RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 ADORA2A-AS1P86434 159 aa8.26□□□□□ -1.09
SRGAP3-207ENST00000485983 RNF183Q96D59 192 aa8.26□□□□□ -1.09
SRGAP3-207ENST00000485983 IGHV4OR15-8A0A075B7B6 117 aa8.26□□□□□ -1.09
SRGAP3-207ENST00000485983 A0A087WW49 117 aa8.26□□□□□ -1.09
SRGAP3-207ENST00000485983 LOC105371267A0A1B0GV96 52 aa8.26□□□□□ -1.09
SRGAP3-207ENST00000485983 V9GYV3 84 aa8.25□□□□□ -1.09
SRGAP3-207ENST00000485983 ZFP36P26651 326 aaKnown RBP8.25□□□□□ -1.09
SRGAP3-207ENST00000485983 C17orf77Q96MU5 243 aa8.25□□□□□ -1.09
SRGAP3-207ENST00000485983 DLEU1O43261 78 aa8.25□□□□□ -1.09
SRGAP3-207ENST00000485983 C14orf177Q52M58 125 aa8.25□□□□□ -1.09
SRGAP3-207ENST00000485983 C2orf70A6NJV1 201 aa8.25□□□□□ -1.09
SRGAP3-207ENST00000485983 ARTNQ5T4W7 220 aa8.24□□□□□ -1.09
SRGAP3-207ENST00000485983 ZGRF1Q86YA3 2104 aa8.24□□□□□ -1.09
SRGAP3-207ENST00000485983 TMEM89A2RUT3 159 aa8.24□□□□□ -1.09
SRGAP3-207ENST00000485983 C9orf47Q6ZRZ4 202 aa8.24□□□□□ -1.09
SRGAP3-207ENST00000485983 LTAP01374 205 aa8.24□□□□□ -1.09
SRGAP3-207ENST00000485983 FNDC1Q4ZHG4 1894 aaPredicted RBP8.24□□□□□ -1.09
SRGAP3-207ENST00000485983 SIP14410 1827 aa8.24□□□□□ -1.09
SRGAP3-207ENST00000485983 IGHV4-28A0A0C4DH34 117 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 RNF138Q8WVD3 245 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 C4orf3Q8WVX3 66 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 HIVEP2P31629 2446 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 C1orf147Q96MC9 270 aaPredicted RBP8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 H3BQ85 93 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 C5orf56Q8N8D9 126 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 OPRPNQ99935 248 aaPredicted RBP8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 K7EMT4 169 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 C16orf54Q6UWD8 224 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 BAALC-AS2P0C853 105 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 COX8AP10176 69 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 PRR20EP86478 221 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 PRR20CP86479 221 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 PRR20DP86480 221 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 PRR20BP86481 221 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 PRR20AP86496 221 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 CEND1Q8N111 149 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 CITED1Q99966 193 aa8.23□□□□□ -1.09
SRGAP3-207ENST00000485983 C9orf118A6NHY6 69 aa8.22□□□□□ -1.09
SRGAP3-207ENST00000485983 DEFB4AO15263 64 aa8.22□□□□□ -1.09
SRGAP3-207ENST00000485983 RSPO1Q2MKA7 263 aaPredicted RBP8.22□□□□□ -1.09
SRGAP3-207ENST00000485983 C11orf52Q96A22 123 aa8.22□□□□□ -1.09
SRGAP3-207ENST00000485983 TNCP24821 2201 aa8.22□□□□□ -1.09
SRGAP3-207ENST00000485983 PRSS47A8MTI9 375 aa8.22□□□□□ -1.09
SRGAP3-207ENST00000485983 C11orf45Q8TAV5 145 aa8.22□□□□□ -1.09
SRGAP3-207ENST00000485983 H0YGX0 51 aa8.22□□□□□ -1.09
SRGAP3-207ENST00000485983 MP68P56378 58 aa8.22□□□□□ -1.09
SRGAP3-207ENST00000485983 PYY3Q5JQD4 70 aa8.22□□□□□ -1.09
SRGAP3-207ENST00000485983 SND1-IT1Q9HBX3 110 aa8.22□□□□□ -1.09
SRGAP3-207ENST00000485983 KLK12Q9UKR0 248 aa8.22□□□□□ -1.09
SRGAP3-207ENST00000485983 GBF1Q92538 1859 aa8.21□□□□□ -1.09
SRGAP3-207ENST00000485983 F8W1H4 67 aa8.21□□□□□ -1.09
SRGAP3-207ENST00000485983 IFITM1P13164 125 aa8.21□□□□□ -1.09
SRGAP3-207ENST00000485983 ANKRD29Q8N6D5 301 aa8.21□□□□□ -1.09
SRGAP3-207ENST00000485983 COX7B2Q8TF08 81 aa8.21□□□□□ -1.09
SRGAP3-207ENST00000485983 RSPO3Q9BXY4 272 aaPredicted RBP8.21□□□□□ -1.09
SRGAP3-207ENST00000485983 IGLV11-55A0A075B6I3 123 aa8.21□□□□□ -1.09
SRGAP3-207ENST00000485983 GPHB5Q86YW7 130 aa8.21□□□□□ -1.09
SRGAP3-207ENST00000485983 ZNF664Q8N3J9 261 aa8.21□□□□□ -1.09
SRGAP3-207ENST00000485983 Q8N9W7 124 aa8.21□□□□□ -1.09
SRGAP3-207ENST00000485983 VSIG2Q96IQ7 327 aa8.21□□□□□ -1.09
SRGAP3-207ENST00000485983 TRBV7-3A0A075B6L6 115 aa8.21□□□□□ -1.1
SRGAP3-207ENST00000485983 IL15RAQ13261 267 aa8.21□□□□□ -1.1
SRGAP3-207ENST00000485983 ZNF726P1Q15940 193 aa8.21□□□□□ -1.1
SRGAP3-207ENST00000485983 CXCL5P42830 114 aa8.21□□□□□ -1.1
SRGAP3-207ENST00000485983 C11orf53Q8IXP5 236 aa8.21□□□□□ -1.1
SRGAP3-207ENST00000485983 NACAE9PAV3 2078 aa8.21□□□□□ -1.1
SRGAP3-207ENST00000485983 OTOGLQ3ZCN5 2332 aa8.21□□□□□ -1.1
SRGAP3-207ENST00000485983 CFC1BP0CG36 223 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 CFC1P0CG37 223 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 B9D2Q9BPU9 175 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 SPRY2O43597 315 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 IGLC2P0DOY2 106 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 IGLC3P0DOY3 106 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 CRYBA4P53673 196 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 SEM1Q6ZVN7 128 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 IGFBPL1Q8WX77 278 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 C20orf144Q9BQM9 153 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 PTPN13Q12923 2485 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 SPAG11BQ08648 103 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 C9JQL5 133 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 CTSGP08311 255 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 NREPQ16612 68 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 SHANK1Q9Y566 2161 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 TMEM258P61165 79 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 ETDBQ3ZM63 59 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 PRO0255Q9UI72 69 aa8.2□□□□□ -1.1
SRGAP3-207ENST00000485983 TICRRQ7Z2Z1 1910 aa8.19□□□□□ -1.1
SRGAP3-207ENST00000485983 I3L2K1 104 aa8.19□□□□□ -1.1
SRGAP3-207ENST00000485983 DYSFO75923 2080 aa8.19□□□□□ -1.1
SRGAP3-207ENST00000485983 A0A1B0GX51 115 aa8.19□□□□□ -1.1
SRGAP3-207ENST00000485983 K7EIM0 57 aa8.19□□□□□ -1.1
SRGAP3-207ENST00000485983 LOXL1Q08397 574 aaPredicted RBP8.19□□□□□ -1.1
SRGAP3-207ENST00000485983 CUL9Q8IWT3 2517 aa8.19□□□□□ -1.1
SRGAP3-207ENST00000485983 ACACBO00763 2458 aa8.19□□□□□ -1.1
SRGAP3-207ENST00000485983 LRRC75A-AS1Q8N1F1 130 aa8.19□□□□□ -1.1
SRGAP3-207ENST00000485983 DKK2Q9UBU2 259 aa8.19□□□□□ -1.1
SRGAP3-207ENST00000485983 DNAJC9-AS1A6NH13 148 aa8.19□□□□□ -1.1
SRGAP3-207ENST00000485983 RBM3P98179 157 aaKnown RBP8.19□□□□□ -1.1
SRGAP3-207ENST00000485983 ZFP2Q6ZN57 461 aa8.19□□□□□ -1.1
SRGAP3-207ENST00000485983 NDUFA11Q86Y39 141 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 185.3 ms