RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 MEIS3P1A6NDR6 274 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 CRYM-AS1A6NIL9 109 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 SNRPGP15A8MWD9 76 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 MPDU1O75352 247 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 EIF3GO75821 320 aaKnown RBP eCLIP1.03□□□□□ -2.24
USH2A-204ENST00000481786 SLC25A5P05141 298 aaKnown RBP1.03□□□□□ -2.24
USH2A-204ENST00000481786 FABP1P07148 127 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 IGKV1-13P0DP09 117 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 GZMBP10144 247 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 RNASE2P10153 161 aaKnown RBP1.03□□□□□ -2.24
USH2A-204ENST00000481786 NFYAP23511 347 aaPredicted RBP1.03□□□□□ -2.24
USH2A-204ENST00000481786 F2RP25116 425 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 PSMA1P25786 263 aaKnown RBP1.03□□□□□ -2.24
USH2A-204ENST00000481786 G6PCP35575 357 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 UBE2AP49459 152 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 RND2P52198 227 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 TSPAN5P62079 268 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 BTN1A1Q13410 526 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 FLOT2Q14254 428 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 SP6Q3SY56 376 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 Q499Y3 187 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 HSD17B12Q53GQ0 312 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 AADACL3Q5VUY0 350 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 C12orf73Q69YU5 71 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 Q6ZQT7 251 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 KRTAP13-1Q8IUC0 172 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 ARRDC1Q8N5I2 433 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 SLC35G3Q8N808 338 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 RNASEH2CQ8TDP1 164 aaKnown RBP1.03□□□□□ -2.24
USH2A-204ENST00000481786 TSKUQ8WUA8 353 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 BORCS5Q969J3 196 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 SIKE1Q9BRV8 207 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 NDFIP1Q9BT67 221 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 LPAR5Q9H1C0 372 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 EFCAB1Q9HAE3 211 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 WFDC1Q9HC57 220 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 NKIRAS1Q9NYS0 192 aa1.03□□□□□ -2.24
USH2A-204ENST00000481786 ANKRD65E5RJM6 399 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 M0R129 80 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 CFDP00746 253 aaPredicted RBP1.02□□□□□ -2.25
USH2A-204ENST00000481786 ANGP03950 147 aaKnown RBP1.02□□□□□ -2.25
USH2A-204ENST00000481786 NMBP08949 121 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 MGST1P10620 155 aaKnown RBP1.02□□□□□ -2.25
USH2A-204ENST00000481786 LGALS3P17931 250 aaKnown RBP1.02□□□□□ -2.25
USH2A-204ENST00000481786 RPL7P18124 248 aaKnown RBP1.02□□□□□ -2.25
USH2A-204ENST00000481786 ORM2P19652 201 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 DTYMKP23919 212 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 HLA-DMAP28067 261 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 TALDO1P37837 337 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 HTR2BP41595 481 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 INPP1P49441 399 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 FGF8P55075 233 aaPredicted RBP1.02□□□□□ -2.25
USH2A-204ENST00000481786 RPL18AQ02543 176 aaKnown RBP1.02□□□□□ -2.25
USH2A-204ENST00000481786 ZNF90Q03938 601 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 BSXQ3C1V8 233 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 PRR9Q5T870 116 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 HACD4Q5VWC8 232 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 RPL22L1Q6P5R6 122 aaKnown RBP1.02□□□□□ -2.25
USH2A-204ENST00000481786 KRTAP26-1Q6PEX3 210 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 CNIH2Q6PI25 160 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 ZNF546Q86UE3 836 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 LINC00304Q8N9R0 145 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 OR2G3Q8NGZ4 309 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 OR51H1Q8NH63 302 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 MAFIPQ8WZ33 124 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 SMIM19Q96E16 107 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 CENPNQ96H22 339 aaPredicted RBP1.02□□□□□ -2.25
USH2A-204ENST00000481786 CIB1Q99828 191 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 SLC50A1Q9BRV3 221 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 PDCD10Q9BUL8 212 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 PARD6GQ9BYG4 376 aaPredicted RBP1.02□□□□□ -2.25
USH2A-204ENST00000481786 SAR1AQ9NR31 198 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 SLC39A9Q9NUM3 307 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 SSR3Q9UNL2 185 aa1.02□□□□□ -2.25
USH2A-204ENST00000481786 FLGP20930 4061 aaPredicted RBP1.01□□□□□ -2.25
USH2A-204ENST00000481786 TRAV8-4A0A0B4J246 113 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 A0A0G2JND7 137 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 PNMA8CA0A1B0GUJ8 204 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 LINC00854A0A1B0GVQ3 168 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 SNTNA6NMZ2 147 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 TMEM262E9PQX1 116 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 M0R2P5 195 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 GNGT2O14610 69 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 WBP4O75554 376 aaKnown RBP1.01□□□□□ -2.25
USH2A-204ENST00000481786 TNFAIP8O95379 198 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 PPYP01298 95 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 P01737 135 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 MT2AP02795 61 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 GPX1P07203 203 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 LINC00694P0DN24 101 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 CXCL2P19875 107 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 MAPK3P27361 379 aaPredicted RBP1.01□□□□□ -2.25
USH2A-204ENST00000481786 RANBP1P43487 201 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 LPAR6P43657 344 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 GTF2A1P52655 376 aaPredicted RBP1.01□□□□□ -2.25
USH2A-204ENST00000481786 RAB2AP61019 212 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 PKIAP61925 76 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 RPS11P62280 158 aaKnown RBP eCLIP1.01□□□□□ -2.25
USH2A-204ENST00000481786 GPR107Q5VW38 600 aa1.01□□□□□ -2.25
USH2A-204ENST00000481786 XAF1Q6GPH4 301 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms