RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 KIAA1644Q3SXP7 199 aa10.49□□□□□ -0.73
COL9A1-207ENST00000486080 CSNK1G2-AS1Q8NCQ2 148 aa10.49□□□□□ -0.73
COL9A1-207ENST00000486080 CSTL1Q9H114 145 aa10.49□□□□□ -0.73
COL9A1-207ENST00000486080 PHLDA3Q9Y5J5 127 aa10.49□□□□□ -0.73
COL9A1-207ENST00000486080 NOTCH1P46531 2555 aa10.48□□□□□ -0.73
COL9A1-207ENST00000486080 A0A1B0GW15 77 aa10.48□□□□□ -0.73
COL9A1-207ENST00000486080 M0R381 172 aa10.48□□□□□ -0.73
COL9A1-207ENST00000486080 APCSP02743 223 aa10.48□□□□□ -0.73
COL9A1-207ENST00000486080 MT-ND6P03923 174 aa10.48□□□□□ -0.73
COL9A1-207ENST00000486080 MED14OSP0DP75 135 aa10.48□□□□□ -0.73
COL9A1-207ENST00000486080 RAB5BP61020 215 aa10.48□□□□□ -0.73
COL9A1-207ENST00000486080 SPANXN1Q5VSR9 72 aa10.48□□□□□ -0.73
COL9A1-207ENST00000486080 C9orf85Q96MD7 179 aa10.48□□□□□ -0.73
COL9A1-207ENST00000486080 TRGV11A0A075B6L2 103 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 LOC102724200A0A096LPH7 203 aaPredicted RBP10.47□□□□□ -0.73
COL9A1-207ENST00000486080 HIST1H2BKO60814 126 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 HIST1H2BJP06899 126 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 TRGC1P0CF51 173 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 AZU1P20160 251 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 HIST1H2BOP23527 126 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 HIST1H2BBP33778 126 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 HIST1H2BDP58876 126 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 HIST1H2BCP62807 126 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 HIST2H2BEQ16778 126 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.47□□□□□ -0.73
COL9A1-207ENST00000486080 SAMD5Q5TGI4 173 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 HIST1H2BHQ93079 126 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 HIST1H2BNQ99877 126 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 HIST1H2BMQ99879 126 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 LINC00467Q9BRT7 94 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 C1QTNF4Q9BXJ3 329 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 IGHV4-4A0A075B6R2 117 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 CACNG7P62955 275 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 DMRTA1Q5VZB9 504 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 TMEM256Q8N2U0 113 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 GATD1Q8NB37 220 aa10.47□□□□□ -0.73
COL9A1-207ENST00000486080 NBEAL2Q6ZNJ1 2754 aa10.46□□□□□ -0.73
COL9A1-207ENST00000486080 NBEAL1Q6ZS30 2694 aa10.46□□□□□ -0.74
COL9A1-207ENST00000486080 S100A8P05109 93 aa10.46□□□□□ -0.74
COL9A1-207ENST00000486080 IGHV4-30-4P0DP06 118 aa10.46□□□□□ -0.74
COL9A1-207ENST00000486080 ZNF493Q6ZR52 646 aa10.46□□□□□ -0.74
COL9A1-207ENST00000486080 DNAH3Q8TD57 4116 aa10.46□□□□□ -0.74
COL9A1-207ENST00000486080 C11orf72Q8NBR9 251 aa10.45□□□□□ -0.74
COL9A1-207ENST00000486080 GSN-AS1Q9NRJ2 163 aa10.45□□□□□ -0.74
COL9A1-207ENST00000486080 GOLT1BQ9Y3E0 138 aa10.45□□□□□ -0.74
COL9A1-207ENST00000486080 NXPH4O95158 308 aa10.44□□□□□ -0.74
COL9A1-207ENST00000486080 EVI2AP22794 236 aa10.44□□□□□ -0.74
COL9A1-207ENST00000486080 AMN1Q8IY45 258 aa10.44□□□□□ -0.74
COL9A1-207ENST00000486080 MGAM2Q2M2H8 2515 aa10.44□□□□□ -0.74
COL9A1-207ENST00000486080 ZNF705AQ6ZN79 300 aaPredicted RBP10.44□□□□□ -0.74
COL9A1-207ENST00000486080 TMEM191AQ9H0A3 160 aa10.44□□□□□ -0.74
COL9A1-207ENST00000486080 FAM104BQ5XKR9 115 aa10.43□□□□□ -0.74
COL9A1-207ENST00000486080 JPT2Q9H910 190 aa10.43□□□□□ -0.74
COL9A1-207ENST00000486080 KIR2DL5BA0A0G2JN68 375 aa10.42□□□□□ -0.74
COL9A1-207ENST00000486080 KIR2DL5BA0A0G2JPC4 375 aa10.42□□□□□ -0.74
COL9A1-207ENST00000486080 ZNF415Q09FC8 603 aa10.42□□□□□ -0.74
COL9A1-207ENST00000486080 KIR2DL5AQ8N109 375 aa10.42□□□□□ -0.74
COL9A1-207ENST00000486080 KIR2DL5BQ8NHK3 375 aa10.42□□□□□ -0.74
COL9A1-207ENST00000486080 RNF185Q96GF1 192 aa10.42□□□□□ -0.74
COL9A1-207ENST00000486080 ZMAT5Q9UDW3 170 aaKnown RBP10.42□□□□□ -0.74
COL9A1-207ENST00000486080 SRIP30626 198 aa10.42□□□□□ -0.74
COL9A1-207ENST00000486080 APOC4P55056 127 aa10.42□□□□□ -0.74
COL9A1-207ENST00000486080 ZNF876PQ49A33 203 aa10.42□□□□□ -0.74
COL9A1-207ENST00000486080 MRPL51Q4U2R6 128 aaKnown RBP10.42□□□□□ -0.74
COL9A1-207ENST00000486080 C14orf178Q8N769 122 aaPredicted RBP10.42□□□□□ -0.74
COL9A1-207ENST00000486080 RNASE8Q8TDE3 154 aaKnown RBP10.42□□□□□ -0.74
COL9A1-207ENST00000486080 RCHY1Q96PM5 261 aa10.42□□□□□ -0.74
COL9A1-207ENST00000486080 PRB2P02812 416 aaPredicted RBP10.41□□□□□ -0.74
COL9A1-207ENST00000486080 NDUFA6P56556 154 aa10.41□□□□□ -0.74
COL9A1-207ENST00000486080 DEFB135Q30KP9 77 aa10.41□□□□□ -0.74
COL9A1-207ENST00000486080 ALKBH7Q9BT30 221 aaPredicted RBP10.41□□□□□ -0.74
COL9A1-207ENST00000486080 RAB4AP20338 218 aa10.4□□□□□ -0.74
COL9A1-207ENST00000486080 SMIM15Q7Z3B0 74 aa10.4□□□□□ -0.74
COL9A1-207ENST00000486080 SYT8Q8NBV8 401 aa10.4□□□□□ -0.74
COL9A1-207ENST00000486080 TMEM263Q8WUH6 116 aaKnown RBP10.4□□□□□ -0.74
COL9A1-207ENST00000486080 SMKR1H3BMG3 65 aa10.4□□□□□ -0.75
COL9A1-207ENST00000486080 GAS8-AS1O95177 125 aa10.4□□□□□ -0.75
COL9A1-207ENST00000486080 AP1S3Q96PC3 154 aa10.4□□□□□ -0.75
COL9A1-207ENST00000486080 A0A087WWL8 130 aa10.39□□□□□ -0.75
COL9A1-207ENST00000486080 PLAC8L1A1L4L8 177 aa10.39□□□□□ -0.75
COL9A1-207ENST00000486080 M0R2P5 195 aa10.39□□□□□ -0.75
COL9A1-207ENST00000486080 RRN3P1Q2M238 152 aa10.39□□□□□ -0.75
COL9A1-207ENST00000486080 IL17DQ8TAD2 202 aa10.39□□□□□ -0.75
COL9A1-207ENST00000486080 SAMD10Q9BYL1 202 aa10.39□□□□□ -0.75
COL9A1-207ENST00000486080 MRPL16Q9NX20 251 aaKnown RBP10.39□□□□□ -0.75
COL9A1-207ENST00000486080 KIF25-AS1Q9Y6Z4 181 aa10.39□□□□□ -0.75
COL9A1-207ENST00000486080 X6R8D5 127 aa10.39□□□□□ -0.75
COL9A1-207ENST00000486080 NACAE9PAV3 2078 aa10.38□□□□□ -0.75
COL9A1-207ENST00000486080 D6R8Y8 96 aa10.38□□□□□ -0.75
COL9A1-207ENST00000486080 NCR2O95944 276 aa10.38□□□□□ -0.75
COL9A1-207ENST00000486080 S100A6P06703 90 aa10.38□□□□□ -0.75
COL9A1-207ENST00000486080 SNRPEP62304 92 aaKnown RBP10.38□□□□□ -0.75
COL9A1-207ENST00000486080 SPXQ9BT56 116 aa10.38□□□□□ -0.75
COL9A1-207ENST00000486080 TRAV26-2A0A0B4J265 109 aa10.37□□□□□ -0.75
COL9A1-207ENST00000486080 LINC00315P59091 139 aa10.37□□□□□ -0.75
COL9A1-207ENST00000486080 IQCJQ1A5X6 159 aa10.37□□□□□ -0.75
COL9A1-207ENST00000486080 C16orf74Q96GX8 76 aa10.37□□□□□ -0.75
COL9A1-207ENST00000486080 DPH3P1Q9H4G8 78 aa10.37□□□□□ -0.75
COL9A1-207ENST00000486080 U3KQK5 164 aa10.37□□□□□ -0.75
COL9A1-207ENST00000486080 A8MZ25 164 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms