404 CFAP126Q5VTH2 177 aa8.85□□□□□ -0.99
CHMP3-208ENST00000486404 EIF5AL1Q6IS14 154 aaKnown RBP8.85□□□□□ -0.99
CHMP3-208ENST00000486404 LYPD5Q6UWN5 251 aa8.85□□□□□ -0.99
CHMP3-208ENST00000486404 PRADC1Q9BSG0 188 aa8.85□□□□□ -0.99
CHMP3-208ENST00000486404 FAT2Q9NYQ8 4349 aa8.85□□□□□ -0.99
CHMP3-208ENST00000486404 IGKV3D-20A0A0C4DH25 116 aa8.84□□□□□ -0.99
CHMP3-208ENST00000486404 RS1O15537 224 aa8.84□□□□□ -0.99
CHMP3-208ENST00000486404 LTAP01374 205 aa8.84□□□□□ -0.99
CHMP3-208ENST00000486404 RNASE3P12724 160 aaKnown RBP8.84□□□□□ -0.99
CHMP3-208ENST00000486404 BTF3P20290 206 aaKnown RBP8.84□□□□□ -0.99
CHMP3-208ENST00000486404 LGALSLQ3ZCW2 172 aaPredicted RBP8.84□□□□□ -0.99
CHMP3-208ENST00000486404 SYT8Q8NBV8 401 aa8.84□□□□□ -0.99
CHMP3-208ENST00000486404 MBD3L1Q8WWY6 194 aa8.84□□□□□ -0.99
CHMP3-208ENST00000486404 LY96Q9Y6Y9 160 aa8.84□□□□□ -0.99
CHMP3-208ENST00000486404 DNAH17Q9UFH2 4485 aa8.84□□□□□ -0.99
CHMP3-208ENST00000486404 TRAV9-2A0A087WT02 112 aa8.83□□□□□ -1
CHMP3-208ENST00000486404 TRBV6-1A0A0K0K1D8 114 aa8.83□□□□□ -1
CHMP3-208ENST00000486404 LOC100131303A0A0U1RQF7 123 aa8.83□□□□□ -1
CHMP3-208ENST00000486404 SCO2A0A1W2PP80 73 aa8.83□□□□□ -1
CHMP3-208ENST00000486404 PGPEP1LA6NFU8 196 aa8.83□□□□□ -1
CHMP3-208ENST00000486404 A8MWV9 139 aa8.83□□□□□ -1
CHMP3-208ENST00000486404 TEX46H3BTG2 121 aa8.83□□□□□ -1
CHMP3-208ENST00000486404 S100A9P06702 114 aaKnown RBP8.83□□□□□ -1
CHMP3-208ENST00000486404 LINC00315P59091 139 aa8.83□□□□□ -1
CHMP3-208ENST00000486404 TCTE3Q8IZS6 198 aa8.83□□□□□ -1
CHMP3-208ENST00000486404 PTH2Q96A98 100 aa8.83□□□□□ -1
CHMP3-208ENST00000486404 MANBALQ9NQG1 85 aa8.83□□□□□ -1
CHMP3-208ENST00000486404 PKHD1P08F94 4074 aa8.82□□□□□ -1
CHMP3-208ENST00000486404 TMSB15BA0A087X1C1 80 aa8.82□□□□□ -1
CHMP3-208ENST00000486404 TRBV6-4A0A1B0GX49 114 aa8.82□□□□□ -1
CHMP3-208ENST00000486404 C16orf90A8MZG2 172 aa8.82□□□□□ -1
CHMP3-208ENST00000486404 MGST1P10620 155 aaKnown RBP8.82□□□□□ -1
CHMP3-208ENST00000486404 EVI2AP22794 236 aa8.82□□□□□ -1
CHMP3-208ENST00000486404 ZNF575Q86XF7 245 aa8.82□□□□□ -1
CHMP3-208ENST00000486404 WFDC10BQ8IUB3 73 aa8.82□□□□□ -1
CHMP3-208ENST00000486404 SLC25A29Q8N8R3 303 aa8.82□□□□□ -1
CHMP3-208ENST00000486404 IL36BQ9NZH7 164 aa8.82□□□□□ -1
CHMP3-208ENST00000486404 GRIFINA4D1Z8 144 aa8.81□□□□□ -1
CHMP3-208ENST00000486404 KRBOX1C9JBD0 128 aa8.81□□□□□ -1
CHMP3-208ENST00000486404 MED14OSP0DP75 135 aa8.81□□□□□ -1
CHMP3-208ENST00000486404 RAB5CP51148 216 aa8.81□□□□□ -1
CHMP3-208ENST00000486404 COX8CQ7Z4L0 72 aa8.81□□□□□ -1
CHMP3-208ENST00000486404 PARLQ9H300 379 aa8.81□□□□□ -1
CHMP3-208ENST00000486404 GNG13Q9P2W3 67 aa8.81□□□□□ -1
CHMP3-208ENST00000486404 PHLDA3Q9Y5J5 127 aa8.81□□□□□ -1
CHMP3-208ENST00000486404 TRAV8-6A0A0B4J262 113 aa8.8□□□□□ -1
CHMP3-208ENST00000486404 RHODO00212 210 aa8.8□□□□□ -1
CHMP3-208ENST00000486404 ARMS2P0C7Q2 107 aa8.8□□□□□ -1
CHMP3-208ENST00000486404 ZNF674Q2M3X9 581 aa8.8□□□□□ -1
CHMP3-208ENST00000486404 OR10J3Q5JRS4 329 aa8.8□□□□□ -1
CHMP3-208ENST00000486404 PIK3CD-AS1Q5SR53 167 aa8.8□□□□□ -1
CHMP3-208ENST00000486404 FAM74A4Q5TZK3 123 aa8.8□□□□□ -1
CHMP3-208ENST00000486404 ZFP2Q6ZN57 461 aa8.8□□□□□ -1
CHMP3-208ENST00000486404 AKAP14Q86UN6 197 aa8.8□□□□□ -1
CHMP3-208ENST00000486404 NFE4Q86UQ8 179 aa8.8□□□□□ -1
CHMP3-208ENST00000486404 C10orf126Q8N4M7 172 aa8.8□□□□□ -1
CHMP3-208ENST00000486404 hCG_2014768A0A024R1R8 64 aa8.79□□□□□ -1
CHMP3-208ENST00000486404 K7EP13 123 aa8.79□□□□□ -1
CHMP3-208ENST00000486404 M0R381 172 aa8.79□□□□□ -1
CHMP3-208ENST00000486404 IFNA1P01562 189 aa8.79□□□□□ -1
CHMP3-208ENST00000486404 C1QBP02746 253 aa8.79□□□□□ -1
CHMP3-208ENST00000486404 CRIP1P50238 77 aa8.79□□□□□ -1
CHMP3-208ENST00000486404 TIRAPP58753 221 aa8.79□□□□□ -1
CHMP3-208ENST00000486404 PRR27Q6MZM9 219 aa8.79□□□□□ -1
CHMP3-208ENST00000486404 BAGE2Q86Y30 109 aa8.79□□□□□ -1
CHMP3-208ENST00000486404 ZFP82Q8N141 532 aa8.79□□□□□ -1
CHMP3-208ENST00000486404 PKD1P98161 4303 aa8.78□□□□□ -1
CHMP3-208ENST00000486404 EREGO14944 169 aa8.78□□□□□ -1
CHMP3-208ENST00000486404 CRYGDP07320 174 aa8.78□□□□□ -1
CHMP3-208ENST00000486404 DNAH10OSP0CZ25 163 aa8.78□□□□□ -1
CHMP3-208ENST00000486404 ERVFC1-1P60608 527 aa8.78□□□□□ -1
CHMP3-208ENST00000486404 DNLZQ5SXM8 178 aa8.78□□□□□ -1
CHMP3-208ENST00000486404 SPATA12Q7Z6I5 190 aa8.78□□□□□ -1
CHMP3-208ENST00000486404 SLC51BQ86UW2 128 aa8.78□□□□□ -1
CHMP3-208ENST00000486404 MSRB1Q9NZV6 116 aa8.78□□□□□ -1
CHMP3-208ENST00000486404 TRAV1-1A0A0B4J248 108 aa8.77□□□□□ -1.01
CHMP3-208ENST00000486404 GAGE12JA6NER3 117 aa8.77□□□□□ -1.01
CHMP3-208ENST00000486404 RPL35P42766 123 aaKnown RBP8.77□□□□□ -1.01
CHMP3-208ENST00000486404 SULT1A2P50226 295 aa8.77□□□□□ -1.01
CHMP3-208ENST00000486404 GAGE1Q13065 139 aa8.77□□□□□ -1.01
CHMP3-208ENST00000486404 GAGE4Q13068 117 aa8.77□□□□□ -1.01
CHMP3-208ENST00000486404 GAGE5Q13069 117 aa8.77□□□□□ -1.01
CHMP3-208ENST00000486404 GAGE13Q4V321 117 aa8.77□□□□□ -1.01
CHMP3-208ENST00000486404 Q6ZNX1 250 aa8.77□□□□□ -1.01
CHMP3-208ENST00000486404 ATP6V0E2Q8NHE4 81 aa8.77□□□□□ -1.01
CHMP3-208ENST00000486404 KIAA1109Q2LD37 5005 aa8.77□□□□□ -1.01
CHMP3-208ENST00000486404 IGHV3-38A0A0C4DH36 116 aa8.76□□□□□ -1.01
CHMP3-208ENST00000486404 LELP1Q5T871 98 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms