RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 TRBV7-6A0A0J9YX20 115 aa-0.44□□□□□ -2.48
KDM1A-204ENST00000481879 TRBV10-1A0A0K0K1A3 114 aa-0.44□□□□□ -2.48
KDM1A-204ENST00000481879 NMBP08949 121 aa-0.44□□□□□ -2.48
KDM1A-204ENST00000481879 PYYP10082 97 aa-0.44□□□□□ -2.48
KDM1A-204ENST00000481879 ADCYAP1P18509 176 aa-0.44□□□□□ -2.48
KDM1A-204ENST00000481879 SDC4P31431 198 aa-0.44□□□□□ -2.48
KDM1A-204ENST00000481879 RPL22P35268 128 aaKnown RBP-0.44□□□□□ -2.48
KDM1A-204ENST00000481879 LSM3P62310 102 aaKnown RBP-0.44□□□□□ -2.48
KDM1A-204ENST00000481879 THEM6Q8WUY1 208 aa-0.44□□□□□ -2.48
KDM1A-204ENST00000481879 NAT14Q8WUY8 206 aa-0.44□□□□□ -2.48
KDM1A-204ENST00000481879 LRP1BQ9NZR2 4599 aa-0.44□□□□□ -2.48
KDM1A-204ENST00000481879 ABCA13Q86UQ4 5058 aa-0.44□□□□□ -2.48
KDM1A-204ENST00000481879 FAT2Q9NYQ8 4349 aa-0.45□□□□□ -2.48
KDM1A-204ENST00000481879 MYCBP2O75592 4640 aa-0.45□□□□□ -2.48
KDM1A-204ENST00000481879 FLNBO75369 2602 aaKnown RBP-0.45□□□□□ -2.48
KDM1A-204ENST00000481879 SOGA1O94964 1423 aa-0.45□□□□□ -2.48
KDM1A-204ENST00000481879 LAMA2P24043 3122 aaKnown RBP-0.45□□□□□ -2.48
KDM1A-204ENST00000481879 CELSR2Q9HCU4 2923 aa-0.45□□□□□ -2.48
KDM1A-204ENST00000481879 TEX49A0A1B0GTD5 131 aa-0.45□□□□□ -2.48
KDM1A-204ENST00000481879 OR2H2O95918 312 aa-0.45□□□□□ -2.48
KDM1A-204ENST00000481879 GNG10P50151 68 aa-0.45□□□□□ -2.48
KDM1A-204ENST00000481879 POLR2HP52434 150 aaKnown RBP-0.45□□□□□ -2.48
KDM1A-204ENST00000481879 PCBD1P61457 104 aa-0.45□□□□□ -2.48
KDM1A-204ENST00000481879 OR4S1Q8NGB4 309 aa-0.45□□□□□ -2.48
KDM1A-204ENST00000481879 N4BP2Q86UW6 1770 aaPredicted RBP-0.45□□□□□ -2.48
KDM1A-204ENST00000481879 DOPEY2Q9Y3R5 2298 aa-0.45□□□□□ -2.48
KDM1A-204ENST00000481879 CAMSAP1Q5T5Y3 1602 aa-0.46□□□□□ -2.48
KDM1A-204ENST00000481879 USP9XQ93008 2570 aaPredicted RBP-0.46□□□□□ -2.48
KDM1A-204ENST00000481879 MXRA5Q9NR99 2828 aa-0.46□□□□□ -2.48
KDM1A-204ENST00000481879 YTHDC2Q9H6S0 1430 aaKnown RBP-0.46□□□□□ -2.48
KDM1A-204ENST00000481879 DNHD1Q96M86 4753 aa-0.46□□□□□ -2.48
KDM1A-204ENST00000481879 MYLKQ15746 1914 aa-0.46□□□□□ -2.48
KDM1A-204ENST00000481879 RBBP6Q7Z6E9 1792 aaKnown RBP-0.46□□□□□ -2.48
KDM1A-204ENST00000481879 CXorf51AA0A1B0GTR3 108 aa-0.46□□□□□ -2.48
KDM1A-204ENST00000481879 MCRIP1C9JLW8 97 aa-0.46□□□□□ -2.48
KDM1A-204ENST00000481879 ZNF670-ZNF695F2Z2N8 137 aa-0.46□□□□□ -2.48
KDM1A-204ENST00000481879 UQCRQO14949 82 aa-0.46□□□□□ -2.48
KDM1A-204ENST00000481879 APOC1P02654 83 aa-0.46□□□□□ -2.48
KDM1A-204ENST00000481879 BPESC1Q9GZL8 116 aa-0.46□□□□□ -2.48
KDM1A-204ENST00000481879 PCBD2Q9H0N5 130 aa-0.46□□□□□ -2.48
KDM1A-204ENST00000481879 VWFP04275 2813 aa-0.46□□□□□ -2.48
KDM1A-204ENST00000481879 BLMP54132 1417 aaPredicted RBP-0.47□□□□□ -2.48
KDM1A-204ENST00000481879 TCOF1Q13428 1488 aaKnown RBP-0.47□□□□□ -2.48
KDM1A-204ENST00000481879 TRAV12-2A0A075B6T6 113 aa-0.47□□□□□ -2.48
KDM1A-204ENST00000481879 E7EQ34 232 aa-0.47□□□□□ -2.48
KDM1A-204ENST00000481879 PFDN1O60925 122 aa-0.47□□□□□ -2.48
KDM1A-204ENST00000481879 IFNA21P01568 189 aa-0.47□□□□□ -2.48
KDM1A-204ENST00000481879 TCRAP04437 139 aa-0.47□□□□□ -2.48
KDM1A-204ENST00000481879 PPP1R1CQ8WVI7 109 aa-0.47□□□□□ -2.48
KDM1A-204ENST00000481879 WNK1Q9H4A3 2382 aa-0.47□□□□□ -2.49
KDM1A-204ENST00000481879 ESPL1Q14674 2120 aa-0.47□□□□□ -2.49
KDM1A-204ENST00000481879 FASNP49327 2511 aaKnown RBP-0.47□□□□□ -2.49
KDM1A-204ENST00000481879 FLGP20930 4061 aaPredicted RBP-0.48□□□□□ -2.49
KDM1A-204ENST00000481879 WDR87Q6ZQQ6 2873 aa-0.48□□□□□ -2.49
KDM1A-204ENST00000481879 FAM107AO95990 144 aa-0.48□□□□□ -2.49
KDM1A-204ENST00000481879 SLC25A26Q70HW3 274 aa-0.48□□□□□ -2.49
KDM1A-204ENST00000481879 ATPIF1Q9UII2 106 aa-0.48□□□□□ -2.49
KDM1A-204ENST00000481879 A2MP01023 1474 aa-0.48□□□□□ -2.49
KDM1A-204ENST00000481879 PIEZO2Q9H5I5 2752 aa-0.49□□□□□ -2.49
KDM1A-204ENST00000481879 BCORL1Q5H9F3 1711 aa-0.49□□□□□ -2.49
KDM1A-204ENST00000481879 A0A087WTM6 91 aa-0.49□□□□□ -2.49
KDM1A-204ENST00000481879 E5RI56 91 aa-0.49□□□□□ -2.49
KDM1A-204ENST00000481879 CFDP00746 253 aaPredicted RBP-0.49□□□□□ -2.49
KDM1A-204ENST00000481879 SLC25A6P12236 298 aa-0.49□□□□□ -2.49
KDM1A-204ENST00000481879 OR2T2Q6IF00 324 aa-0.49□□□□□ -2.49
KDM1A-204ENST00000481879 PPP1R2P3Q6NXS1 205 aa-0.49□□□□□ -2.49
KDM1A-204ENST00000481879 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.49□□□□□ -2.49
KDM1A-204ENST00000481879 OR9Q1Q8NGQ5 310 aa-0.49□□□□□ -2.49
KDM1A-204ENST00000481879 PPDPFLQ8WWR9 84 aa-0.49□□□□□ -2.49
KDM1A-204ENST00000481879 CDK12Q9NYV4 1490 aaPredicted RBP-0.49□□□□□ -2.49
KDM1A-204ENST00000481879 MYO18BQ8IUG5 2567 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 PKHD1P08F94 4074 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 PNMA8CA0A1B0GUJ8 204 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 TCRBV3S1A0A5B6 114 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 RBAKDNA6NC62 111 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 SPRR2DP22532 72 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 AKR1D1P51857 326 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 HSD17B12Q53GQ0 312 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 SMIM11BQ8TCY0 68 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 IFI27L1Q96BM0 104 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 CCDC115Q96NT0 180 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 VPS25Q9BRG1 176 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 METTL1Q9UBP6 276 aaKnown RBP-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 NDUFAF1Q9Y375 327 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 PTPRGP23470 1445 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 COL12A1Q99715 3063 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 CSMD3Q7Z407 3707 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 TANC1Q9C0D5 1861 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 AKAP6Q13023 2319 aa-0.5□□□□□ -2.49
KDM1A-204ENST00000481879 PKD1L1Q8TDX9 2849 aa-0.51□□□□□ -2.49
KDM1A-204ENST00000481879 PGRMC1O00264 195 aaKnown RBP-0.51□□□□□ -2.49
KDM1A-204ENST00000481879 MT-ND4LP03901 98 aa-0.51□□□□□ -2.49
KDM1A-204ENST00000481879 COX4I1P13073 169 aa-0.51□□□□□ -2.49
KDM1A-204ENST00000481879 PSPHP78330 225 aa-0.51□□□□□ -2.49
KDM1A-204ENST00000481879 PLGLB1Q02325 96 aa-0.51□□□□□ -2.49
KDM1A-204ENST00000481879 AKAP13Q12802 2813 aa-0.51□□□□□ -2.49
KDM1A-204ENST00000481879 TMEM128Q5BJH2 165 aa-0.51□□□□□ -2.49
KDM1A-204ENST00000481879 TMEM35BQ8NCS4 154 aa-0.51□□□□□ -2.49
KDM1A-204ENST00000481879 Q96NJ1 140 aa-0.51□□□□□ -2.49
KDM1A-204ENST00000481879 DNAJC15Q9Y5T4 150 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms