RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 ZFP30Q9Y2G7 519 aa12.54□□□□□ -0.4
PRPF40A-209ENST00000486100 LY96Q9Y6Y9 160 aa12.54□□□□□ -0.4
PRPF40A-209ENST00000486100 A0A0D9SG52 128 aa12.53□□□□□ -0.4
PRPF40A-209ENST00000486100 K7EP13 123 aa12.53□□□□□ -0.4
PRPF40A-209ENST00000486100 ZNF506Q5JVG8 444 aa12.53□□□□□ -0.4
PRPF40A-209ENST00000486100 COX8CQ7Z4L0 72 aa12.53□□□□□ -0.4
PRPF40A-209ENST00000486100 SPATA12Q7Z6I5 190 aa12.53□□□□□ -0.4
PRPF40A-209ENST00000486100 TCEAL7Q9BRU2 100 aa12.53□□□□□ -0.4
PRPF40A-209ENST00000486100 TRBV6-4A0A1B0GX49 114 aa12.52□□□□□ -0.41
PRPF40A-209ENST00000486100 S100A4P26447 101 aaKnown RBP12.52□□□□□ -0.41
PRPF40A-209ENST00000486100 CRIP1P50238 77 aa12.52□□□□□ -0.41
PRPF40A-209ENST00000486100 TIRAPP58753 221 aa12.52□□□□□ -0.41
PRPF40A-209ENST00000486100 CST9LP1Q5W188 147 aa12.52□□□□□ -0.41
PRPF40A-209ENST00000486100 WFDC10BQ8IUB3 73 aa12.52□□□□□ -0.41
PRPF40A-209ENST00000486100 NHLRC2Q8NBF2 726 aa12.52□□□□□ -0.41
PRPF40A-209ENST00000486100 FMC1Q96HJ9 113 aa12.52□□□□□ -0.41
PRPF40A-209ENST00000486100 PRADC1Q9BSG0 188 aa12.52□□□□□ -0.41
PRPF40A-209ENST00000486100 LRP1BQ9NZR2 4599 aa12.52□□□□□ -0.41
PRPF40A-209ENST00000486100 PCLOQ9Y6V0 5065 aa12.51□□□□□ -0.41
PRPF40A-209ENST00000486100 IGHV3-73A0A0B4J1V6 119 aa12.51□□□□□ -0.41
PRPF40A-209ENST00000486100 UMAD1C9J7I0 102 aa12.51□□□□□ -0.41
PRPF40A-209ENST00000486100 EVI2AP22794 236 aa12.51□□□□□ -0.41
PRPF40A-209ENST00000486100 ASIPP42127 132 aa12.51□□□□□ -0.41
PRPF40A-209ENST00000486100 RHOHQ15669 191 aa12.51□□□□□ -0.41
PRPF40A-209ENST00000486100 PIK3CD-AS1Q5SR53 167 aa12.51□□□□□ -0.41
PRPF40A-209ENST00000486100 NFE4Q86UQ8 179 aa12.51□□□□□ -0.41
PRPF40A-209ENST00000486100 MBD3L1Q8WWY6 194 aa12.51□□□□□ -0.41
PRPF40A-209ENST00000486100 TNFRSF18Q9Y5U5 241 aa12.51□□□□□ -0.41
PRPF40A-209ENST00000486100 TRBV6-1A0A0K0K1D8 114 aa12.5□□□□□ -0.41
PRPF40A-209ENST00000486100 KANTRA0A1W2PQU2 76 aa12.5□□□□□ -0.41
PRPF40A-209ENST00000486100 B4DEV8 164 aa12.5□□□□□ -0.41
PRPF40A-209ENST00000486100 BCL2L11O43521 198 aa12.5□□□□□ -0.41
PRPF40A-209ENST00000486100 DNAH10OSP0CZ25 163 aa12.5□□□□□ -0.41
PRPF40A-209ENST00000486100 UBE2G1P62253 170 aa12.5□□□□□ -0.41
PRPF40A-209ENST00000486100 SFT2D1Q8WV19 159 aa12.5□□□□□ -0.41
PRPF40A-209ENST00000486100 ZC2HC1AQ96GY0 325 aa12.5□□□□□ -0.41
PRPF40A-209ENST00000486100 ZNF471Q9BX82 626 aaPredicted RBP12.5□□□□□ -0.41
PRPF40A-209ENST00000486100 PAGE4O60829 102 aa12.49□□□□□ -0.41
PRPF40A-209ENST00000486100 MGST1P10620 155 aaKnown RBP12.49□□□□□ -0.41
PRPF40A-209ENST00000486100 KRTAP10-2P60368 255 aa12.49□□□□□ -0.41
PRPF40A-209ENST00000486100 DNLZQ5SXM8 178 aa12.49□□□□□ -0.41
PRPF40A-209ENST00000486100 FAM213BQ8TBF2 198 aa12.49□□□□□ -0.41
PRPF40A-209ENST00000486100 IL36BQ9NZH7 164 aa12.49□□□□□ -0.41
PRPF40A-209ENST00000486100 A8MWV9 139 aa12.48□□□□□ -0.41
PRPF40A-209ENST00000486100 KRBOX1C9JBD0 128 aa12.48□□□□□ -0.41
PRPF40A-209ENST00000486100 SH2D1AO60880 128 aa12.48□□□□□ -0.41
PRPF40A-209ENST00000486100 CDK2AP2O75956 126 aa12.48□□□□□ -0.41
PRPF40A-209ENST00000486100 LTAP01374 205 aa12.48□□□□□ -0.41
PRPF40A-209ENST00000486100 EIF5AP63241 154 aaKnown RBP12.48□□□□□ -0.41
PRPF40A-209ENST00000486100 LGALSLQ3ZCW2 172 aaPredicted RBP12.48□□□□□ -0.41
PRPF40A-209ENST00000486100 FAM162BQ5T6X4 162 aa12.48□□□□□ -0.41
PRPF40A-209ENST00000486100 ZFP2Q6ZN57 461 aa12.48□□□□□ -0.41
PRPF40A-209ENST00000486100 AKR1C3P42330 323 aa12.47□□□□□ -0.41
PRPF40A-209ENST00000486100 ZNF674Q2M3X9 581 aa12.47□□□□□ -0.41
PRPF40A-209ENST00000486100 PARLQ9H300 379 aa12.47□□□□□ -0.41
PRPF40A-209ENST00000486100 MSRB1Q9NZV6 116 aa12.47□□□□□ -0.41
PRPF40A-209ENST00000486100 IGHV3-38A0A0C4DH36 116 aa12.46□□□□□ -0.41
PRPF40A-209ENST00000486100 M0R036 132 aa12.46□□□□□ -0.41
PRPF40A-209ENST00000486100 CRYGDP07320 174 aa12.46□□□□□ -0.41
PRPF40A-209ENST00000486100 ARMS2P0C7Q2 107 aa12.46□□□□□ -0.41
PRPF40A-209ENST00000486100 TMUB2Q71RG4 321 aa12.46□□□□□ -0.41
PRPF40A-209ENST00000486100 C10orf126Q8N4M7 172 aa12.46□□□□□ -0.41
PRPF40A-209ENST00000486100 BOLA1Q9Y3E2 137 aa12.46□□□□□ -0.41
PRPF40A-209ENST00000486100 TRAV8-6A0A0B4J262 113 aa12.45□□□□□ -0.42
PRPF40A-209ENST00000486100 GRIFINA4D1Z8 144 aa12.45□□□□□ -0.42
PRPF40A-209ENST00000486100 H3BVH4 76 aa12.45□□□□□ -0.42
PRPF40A-209ENST00000486100 EREGO14944 169 aa12.45□□□□□ -0.42
PRPF40A-209ENST00000486100 S100A9P06702 114 aaKnown RBP12.45□□□□□ -0.42
PRPF40A-209ENST00000486100 H2AFB1P0C5Y9 115 aa12.45□□□□□ -0.42
PRPF40A-209ENST00000486100 DMRTA1Q5VZB9 504 aa12.45□□□□□ -0.42
PRPF40A-209ENST00000486100 Q6ZSN1 163 aa12.45□□□□□ -0.42
PRPF40A-209ENST00000486100 ATP6V0E2Q8NHE4 81 aa12.45□□□□□ -0.42
PRPF40A-209ENST00000486100 DNAH5Q8TE73 4624 aa12.45□□□□□ -0.42
PRPF40A-209ENST00000486100 A0A1B0GV50 99 aa12.44□□□□□ -0.42
PRPF40A-209ENST00000486100 TPT1P13693 172 aaKnown RBP12.44□□□□□ -0.42
PRPF40A-209ENST00000486100 ERVFC1-1P60608 527 aa12.44□□□□□ -0.42
PRPF40A-209ENST00000486100 LINC01559Q495D7 138 aa12.44□□□□□ -0.42
PRPF40A-209ENST00000486100 UFSP1Q6NVU6 142 aa12.44□□□□□ -0.42
PRPF40A-209ENST00000486100 SYT8Q8NBV8 401 aa12.44□□□□□ -0.42
PRPF40A-209ENST00000486100 GTSF1LQ9H1H1 148 aa12.44□□□□□ -0.42
PRPF40A-209ENST00000486100 JPT2Q9H910 190 aa12.44□□□□□ -0.42
PRPF40A-209ENST00000486100 PGPEP1Q9NXJ5 209 aa12.44□□□□□ -0.42
PRPF40A-209ENST00000486100 LINC01556Q5JQF7 62 aa12.43□□□□□ -0.42
PRPF40A-209ENST00000486100 OR10J3Q5JRS4 329 aa12.43□□□□□ -0.42
PRPF40A-209ENST00000486100 LELP1Q5T871 98 aa12.43□□□□□ -0.42
PRPF40A-209ENST00000486100 C9orf62Q8N4C0 152 aa12.43□□□□□ -0.42
PRPF40A-209ENST00000486100 SAMD10Q9BYL1 202 aa12.43□□□□□ -0.42
PRPF40A-209ENST00000486100 SCRT2Q9NQ03 307 aa12.43□□□□□ -0.42
PRPF40A-209ENST00000486100 HSPG2P98160 4391 aa12.43□□□□□ -0.42
PRPF40A-209ENST00000486100 PHLDA3Q9Y5J5 127 aa12.42□□□□□ -0.42
PRPF40A-209ENST00000486100 TMSB15BA0A087X1C1 80 aa12.41□□□□□ -0.42
PRPF40A-209ENST00000486100 SCO2A0A1W2PP80 73 aa12.41□□□□□ -0.42
PRPF40A-209ENST00000486100 GAGE12JA6NER3 117 aa12.41□□□□□ -0.42
PRPF40A-209ENST00000486100 GAGE1Q13065 139 aa12.41□□□□□ -0.42
PRPF40A-209ENST00000486100 GAGE4Q13068 117 aa12.41□□□□□ -0.42
PRPF40A-209ENST00000486100 GAGE5Q13069 117 aa12.41□□□□□ -0.42
PRPF40A-209ENST00000486100 GAGE13Q4V321 117 aa12.41□□□□□ -0.42
PRPF40A-209ENST00000486100 A0A087WTM6 91 aa12.4□□□□□ -0.42
PRPF40A-209ENST00000486100 IBA57-AS1B1ANH7 110 aa12.4□□□□□ -0.42
PRPF40A-209ENST00000486100 RHODO00212 210 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms