RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 TXNDC17Q9BRA2 123 aa8.16□□□□□ -1.1
HMGN1-213ENST00000482192 FRAS1Q86XX4 4008 aa8.15□□□□□ -1.1
HMGN1-213ENST00000482192 PGPEP1LA6NFU8 196 aa8.15□□□□□ -1.1
HMGN1-213ENST00000482192 B4DEV8 164 aa8.15□□□□□ -1.1
HMGN1-213ENST00000482192 RS1O15537 224 aa8.15□□□□□ -1.1
HMGN1-213ENST00000482192 SH2D1AO60880 128 aa8.15□□□□□ -1.1
HMGN1-213ENST00000482192 S100A9P06702 114 aaKnown RBP8.15□□□□□ -1.1
HMGN1-213ENST00000482192 GATA1P15976 413 aaPredicted RBP8.15□□□□□ -1.1
HMGN1-213ENST00000482192 CRIP1P50238 77 aa8.15□□□□□ -1.1
HMGN1-213ENST00000482192 RAB5CP51148 216 aa8.15□□□□□ -1.1
HMGN1-213ENST00000482192 TNP2Q05952 138 aa8.15□□□□□ -1.1
HMGN1-213ENST00000482192 PIK3CD-AS1Q5SR53 167 aa8.15□□□□□ -1.1
HMGN1-213ENST00000482192 SH2D6Q7Z4S9 175 aa8.15□□□□□ -1.1
HMGN1-213ENST00000482192 IL36BQ9NZH7 164 aa8.15□□□□□ -1.1
HMGN1-213ENST00000482192 MUC4Q99102 2169 aa8.15□□□□□ -1.11
HMGN1-213ENST00000482192 TRBV6-4A0A1B0GX49 114 aa8.14□□□□□ -1.11
HMGN1-213ENST00000482192 KRBOX1C9JBD0 128 aa8.14□□□□□ -1.11
HMGN1-213ENST00000482192 M0R036 132 aa8.14□□□□□ -1.11
HMGN1-213ENST00000482192 MGST1P10620 155 aaKnown RBP8.14□□□□□ -1.11
HMGN1-213ENST00000482192 ZNF674Q2M3X9 581 aa8.14□□□□□ -1.11
HMGN1-213ENST00000482192 Q6ZNX1 250 aa8.14□□□□□ -1.11
HMGN1-213ENST00000482192 SLC25A29Q8N8R3 303 aa8.14□□□□□ -1.11
HMGN1-213ENST00000482192 NHLRC2Q8NBF2 726 aa8.14□□□□□ -1.11
HMGN1-213ENST00000482192 DNAH6Q9C0G6 4158 aa8.13□□□□□ -1.11
HMGN1-213ENST00000482192 LOC100131303A0A0U1RQF7 123 aa8.13□□□□□ -1.11
HMGN1-213ENST00000482192 A8MWV9 139 aa8.13□□□□□ -1.11
HMGN1-213ENST00000482192 H3BVH4 76 aa8.13□□□□□ -1.11
HMGN1-213ENST00000482192 C1QBP02746 253 aa8.13□□□□□ -1.11
HMGN1-213ENST00000482192 RHOHQ15669 191 aa8.13□□□□□ -1.11
HMGN1-213ENST00000482192 LINC01559Q495D7 138 aa8.13□□□□□ -1.11
HMGN1-213ENST00000482192 DNLZQ5SXM8 178 aa8.13□□□□□ -1.11
HMGN1-213ENST00000482192 PRADC1Q9BSG0 188 aa8.13□□□□□ -1.11
HMGN1-213ENST00000482192 MANBALQ9NQG1 85 aa8.13□□□□□ -1.11
HMGN1-213ENST00000482192 DNAH10Q8IVF4 4471 aa8.12□□□□□ -1.11
HMGN1-213ENST00000482192 TRAV9-2A0A087WT02 112 aa8.12□□□□□ -1.11
HMGN1-213ENST00000482192 IGHV3-73A0A0B4J1V6 119 aa8.12□□□□□ -1.11
HMGN1-213ENST00000482192 TRAV1-1A0A0B4J248 108 aa8.12□□□□□ -1.11
HMGN1-213ENST00000482192 SCO2A0A1W2PP80 73 aa8.12□□□□□ -1.11
HMGN1-213ENST00000482192 TEX46H3BTG2 121 aa8.12□□□□□ -1.11
HMGN1-213ENST00000482192 LINC00315P59091 139 aa8.12□□□□□ -1.11
HMGN1-213ENST00000482192 ZFP2Q6ZN57 461 aa8.12□□□□□ -1.11
HMGN1-213ENST00000482192 SYT8Q8NBV8 401 aa8.12□□□□□ -1.11
HMGN1-213ENST00000482192 PARLQ9H300 379 aa8.12□□□□□ -1.11
HMGN1-213ENST00000482192 GNG13Q9P2W3 67 aa8.12□□□□□ -1.11
HMGN1-213ENST00000482192 LY96Q9Y6Y9 160 aa8.12□□□□□ -1.11
HMGN1-213ENST00000482192 GRIFINA4D1Z8 144 aa8.11□□□□□ -1.11
HMGN1-213ENST00000482192 K7EP13 123 aa8.11□□□□□ -1.11
HMGN1-213ENST00000482192 ARMS2P0C7Q2 107 aa8.11□□□□□ -1.11
HMGN1-213ENST00000482192 MED14OSP0DP75 135 aa8.11□□□□□ -1.11
HMGN1-213ENST00000482192 TIRAPP58753 221 aa8.11□□□□□ -1.11
HMGN1-213ENST00000482192 AKAP14Q86UN6 197 aa8.11□□□□□ -1.11
HMGN1-213ENST00000482192 SLC51BQ86UW2 128 aa8.11□□□□□ -1.11
HMGN1-213ENST00000482192 WFDC10BQ8IUB3 73 aa8.11□□□□□ -1.11
HMGN1-213ENST00000482192 TMSB15BA0A087X1C1 80 aa8.1□□□□□ -1.11
HMGN1-213ENST00000482192 DNAH10OSP0CZ25 163 aa8.1□□□□□ -1.11
HMGN1-213ENST00000482192 EVI2AP22794 236 aa8.1□□□□□ -1.11
HMGN1-213ENST00000482192 SULT1A2P50226 295 aa8.1□□□□□ -1.11
HMGN1-213ENST00000482192 CCL20P78556 96 aa8.1□□□□□ -1.11
HMGN1-213ENST00000482192 BAGE2Q86Y30 109 aa8.1□□□□□ -1.11
HMGN1-213ENST00000482192 MLST8Q9BVC4 326 aa8.1□□□□□ -1.11
HMGN1-213ENST00000482192 SCRT2Q9NQ03 307 aa8.1□□□□□ -1.11
HMGN1-213ENST00000482192 PHLDA3Q9Y5J5 127 aa8.1□□□□□ -1.11
HMGN1-213ENST00000482192 HECTD4Q9Y4D8 3996 aa8.09□□□□□ -1.11
HMGN1-213ENST00000482192 hCG_2014768A0A024R1R8 64 aa8.09□□□□□ -1.11
HMGN1-213ENST00000482192 RHODO00212 210 aa8.09□□□□□ -1.11
HMGN1-213ENST00000482192 RPL35P42766 123 aaKnown RBP8.09□□□□□ -1.11
HMGN1-213ENST00000482192 NFE4Q86UQ8 179 aa8.09□□□□□ -1.11
HMGN1-213ENST00000482192 ZNF575Q86XF7 245 aa8.09□□□□□ -1.11
HMGN1-213ENST00000482192 ZFP82Q8N141 532 aa8.09□□□□□ -1.11
HMGN1-213ENST00000482192 C11orf52Q96A22 123 aa8.09□□□□□ -1.11
HMGN1-213ENST00000482192 TRAV8-6A0A0B4J262 113 aa8.08□□□□□ -1.12
HMGN1-213ENST00000482192 M0R381 172 aa8.08□□□□□ -1.12
HMGN1-213ENST00000482192 IFNA1P01562 189 aa8.08□□□□□ -1.12
HMGN1-213ENST00000482192 UFSP1Q6NVU6 142 aa8.08□□□□□ -1.12
HMGN1-213ENST00000482192 Q6ZSN1 163 aa8.08□□□□□ -1.12
HMGN1-213ENST00000482192 C10orf126Q8N4M7 172 aa8.08□□□□□ -1.12
HMGN1-213ENST00000482192 SAMD10Q9BYL1 202 aa8.08□□□□□ -1.12
HMGN1-213ENST00000482192 JPT2Q9H910 190 aa8.08□□□□□ -1.12
HMGN1-213ENST00000482192 DNAH2Q9P225 4427 aa8.07□□□□□ -1.12
HMGN1-213ENST00000482192 IGHV3-38A0A0C4DH36 116 aa8.07□□□□□ -1.12
HMGN1-213ENST00000482192 C16orf90A8MZG2 172 aa8.07□□□□□ -1.12
HMGN1-213ENST00000482192 PDE6DO43924 150 aa8.07□□□□□ -1.12
HMGN1-213ENST00000482192 CXCL1P09341 107 aa8.07□□□□□ -1.12
HMGN1-213ENST00000482192 MEF2BQ02080 365 aaPredicted RBP8.07□□□□□ -1.12
HMGN1-213ENST00000482192 OR10J3Q5JRS4 329 aa8.07□□□□□ -1.12
HMGN1-213ENST00000482192 FAM74A4Q5TZK3 123 aa8.07□□□□□ -1.12
HMGN1-213ENST00000482192 PRR27Q6MZM9 219 aa8.07□□□□□ -1.12
HMGN1-213ENST00000482192 Q6ZRN7 208 aaPredicted RBP8.07□□□□□ -1.12
HMGN1-213ENST00000482192 C9orf62Q8N4C0 152 aa8.07□□□□□ -1.12
HMGN1-213ENST00000482192 ATP6V0E2Q8NHE4 81 aa8.07□□□□□ -1.12
HMGN1-213ENST00000482192 SFRP2Q96HF1 295 aa8.07□□□□□ -1.12
HMGN1-213ENST00000482192 DERL1Q9BUN8 251 aa8.07□□□□□ -1.12
HMGN1-213ENST00000482192 GTSF1LQ9H1H1 148 aa8.07□□□□□ -1.12
HMGN1-213ENST00000482192 MSRB1Q9NZV6 116 aa8.07□□□□□ -1.12
HMGN1-213ENST00000482192 CRYGDP07320 174 aa8.06□□□□□ -1.12
HMGN1-213ENST00000482192 LINC00694P0DN24 101 aa8.06□□□□□ -1.12
HMGN1-213ENST00000482192 RPL19P84098 196 aaKnown RBP8.06□□□□□ -1.12
HMGN1-213ENST00000482192 CENPWQ5EE01 88 aa8.06□□□□□ -1.12
HMGN1-213ENST00000482192 LELP1Q5T871 98 aa8.06□□□□□ -1.12
HMGN1-213ENST00000482192 SPATA12Q7Z6I5 190 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms