RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 ZFP30Q9Y2G7 519 aa7.59□□□□□ -1.19
SNX21-211ENST00000486336 IGKV3D-20A0A0C4DH25 116 aa7.58□□□□□ -1.2
SNX21-211ENST00000486336 GRIFINA4D1Z8 144 aa7.58□□□□□ -1.2
SNX21-211ENST00000486336 B4DEV8 164 aa7.58□□□□□ -1.2
SNX21-211ENST00000486336 M0R036 132 aa7.58□□□□□ -1.2
SNX21-211ENST00000486336 RS1O15537 224 aa7.58□□□□□ -1.2
SNX21-211ENST00000486336 GATA1P15976 413 aaPredicted RBP7.58□□□□□ -1.2
SNX21-211ENST00000486336 SULT1A2P50226 295 aa7.58□□□□□ -1.2
SNX21-211ENST00000486336 ZNF506Q5JVG8 444 aa7.58□□□□□ -1.2
SNX21-211ENST00000486336 CFAP126Q5VTH2 177 aa7.58□□□□□ -1.2
SNX21-211ENST00000486336 ZC2HC1AQ96GY0 325 aa7.58□□□□□ -1.2
SNX21-211ENST00000486336 TXNDC17Q9BRA2 123 aa7.58□□□□□ -1.2
SNX21-211ENST00000486336 KRTAP1-5Q9BYS1 174 aa7.58□□□□□ -1.2
SNX21-211ENST00000486336 FAT2Q9NYQ8 4349 aa7.57□□□□□ -1.2
SNX21-211ENST00000486336 TMSB15BA0A087X1C1 80 aa7.57□□□□□ -1.2
SNX21-211ENST00000486336 A0A1W2PPQ1 181 aa7.57□□□□□ -1.2
SNX21-211ENST00000486336 SH2D1AO60880 128 aa7.57□□□□□ -1.2
SNX21-211ENST00000486336 RNASE3P12724 160 aaKnown RBP7.57□□□□□ -1.2
SNX21-211ENST00000486336 TAGLN2P37802 199 aaKnown RBP7.57□□□□□ -1.2
SNX21-211ENST00000486336 CRIP1P50238 77 aa7.57□□□□□ -1.2
SNX21-211ENST00000486336 FAM162BQ5T6X4 162 aa7.57□□□□□ -1.2
SNX21-211ENST00000486336 TCEAL7Q9BRU2 100 aa7.57□□□□□ -1.2
SNX21-211ENST00000486336 PRADC1Q9BSG0 188 aa7.57□□□□□ -1.2
SNX21-211ENST00000486336 SCO2A0A1W2PP80 73 aa7.56□□□□□ -1.2
SNX21-211ENST00000486336 H3BVH4 76 aa7.56□□□□□ -1.2
SNX21-211ENST00000486336 NKX2-5P52952 324 aaPredicted RBP7.56□□□□□ -1.2
SNX21-211ENST00000486336 HECTD4Q9Y4D8 3996 aa7.56□□□□□ -1.2
SNX21-211ENST00000486336 TRAV1-1A0A0B4J248 108 aa7.55□□□□□ -1.2
SNX21-211ENST00000486336 TRBV6-1A0A0K0K1D8 114 aa7.55□□□□□ -1.2
SNX21-211ENST00000486336 KRBOX1C9JBD0 128 aa7.55□□□□□ -1.2
SNX21-211ENST00000486336 CIDEAO60543 219 aa7.55□□□□□ -1.2
SNX21-211ENST00000486336 LTAP01374 205 aa7.55□□□□□ -1.2
SNX21-211ENST00000486336 S100A9P06702 114 aaKnown RBP7.55□□□□□ -1.2
SNX21-211ENST00000486336 ARMS2P0C7Q2 107 aa7.55□□□□□ -1.2
SNX21-211ENST00000486336 RAB14P61106 215 aa7.55□□□□□ -1.2
SNX21-211ENST00000486336 CCL20P78556 96 aa7.55□□□□□ -1.2
SNX21-211ENST00000486336 SH2D6Q7Z4S9 175 aa7.55□□□□□ -1.2
SNX21-211ENST00000486336 BAGE2Q86Y30 109 aa7.55□□□□□ -1.2
SNX21-211ENST00000486336 SLC25A29Q8N8R3 303 aa7.55□□□□□ -1.2
SNX21-211ENST00000486336 PTH2Q96A98 100 aa7.55□□□□□ -1.2
SNX21-211ENST00000486336 GNG13Q9P2W3 67 aa7.55□□□□□ -1.2
SNX21-211ENST00000486336 TRAV9-2A0A087WT02 112 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 A8MWV9 139 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 IFNA1P01562 189 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 LINC00315P59091 139 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 RHOHQ15669 191 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 ZNF674Q2M3X9 581 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 DMRTA1Q5VZB9 504 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 TEX261Q6UWH6 196 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 COX8CQ7Z4L0 72 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 ZNF575Q86XF7 245 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 WFDC10BQ8IUB3 73 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 SYT8Q8NBV8 401 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 JPT2Q9H910 190 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 IL36BQ9NZH7 164 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 PHLDA3Q9Y5J5 127 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 TNFRSF18Q9Y5U5 241 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 LY96Q9Y6Y9 160 aa7.54□□□□□ -1.2
SNX21-211ENST00000486336 TRBV6-4A0A1B0GX49 114 aa7.53□□□□□ -1.2
SNX21-211ENST00000486336 EVI2AP22794 236 aa7.53□□□□□ -1.2
SNX21-211ENST00000486336 PRR27Q6MZM9 219 aa7.53□□□□□ -1.2
SNX21-211ENST00000486336 PARLQ9H300 379 aa7.53□□□□□ -1.2
SNX21-211ENST00000486336 MANBALQ9NQG1 85 aa7.53□□□□□ -1.2
SNX21-211ENST00000486336 GAGE12JA6NER3 117 aa7.52□□□□□ -1.21
SNX21-211ENST00000486336 C16orf90A8MZG2 172 aa7.52□□□□□ -1.21
SNX21-211ENST00000486336 M0R381 172 aa7.52□□□□□ -1.21
SNX21-211ENST00000486336 MGST1P10620 155 aaKnown RBP7.52□□□□□ -1.21
SNX21-211ENST00000486336 GAGE1Q13065 139 aa7.52□□□□□ -1.21
SNX21-211ENST00000486336 GAGE4Q13068 117 aa7.52□□□□□ -1.21
SNX21-211ENST00000486336 GAGE5Q13069 117 aa7.52□□□□□ -1.21
SNX21-211ENST00000486336 LINC01559Q495D7 138 aa7.52□□□□□ -1.21
SNX21-211ENST00000486336 GAGE13Q4V321 117 aa7.52□□□□□ -1.21
SNX21-211ENST00000486336 OR10J3Q5JRS4 329 aa7.52□□□□□ -1.21
SNX21-211ENST00000486336 FAM74A4Q5TZK3 123 aa7.52□□□□□ -1.21
SNX21-211ENST00000486336 ALKAL2Q6UX46 152 aa7.52□□□□□ -1.21
SNX21-211ENST00000486336 Q6ZSN1 163 aa7.52□□□□□ -1.21
SNX21-211ENST00000486336 ATP6V0E2Q8NHE4 81 aa7.52□□□□□ -1.21
SNX21-211ENST00000486336 SAMD10Q9BYL1 202 aa7.52□□□□□ -1.21
SNX21-211ENST00000486336 BOLA1Q9Y3E2 137 aa7.52□□□□□ -1.21
SNX21-211ENST00000486336 PKD1P98161 4303 aa7.51□□□□□ -1.21
SNX21-211ENST00000486336 A0A087WWL8 130 aa7.51□□□□□ -1.21
SNX21-211ENST00000486336 TRAV8-6A0A0B4J262 113 aa7.51□□□□□ -1.21
SNX21-211ENST00000486336 BTF3P20290 206 aaKnown RBP7.51□□□□□ -1.21
SNX21-211ENST00000486336 RPL19P84098 196 aaKnown RBP7.51□□□□□ -1.21
SNX21-211ENST00000486336 DNLZQ5SXM8 178 aa7.51□□□□□ -1.21
SNX21-211ENST00000486336 ZFP2Q6ZN57 461 aa7.51□□□□□ -1.21
SNX21-211ENST00000486336 SPATA12Q7Z6I5 190 aa7.51□□□□□ -1.21
SNX21-211ENST00000486336 CRYGDP07320 174 aa7.5□□□□□ -1.21
SNX21-211ENST00000486336 MED14OSP0DP75 135 aa7.5□□□□□ -1.21
SNX21-211ENST00000486336 RPL35P42766 123 aaKnown RBP7.5□□□□□ -1.21
SNX21-211ENST00000486336 SSTP61278 116 aa7.5□□□□□ -1.21
SNX21-211ENST00000486336 PIK3CD-AS1Q5SR53 167 aa7.5□□□□□ -1.21
SNX21-211ENST00000486336 ZFP82Q8N141 532 aa7.5□□□□□ -1.21
SNX21-211ENST00000486336 C14orf178Q8N769 122 aaPredicted RBP7.5□□□□□ -1.21
SNX21-211ENST00000486336 IGHV3-38A0A0C4DH36 116 aa7.49□□□□□ -1.21
SNX21-211ENST00000486336 MUC21A0A0G2JKD1 596 aa7.49□□□□□ -1.21
SNX21-211ENST00000486336 MUC21A0A140T8X8 626 aa7.49□□□□□ -1.21
SNX21-211ENST00000486336 RHODO00212 210 aa7.49□□□□□ -1.21
SNX21-211ENST00000486336 NDUFS6O75380 124 aaKnown RBP7.49□□□□□ -1.21
SNX21-211ENST00000486336 IGHV3-30P01768 117 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms