RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ORM1P02763 201 aa4.82□□□□□ -1.64
VPS50-218ENST00000485994 TYMSP04818 313 aa4.82□□□□□ -1.64
VPS50-218ENST00000485994 ZNF80P51504 273 aaPredicted RBP4.82□□□□□ -1.64
VPS50-218ENST00000485994 GNG5P63218 68 aa4.82□□□□□ -1.64
VPS50-218ENST00000485994 DNLZQ5SXM8 178 aa4.82□□□□□ -1.64
VPS50-218ENST00000485994 LYPD5Q6UWN5 251 aa4.82□□□□□ -1.64
VPS50-218ENST00000485994 SH2D6Q7Z4S9 175 aa4.82□□□□□ -1.64
VPS50-218ENST00000485994 ZNF479Q96JC4 524 aa4.82□□□□□ -1.64
VPS50-218ENST00000485994 SDF2L1Q9HCN8 221 aa4.82□□□□□ -1.64
VPS50-218ENST00000485994 MRPL16Q9NX20 251 aaKnown RBP4.82□□□□□ -1.64
VPS50-218ENST00000485994 ZFP30Q9Y2G7 519 aa4.82□□□□□ -1.64
VPS50-218ENST00000485994 KIAA1109Q2LD37 5005 aa4.82□□□□□ -1.64
VPS50-218ENST00000485994 TRGV4A0A0C4DH28 118 aa4.81□□□□□ -1.64
VPS50-218ENST00000485994 BCL2L11O43521 198 aa4.81□□□□□ -1.64
VPS50-218ENST00000485994 GCGP01275 180 aa4.81□□□□□ -1.64
VPS50-218ENST00000485994 PPT1P50897 306 aa4.81□□□□□ -1.64
VPS50-218ENST00000485994 TIRAPP58753 221 aa4.81□□□□□ -1.64
VPS50-218ENST00000485994 EIF5AP63241 154 aaKnown RBP4.81□□□□□ -1.64
VPS50-218ENST00000485994 DPPA3Q6W0C5 159 aa4.81□□□□□ -1.64
VPS50-218ENST00000485994 NEGR1Q7Z3B1 354 aa4.81□□□□□ -1.64
VPS50-218ENST00000485994 C9orf62Q8N4C0 152 aa4.81□□□□□ -1.64
VPS50-218ENST00000485994 STOML3Q8TAV4 291 aa4.81□□□□□ -1.64
VPS50-218ENST00000485994 C9orf85Q96MD7 179 aa4.81□□□□□ -1.64
VPS50-218ENST00000485994 C11orf21Q9P2W6 132 aa4.81□□□□□ -1.64
VPS50-218ENST00000485994 RPH3ALQ9UNE2 315 aa4.81□□□□□ -1.64
VPS50-218ENST00000485994 K7EQD1 137 aa4.8□□□□□ -1.64
VPS50-218ENST00000485994 PEX7O00628 323 aa4.8□□□□□ -1.64
VPS50-218ENST00000485994 RS1O15537 224 aa4.8□□□□□ -1.64
VPS50-218ENST00000485994 IFNA7P01567 189 aa4.8□□□□□ -1.64
VPS50-218ENST00000485994 S100A9P06702 114 aaKnown RBP4.8□□□□□ -1.64
VPS50-218ENST00000485994 MED14OSP0DP75 135 aa4.8□□□□□ -1.64
VPS50-218ENST00000485994 RNASE3P12724 160 aaKnown RBP4.8□□□□□ -1.64
VPS50-218ENST00000485994 GATA1P15976 413 aaPredicted RBP4.8□□□□□ -1.64
VPS50-218ENST00000485994 ZNF876PQ49A33 203 aa4.8□□□□□ -1.64
VPS50-218ENST00000485994 ZFP69Q49AA0 526 aa4.8□□□□□ -1.64
VPS50-218ENST00000485994 PRNTQ86SH4 94 aa4.8□□□□□ -1.64
VPS50-218ENST00000485994 OR4C5Q8NGB2 326 aa4.8□□□□□ -1.64
VPS50-218ENST00000485994 FMC1Q96HJ9 113 aa4.8□□□□□ -1.64
VPS50-218ENST00000485994 SGK494Q96LW2 274 aa4.8□□□□□ -1.64
VPS50-218ENST00000485994 C8orf49Q96NF6 230 aa4.8□□□□□ -1.64
VPS50-218ENST00000485994 TXNDC17Q9BRA2 123 aa4.8□□□□□ -1.64
VPS50-218ENST00000485994 RYR1P21817 5038 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 IGKV3D-20A0A0C4DH25 116 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 TRBV6-4A0A1B0GX49 114 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 KANTRA0A1W2PQU2 76 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 MAP1LC3B2A6NCE7 125 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 PGPEP1LA6NFU8 196 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 C9JCJ5 164 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 SIVA1O15304 175 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 IGHV3-53P01767 116 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 SFTA3P0C7M3 94 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 CRIP1P50238 77 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 RAB5CP51148 216 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 NKX2-5P52952 324 aaPredicted RBP4.79□□□□□ -1.64
VPS50-218ENST00000485994 ZNF674Q2M3X9 581 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 CFAP126Q5VTH2 177 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 ZFP2Q6ZN57 461 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 ZNF575Q86XF7 245 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 LINC00479Q96M42 142 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 MAP1LC3BQ9GZQ8 125 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 IL36BQ9NZH7 164 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 LRP1BQ9NZR2 4599 aa4.79□□□□□ -1.64
VPS50-218ENST00000485994 TRAV9-2A0A087WT02 112 aa4.78□□□□□ -1.64
VPS50-218ENST00000485994 TRAV1-1A0A0B4J248 108 aa4.78□□□□□ -1.64
VPS50-218ENST00000485994 TRAV34A0A0B4J273 112 aa4.78□□□□□ -1.64
VPS50-218ENST00000485994 LTAP01374 205 aa4.78□□□□□ -1.64
VPS50-218ENST00000485994 GYPEP15421 78 aa4.78□□□□□ -1.64
VPS50-218ENST00000485994 SRIP30626 198 aa4.78□□□□□ -1.64
VPS50-218ENST00000485994 FGF8P55075 233 aaPredicted RBP4.78□□□□□ -1.64
VPS50-218ENST00000485994 KRTAP10-2P60368 255 aa4.78□□□□□ -1.64
VPS50-218ENST00000485994 UBE2G2P60604 165 aa4.78□□□□□ -1.64
VPS50-218ENST00000485994 SFT2D1Q8WV19 159 aa4.78□□□□□ -1.64
VPS50-218ENST00000485994 ZNF471Q9BX82 626 aaPredicted RBP4.78□□□□□ -1.64
VPS50-218ENST00000485994 KRTAP1-5Q9BYS1 174 aa4.78□□□□□ -1.64
VPS50-218ENST00000485994 NAGKQ9UJ70 344 aa4.78□□□□□ -1.64
VPS50-218ENST00000485994 A8MWV9 139 aa4.77□□□□□ -1.65
VPS50-218ENST00000485994 KRBOX1C9JBD0 128 aa4.77□□□□□ -1.65
VPS50-218ENST00000485994 PAGE4O60829 102 aa4.77□□□□□ -1.65
VPS50-218ENST00000485994 NXPH4O95158 308 aa4.77□□□□□ -1.65
VPS50-218ENST00000485994 CXCL1P09341 107 aa4.77□□□□□ -1.65
VPS50-218ENST00000485994 DNAH10OSP0CZ25 163 aa4.77□□□□□ -1.65
VPS50-218ENST00000485994 MGST1P10620 155 aaKnown RBP4.77□□□□□ -1.65
VPS50-218ENST00000485994 TPT1P13693 172 aaKnown RBP4.77□□□□□ -1.65
VPS50-218ENST00000485994 UBE2G1P62253 170 aa4.77□□□□□ -1.65
VPS50-218ENST00000485994 ZNF506Q5JVG8 444 aa4.77□□□□□ -1.65
VPS50-218ENST00000485994 EIF5AL1Q6IS14 154 aaKnown RBP4.77□□□□□ -1.65
VPS50-218ENST00000485994 UFSP1Q6NVU6 142 aa4.77□□□□□ -1.65
VPS50-218ENST00000485994 Q6ZRN7 208 aaPredicted RBP4.77□□□□□ -1.65
VPS50-218ENST00000485994 Q86TA4 180 aa4.77□□□□□ -1.65
VPS50-218ENST00000485994 NFE4Q86UQ8 179 aa4.77□□□□□ -1.65
VPS50-218ENST00000485994 SLC51BQ86UW2 128 aa4.77□□□□□ -1.65
VPS50-218ENST00000485994 SLC25A29Q8N8R3 303 aa4.77□□□□□ -1.65
VPS50-218ENST00000485994 PCNPQ8WW12 178 aaKnown RBP4.77□□□□□ -1.65
VPS50-218ENST00000485994 PRADC1Q9BSG0 188 aa4.77□□□□□ -1.65
VPS50-218ENST00000485994 MLST8Q9BVC4 326 aa4.77□□□□□ -1.65
VPS50-218ENST00000485994 SCRT2Q9NQ03 307 aa4.77□□□□□ -1.65
VPS50-218ENST00000485994 DNAH5Q8TE73 4624 aa4.76□□□□□ -1.65
VPS50-218ENST00000485994 B4DEV8 164 aa4.76□□□□□ -1.65
VPS50-218ENST00000485994 PFDN1O60925 122 aa4.76□□□□□ -1.65
VPS50-218ENST00000485994 S100A4P26447 101 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms