RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 IGHV1-69DA0A0B4J2H0 117 aa8.1□□□□□ -1.11
COL12A1-207ENST00000483888 DAZ2Q13117 558 aaKnown RBP8.1□□□□□ -1.11
COL12A1-207ENST00000483888 DAZ4Q86SG3 579 aaKnown RBP8.1□□□□□ -1.11
COL12A1-207ENST00000483888 DAZ1Q9NQZ3 744 aaKnown RBP8.1□□□□□ -1.11
COL12A1-207ENST00000483888 DAZ3Q9NR90 486 aaKnown RBP8.1□□□□□ -1.11
COL12A1-207ENST00000483888 BUB1B-PAK6H3BSN5 160 aa8.1□□□□□ -1.11
COL12A1-207ENST00000483888 FAM27E3Q08E93 113 aa8.1□□□□□ -1.11
COL12A1-207ENST00000483888 FOXE3Q13461 319 aa8.1□□□□□ -1.11
COL12A1-207ENST00000483888 LECT2O14960 151 aa8.1□□□□□ -1.11
COL12A1-207ENST00000483888 RPL18AQ02543 176 aaKnown RBP8.1□□□□□ -1.11
COL12A1-207ENST00000483888 ZFP36L1Q07352 338 aaKnown RBP8.1□□□□□ -1.11
COL12A1-207ENST00000483888 Q9HAA7 133 aa8.1□□□□□ -1.11
COL12A1-207ENST00000483888 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.1□□□□□ -1.11
COL12A1-207ENST00000483888 SPINK13Q1W4C9 94 aa8.1□□□□□ -1.11
COL12A1-207ENST00000483888 RNF5Q99942 180 aa8.1□□□□□ -1.11
COL12A1-207ENST00000483888 TOMM6Q96B49 74 aa8.09□□□□□ -1.11
COL12A1-207ENST00000483888 HIGD2BQ4VC39 106 aa8.09□□□□□ -1.11
COL12A1-207ENST00000483888 K7EM74 188 aa8.09□□□□□ -1.11
COL12A1-207ENST00000483888 ENHOQ6UWT2 76 aa8.09□□□□□ -1.11
COL12A1-207ENST00000483888 OPRPNQ99935 248 aaPredicted RBP8.09□□□□□ -1.11
COL12A1-207ENST00000483888 TM2D2Q9BX73 214 aa8.09□□□□□ -1.11
COL12A1-207ENST00000483888 ETV2O00321 342 aaPredicted RBP8.09□□□□□ -1.11
COL12A1-207ENST00000483888 CCL19Q99731 98 aa8.09□□□□□ -1.11
COL12A1-207ENST00000483888 IGHV1-18A0A0C4DH31 117 aa8.09□□□□□ -1.11
COL12A1-207ENST00000483888 FHL1Q13642 323 aa8.09□□□□□ -1.11
COL12A1-207ENST00000483888 ATRXP46100 2492 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 ZNF134P52741 427 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 WDR86Q86TI4 376 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 C1orf147Q96MC9 270 aaPredicted RBP8.08□□□□□ -1.12
COL12A1-207ENST00000483888 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.08□□□□□ -1.12
COL12A1-207ENST00000483888 SMIM26A0A096LP01 95 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 IGKV2-29A2NJV5 120 aaPredicted RBP8.08□□□□□ -1.12
COL12A1-207ENST00000483888 UCNP55089 124 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 ZNRF2Q8NHG8 242 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 FAM223BA6NKX1 122 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 FAM223AQ8IWN6 122 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 IGHV1-46P01743 117 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 CFHR1Q03591 330 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 PIK3CD-AS1Q5SR53 167 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 ZNRD1Q9P1U0 126 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 PRR20EP86478 221 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 PRR20CP86479 221 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 PRR20DP86480 221 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 PRR20BP86481 221 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 PRR20AP86496 221 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 IGKV2D-26A0A0A0MRZ7 120 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 C17orf77Q96MU5 243 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 CACNA1HO95180 2353 aa8.08□□□□□ -1.12
COL12A1-207ENST00000483888 IGKV1D-17A0A075B6S4 117 aa8.07□□□□□ -1.12
COL12A1-207ENST00000483888 AGPAT4-IT1Q9H0P7 198 aa8.07□□□□□ -1.12
COL12A1-207ENST00000483888 WNK1Q9H4A3 2382 aa8.07□□□□□ -1.12
COL12A1-207ENST00000483888 FNDC1Q4ZHG4 1894 aaPredicted RBP8.07□□□□□ -1.12
COL12A1-207ENST00000483888 LOC107984640A0A0U1RRK4 108 aa8.07□□□□□ -1.12
COL12A1-207ENST00000483888 INSL3P51460 131 aa8.07□□□□□ -1.12
COL12A1-207ENST00000483888 LINC01560Q8TB33 94 aa8.07□□□□□ -1.12
COL12A1-207ENST00000483888 RHPN1-AS1Q9BWJ2 59 aa8.07□□□□□ -1.12
COL12A1-207ENST00000483888 C11orf86A6NJI1 115 aa8.07□□□□□ -1.12
COL12A1-207ENST00000483888 NRGNQ92686 78 aa8.07□□□□□ -1.12
COL12A1-207ENST00000483888 COL11A2P13942 1736 aaPredicted RBP8.07□□□□□ -1.12
COL12A1-207ENST00000483888 C1orf210Q8IVY1 113 aa8.07□□□□□ -1.12
COL12A1-207ENST00000483888 YPEL4Q96NS1 127 aa8.07□□□□□ -1.12
COL12A1-207ENST00000483888 SERP1Q9Y6X1 66 aa8.07□□□□□ -1.12
COL12A1-207ENST00000483888 CACNA1EQ15878 2313 aa8.07□□□□□ -1.12
COL12A1-207ENST00000483888 UBE2E1P51965 193 aa8.07□□□□□ -1.12
COL12A1-207ENST00000483888 RPL35AP18077 110 aaKnown RBP8.06□□□□□ -1.12
COL12A1-207ENST00000483888 CFHR3Q02985 330 aa8.06□□□□□ -1.12
COL12A1-207ENST00000483888 ATP5EP2Q5VTU8 51 aa8.06□□□□□ -1.12
COL12A1-207ENST00000483888 HIST2H2BCQ6DN03 193 aa8.06□□□□□ -1.12
COL12A1-207ENST00000483888 HIST2H2BDQ6DRA6 164 aa8.06□□□□□ -1.12
COL12A1-207ENST00000483888 MRPS12O15235 138 aaKnown RBP8.06□□□□□ -1.12
COL12A1-207ENST00000483888 VMO1Q7Z5L0 202 aa8.06□□□□□ -1.12
COL12A1-207ENST00000483888 BLCAPP62952 87 aa8.06□□□□□ -1.12
COL12A1-207ENST00000483888 CLPSL2Q6UWE3 100 aa8.06□□□□□ -1.12
COL12A1-207ENST00000483888 GAFA1Q96PS6 74 aa8.06□□□□□ -1.12
COL12A1-207ENST00000483888 MBD3L2Q8NHZ7 208 aaPredicted RBP8.06□□□□□ -1.12
COL12A1-207ENST00000483888 USMG5Q96IX5 58 aa8.06□□□□□ -1.12
COL12A1-207ENST00000483888 COL4A1P02462 1669 aa8.05□□□□□ -1.12
COL12A1-207ENST00000483888 Q6Q795 121 aa8.05□□□□□ -1.12
COL12A1-207ENST00000483888 NSUN5P1Q3KNT7 163 aa8.05□□□□□ -1.12
COL12A1-207ENST00000483888 GGNQ86UU5 652 aa8.05□□□□□ -1.12
COL12A1-207ENST00000483888 TET2Q6N021 2002 aaPredicted RBP8.05□□□□□ -1.12
COL12A1-207ENST00000483888 LYRM9A8MSI8 78 aa8.05□□□□□ -1.12
COL12A1-207ENST00000483888 RPL39P62891 51 aaKnown RBP8.05□□□□□ -1.12
COL12A1-207ENST00000483888 C9orf106Q8NAJ2 232 aa8.05□□□□□ -1.12
COL12A1-207ENST00000483888 PPDPFQ9H3Y8 114 aa8.05□□□□□ -1.12
COL12A1-207ENST00000483888 MUC4Q99102 2169 aa8.04□□□□□ -1.12
COL12A1-207ENST00000483888 PATE3B3GLJ2 98 aa8.04□□□□□ -1.12
COL12A1-207ENST00000483888 GNRH2O43555 120 aa8.04□□□□□ -1.12
COL12A1-207ENST00000483888 XCL1P47992 114 aa8.04□□□□□ -1.12
COL12A1-207ENST00000483888 LYNX1G3V0Z9 82 aa8.04□□□□□ -1.12
COL12A1-207ENST00000483888 LYNX1P0DP58 116 aa8.04□□□□□ -1.12
COL12A1-207ENST00000483888 C7orf69Q9H7B7 122 aa8.04□□□□□ -1.12
COL12A1-207ENST00000483888 CFAP126Q5VTH2 177 aa8.04□□□□□ -1.12
COL12A1-207ENST00000483888 WT1-ASQ06250 92 aa8.04□□□□□ -1.12
COL12A1-207ENST00000483888 C2orf91Q6ZV80 131 aa8.04□□□□□ -1.12
COL12A1-207ENST00000483888 ATP1A1-AS1Q5TC04 95 aa8.04□□□□□ -1.12
COL12A1-207ENST00000483888 ZNF833PQ6ZTB9 187 aa8.04□□□□□ -1.12
COL12A1-207ENST00000483888 A0A0J9YXV3 536 aa8.03□□□□□ -1.12
COL12A1-207ENST00000483888 TMEM178BH3BS89 294 aa8.03□□□□□ -1.12
COL12A1-207ENST00000483888 P0DMU3 169 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms