RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 ARMS2P0C7Q2 107 aa14.08□□□□□ -0.16
COL6A2-208ENST00000485591 RPS20P60866 119 aaKnown RBP14.08□□□□□ -0.16
COL6A2-208ENST00000485591 NDUFAF3Q9BU61 184 aa14.08□□□□□ -0.16
COL6A2-208ENST00000485591 RNASE7Q9H1E1 156 aaKnown RBP14.08□□□□□ -0.16
COL6A2-208ENST00000485591 SCRT2Q9NQ03 307 aa14.08□□□□□ -0.16
COL6A2-208ENST00000485591 LINC00862A6NCI5 91 aa14.07□□□□□ -0.16
COL6A2-208ENST00000485591 HTN3P15516 51 aa14.07□□□□□ -0.16
COL6A2-208ENST00000485591 ZNF876PQ49A33 203 aa14.07□□□□□ -0.16
COL6A2-208ENST00000485591 COMMD7Q86VX2 200 aa14.07□□□□□ -0.16
COL6A2-208ENST00000485591 RPP21Q9H633 154 aaKnown RBP14.07□□□□□ -0.16
COL6A2-208ENST00000485591 KLK5Q9Y337 293 aaPredicted RBP14.07□□□□□ -0.16
COL6A2-208ENST00000485591 XKRY2A2RUG3 117 aa14.06□□□□□ -0.16
COL6A2-208ENST00000485591 RPL23P62829 140 aaKnown RBP14.06□□□□□ -0.16
COL6A2-208ENST00000485591 SNAI2O43623 268 aa14.05□□□□□ -0.16
COL6A2-208ENST00000485591 ERVFC1-1P60608 527 aa14.05□□□□□ -0.16
COL6A2-208ENST00000485591 PIK3CD-AS1Q5SR53 167 aa14.05□□□□□ -0.16
COL6A2-208ENST00000485591 ISOC2Q96AB3 205 aa14.05□□□□□ -0.16
COL6A2-208ENST00000485591 SSBP4Q9BWG4 385 aaPredicted RBP14.05□□□□□ -0.16
COL6A2-208ENST00000485591 PHLDA3Q9Y5J5 127 aa14.05□□□□□ -0.16
COL6A2-208ENST00000485591 NACAE9PAV3 2078 aa14.05□□□□□ -0.16
COL6A2-208ENST00000485591 OR5AL1P0C617 328 aa14.04□□□□□ -0.16
COL6A2-208ENST00000485591 IGLC6P0CF74 106 aa14.04□□□□□ -0.16
COL6A2-208ENST00000485591 ADIRFQ15847 76 aa14.04□□□□□ -0.16
COL6A2-208ENST00000485591 TRAV4A0A0B4J268 109 aa14.03□□□□□ -0.16
COL6A2-208ENST00000485591 F5H768 121 aa14.03□□□□□ -0.16
COL6A2-208ENST00000485591 GATCO43716 136 aaKnown RBP14.03□□□□□ -0.16
COL6A2-208ENST00000485591 GZMBP10144 247 aa14.03□□□□□ -0.16
COL6A2-208ENST00000485591 SYT8Q8NBV8 401 aa14.03□□□□□ -0.16
COL6A2-208ENST00000485591 FAM210BQ96KR6 192 aa14.03□□□□□ -0.16
COL6A2-208ENST00000485591 OSTCQ9NRP0 149 aa14.03□□□□□ -0.16
COL6A2-208ENST00000485591 HOXA5P20719 270 aa14.02□□□□□ -0.17
COL6A2-208ENST00000485591 CT83Q5H943 113 aa14.02□□□□□ -0.17
COL6A2-208ENST00000485591 ZFP82Q8N141 532 aa14.02□□□□□ -0.17
COL6A2-208ENST00000485591 POM121L12Q8N7R1 296 aa14.02□□□□□ -0.17
COL6A2-208ENST00000485591 CSMD3Q7Z407 3707 aa14.02□□□□□ -0.17
COL6A2-208ENST00000485591 IGLL5B9A064 214 aa14.01□□□□□ -0.17
COL6A2-208ENST00000485591 NXPH4O95158 308 aa14.01□□□□□ -0.17
COL6A2-208ENST00000485591 IGHV3-53P01767 116 aa14.01□□□□□ -0.17
COL6A2-208ENST00000485591 DMRTA1Q5VZB9 504 aa14.01□□□□□ -0.17
COL6A2-208ENST00000485591 FER1L6-AS1Q8NA97 138 aa14.01□□□□□ -0.17
COL6A2-208ENST00000485591 OR4C5Q8NGB2 326 aa14.01□□□□□ -0.17
COL6A2-208ENST00000485591 OR10AG1Q8NH19 301 aa14.01□□□□□ -0.17
COL6A2-208ENST00000485591 STARD9Q9P2P6 4700 aa14□□□□□ -0.17
COL6A2-208ENST00000485591 IGHV4-4A0A075B6R2 117 aa14□□□□□ -0.17
COL6A2-208ENST00000485591 A0A1W2PPQ1 181 aa14□□□□□ -0.17
COL6A2-208ENST00000485591 TMEM218A2RU14 115 aa14□□□□□ -0.17
COL6A2-208ENST00000485591 A8MWV9 139 aa14□□□□□ -0.17
COL6A2-208ENST00000485591 M0R381 172 aa14□□□□□ -0.17
COL6A2-208ENST00000485591 RS1O15537 224 aa14□□□□□ -0.17
COL6A2-208ENST00000485591 TCTAP57738 103 aa14□□□□□ -0.17
COL6A2-208ENST00000485591 C15orf54Q8N8G6 183 aa14□□□□□ -0.17
COL6A2-208ENST00000485591 SFRP2Q96HF1 295 aa14□□□□□ -0.17
COL6A2-208ENST00000485591 ZNF479Q96JC4 524 aa14□□□□□ -0.17
COL6A2-208ENST00000485591 A8MWL6 223 aa13.99□□□□□ -0.17
COL6A2-208ENST00000485591 PNRC1Q12796 327 aaPredicted RBP13.99□□□□□ -0.17
COL6A2-208ENST00000485591 CFAP126Q5VTH2 177 aa13.99□□□□□ -0.17
COL6A2-208ENST00000485591 TMEM88Q6PEY1 159 aa13.99□□□□□ -0.17
COL6A2-208ENST00000485591 F2Z2F3 143 aa13.98□□□□□ -0.17
COL6A2-208ENST00000485591 CIDEAO60543 219 aa13.98□□□□□ -0.17
COL6A2-208ENST00000485591 ADCYAP1P18509 176 aa13.98□□□□□ -0.17
COL6A2-208ENST00000485591 CTRLP40313 264 aa13.98□□□□□ -0.17
COL6A2-208ENST00000485591 FHL2Q14192 279 aa13.98□□□□□ -0.17
COL6A2-208ENST00000485591 OR10G8Q8NGN5 311 aa13.98□□□□□ -0.17
COL6A2-208ENST00000485591 TPPP3Q9BW30 176 aa13.98□□□□□ -0.17
COL6A2-208ENST00000485591 V9GYV3 84 aa13.98□□□□□ -0.17
COL6A2-208ENST00000485591 SPANXN1Q5VSR9 72 aa13.97□□□□□ -0.17
COL6A2-208ENST00000485591 GTSF1Q8WW33 167 aa13.97□□□□□ -0.17
COL6A2-208ENST00000485591 TRGV4A0A0C4DH28 118 aa13.96□□□□□ -0.17
COL6A2-208ENST00000485591 F8W036 122 aa13.96□□□□□ -0.17
COL6A2-208ENST00000485591 CACNG7P62955 275 aa13.96□□□□□ -0.17
COL6A2-208ENST00000485591 SLAQ13239 276 aa13.96□□□□□ -0.17
COL6A2-208ENST00000485591 LYZL1Q6UWQ5 148 aa13.96□□□□□ -0.17
COL6A2-208ENST00000485591 TSKUQ8WUA8 353 aa13.96□□□□□ -0.17
COL6A2-208ENST00000485591 GFRA4Q9GZZ7 299 aa13.96□□□□□ -0.17
COL6A2-208ENST00000485591 APLNQ9ULZ1 77 aa13.96□□□□□ -0.17
COL6A2-208ENST00000485591 TRAV26-1A0A087WT03 109 aa13.95□□□□□ -0.18
COL6A2-208ENST00000485591 MUC21A0A0G2JKD1 596 aa13.95□□□□□ -0.18
COL6A2-208ENST00000485591 MUC21A0A140T8X8 626 aa13.95□□□□□ -0.18
COL6A2-208ENST00000485591 H3BNG1 76 aa13.95□□□□□ -0.18
COL6A2-208ENST00000485591 ZFP2Q6ZN57 461 aa13.95□□□□□ -0.18
COL6A2-208ENST00000485591 C15orf53Q8NAA6 179 aa13.95□□□□□ -0.18
COL6A2-208ENST00000485591 SEC11CQ9BY50 192 aa13.95□□□□□ -0.18
COL6A2-208ENST00000485591 CNFNQ9BYD5 112 aa13.95□□□□□ -0.18
COL6A2-208ENST00000485591 JPT2Q9H910 190 aa13.95□□□□□ -0.18
COL6A2-208ENST00000485591 PRO0255Q9UI72 69 aa13.95□□□□□ -0.18
COL6A2-208ENST00000485591 FAM231BA6NCW3 169 aa13.94□□□□□ -0.18
COL6A2-208ENST00000485591 FOXA3P55318 350 aaPredicted RBP13.94□□□□□ -0.18
COL6A2-208ENST00000485591 WDR73Q6P4I2 378 aa13.94□□□□□ -0.18
COL6A2-208ENST00000485591 HHLA3Q9XRX5 114 aa13.94□□□□□ -0.18
COL6A2-208ENST00000485591 DYNC2H1Q8NCM8 4307 aaKnown RBP13.93□□□□□ -0.18
COL6A2-208ENST00000485591 A0A0J9YY99 117 aa13.93□□□□□ -0.18
COL6A2-208ENST00000485591 RHODO00212 210 aa13.93□□□□□ -0.18
COL6A2-208ENST00000485591 CRYBA4P53673 196 aa13.93□□□□□ -0.18
COL6A2-208ENST00000485591 UFSP1Q6NVU6 142 aa13.93□□□□□ -0.18
COL6A2-208ENST00000485591 VSIG2Q96IQ7 327 aa13.93□□□□□ -0.18
COL6A2-208ENST00000485591 SAMD10Q9BYL1 202 aa13.93□□□□□ -0.18
COL6A2-208ENST00000485591 CRYGDP07320 174 aa13.92□□□□□ -0.18
COL6A2-208ENST00000485591 GATA1P15976 413 aaPredicted RBP13.92□□□□□ -0.18
COL6A2-208ENST00000485591 AP1S3Q96PC3 154 aa13.92□□□□□ -0.18
COL6A2-208ENST00000485591 IGHV3-73A0A0B4J1V6 119 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms