RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 PSG8Q9UQ74 426 aa10.3□□□□□ -0.76
LIMS3-203ENST00000480744 PSCAO43653 123 aa10.29□□□□□ -0.76
LIMS3-203ENST00000480744 ZFP69Q49AA0 526 aa10.29□□□□□ -0.76
LIMS3-203ENST00000480744 PRNTQ86SH4 94 aa10.29□□□□□ -0.76
LIMS3-203ENST00000480744 SLC25A29Q8N8R3 303 aa10.29□□□□□ -0.76
LIMS3-203ENST00000480744 TMEM75Q8N9X5 138 aa10.29□□□□□ -0.76
LIMS3-203ENST00000480744 C11orf21Q9P2W6 132 aa10.29□□□□□ -0.76
LIMS3-203ENST00000480744 IGHV3-38A0A0C4DH36 116 aa10.28□□□□□ -0.76
LIMS3-203ENST00000480744 MAP1LC3B2A6NCE7 125 aa10.28□□□□□ -0.76
LIMS3-203ENST00000480744 RS1O15537 224 aa10.28□□□□□ -0.76
LIMS3-203ENST00000480744 KRTAP10-1P60331 282 aa10.28□□□□□ -0.76
LIMS3-203ENST00000480744 SUMO1P63165 101 aaKnown RBP10.28□□□□□ -0.76
LIMS3-203ENST00000480744 FLI1Q01543 452 aaPredicted RBP10.28□□□□□ -0.76
LIMS3-203ENST00000480744 OR10J3Q5JRS4 329 aa10.28□□□□□ -0.76
LIMS3-203ENST00000480744 CFAP126Q5VTH2 177 aa10.28□□□□□ -0.76
LIMS3-203ENST00000480744 DPPA3Q6W0C5 159 aa10.28□□□□□ -0.76
LIMS3-203ENST00000480744 PRADC1Q9BSG0 188 aa10.28□□□□□ -0.76
LIMS3-203ENST00000480744 MAP1LC3BQ9GZQ8 125 aa10.28□□□□□ -0.76
LIMS3-203ENST00000480744 TRAV8-6A0A0B4J262 113 aa10.27□□□□□ -0.77
LIMS3-203ENST00000480744 PFN1P07737 140 aaKnown RBP10.27□□□□□ -0.77
LIMS3-203ENST00000480744 TPT1P13693 172 aaKnown RBP10.27□□□□□ -0.77
LIMS3-203ENST00000480744 XGP55808 180 aa10.27□□□□□ -0.77
LIMS3-203ENST00000480744 TIRAPP58753 221 aa10.27□□□□□ -0.77
LIMS3-203ENST00000480744 RHOHQ15669 191 aa10.27□□□□□ -0.77
LIMS3-203ENST00000480744 SMUG1Q53HV7 270 aa10.27□□□□□ -0.77
LIMS3-203ENST00000480744 CYB561D1Q8N8Q1 229 aa10.27□□□□□ -0.77
LIMS3-203ENST00000480744 Q9HAA7 133 aa10.27□□□□□ -0.77
LIMS3-203ENST00000480744 TMEM167BQ9NRX6 74 aa10.27□□□□□ -0.77
LIMS3-203ENST00000480744 EPDR1Q9UM22 224 aa10.27□□□□□ -0.77
LIMS3-203ENST00000480744 PGPEP1LA6NFU8 196 aa10.26□□□□□ -0.77
LIMS3-203ENST00000480744 IGLV2-11P01706 119 aa10.26□□□□□ -0.77
LIMS3-203ENST00000480744 IGHV3-30P01768 117 aa10.26□□□□□ -0.77
LIMS3-203ENST00000480744 IGHV3-33P01772 117 aa10.26□□□□□ -0.77
LIMS3-203ENST00000480744 IGHV3-30-3P0DP02 117 aa10.26□□□□□ -0.77
LIMS3-203ENST00000480744 IGHV3-30-5P0DP03 117 aa10.26□□□□□ -0.77
LIMS3-203ENST00000480744 NKX2-5P52952 324 aaPredicted RBP10.26□□□□□ -0.77
LIMS3-203ENST00000480744 UBE2G2P60604 165 aa10.26□□□□□ -0.77
LIMS3-203ENST00000480744 ZNF506Q5JVG8 444 aa10.26□□□□□ -0.77
LIMS3-203ENST00000480744 FAM213BQ8TBF2 198 aa10.26□□□□□ -0.77
LIMS3-203ENST00000480744 C9orf85Q96MD7 179 aa10.26□□□□□ -0.77
LIMS3-203ENST00000480744 TRBV6-4A0A1B0GX49 114 aa10.25□□□□□ -0.77
LIMS3-203ENST00000480744 CIDEAO60543 219 aa10.25□□□□□ -0.77
LIMS3-203ENST00000480744 GCSHP23434 173 aa10.25□□□□□ -0.77
LIMS3-203ENST00000480744 LINC01556Q5JQF7 62 aa10.25□□□□□ -0.77
LIMS3-203ENST00000480744 IGLV5-52A0A0A0MRZ9 124 aa10.24□□□□□ -0.77
LIMS3-203ENST00000480744 A0A1B0GV50 99 aa10.24□□□□□ -0.77
LIMS3-203ENST00000480744 A0A1W2PRE2 83 aa10.24□□□□□ -0.77
LIMS3-203ENST00000480744 FAM74A7A6NL05 159 aa10.24□□□□□ -0.77
LIMS3-203ENST00000480744 UMAD1C9J7I0 102 aa10.24□□□□□ -0.77
LIMS3-203ENST00000480744 EIF5AP63241 154 aaKnown RBP10.24□□□□□ -0.77
LIMS3-203ENST00000480744 SAPCD1Q5SSQ6 148 aa10.24□□□□□ -0.77
LIMS3-203ENST00000480744 MBD3L1Q8WWY6 194 aa10.24□□□□□ -0.77
LIMS3-203ENST00000480744 FRZBQ92765 325 aa10.24□□□□□ -0.77
LIMS3-203ENST00000480744 TRAV34A0A0B4J273 112 aa10.23□□□□□ -0.77
LIMS3-203ENST00000480744 IBA57-AS1B1ANH7 110 aa10.23□□□□□ -0.77
LIMS3-203ENST00000480744 IFNA7P01567 189 aa10.23□□□□□ -0.77
LIMS3-203ENST00000480744 INAFM2P0DMQ5 153 aa10.23□□□□□ -0.77
LIMS3-203ENST00000480744 RNASE3P12724 160 aaKnown RBP10.23□□□□□ -0.77
LIMS3-203ENST00000480744 S100A4P26447 101 aaKnown RBP10.23□□□□□ -0.77
LIMS3-203ENST00000480744 LELP1Q5T871 98 aa10.23□□□□□ -0.77
LIMS3-203ENST00000480744 Q5VSD8 79 aa10.23□□□□□ -0.77
LIMS3-203ENST00000480744 SLC51BQ86UW2 128 aa10.23□□□□□ -0.77
LIMS3-203ENST00000480744 ATP6V0E2Q8NHE4 81 aa10.23□□□□□ -0.77
LIMS3-203ENST00000480744 LINC00479Q96M42 142 aa10.23□□□□□ -0.77
LIMS3-203ENST00000480744 MGST1P10620 155 aaKnown RBP10.22□□□□□ -0.77
LIMS3-203ENST00000480744 HAMPP81172 84 aa10.22□□□□□ -0.77
LIMS3-203ENST00000480744 SFT2D1Q8WV19 159 aa10.22□□□□□ -0.77
LIMS3-203ENST00000480744 GTSF1LQ9H1H1 148 aa10.22□□□□□ -0.77
LIMS3-203ENST00000480744 BOLA1Q9Y3E2 137 aa10.22□□□□□ -0.77
LIMS3-203ENST00000480744 LRCOL1A6NCL2 159 aa10.21□□□□□ -0.77
LIMS3-203ENST00000480744 SMR3BP02814 79 aaPredicted RBP10.21□□□□□ -0.77
LIMS3-203ENST00000480744 ASIPP42127 132 aa10.21□□□□□ -0.77
LIMS3-203ENST00000480744 SULT1A2P50226 295 aa10.21□□□□□ -0.77
LIMS3-203ENST00000480744 PTH2Q96A98 100 aa10.21□□□□□ -0.77
LIMS3-203ENST00000480744 PARLQ9H300 379 aa10.21□□□□□ -0.77
LIMS3-203ENST00000480744 ARL2-SNX15V9GYD0 113 aa10.21□□□□□ -0.77
LIMS3-203ENST00000480744 IGKV3D-20A0A0C4DH25 116 aa10.2□□□□□ -0.78
LIMS3-203ENST00000480744 GAGE12JA6NER3 117 aa10.2□□□□□ -0.78
LIMS3-203ENST00000480744 PEX7O00628 323 aa10.2□□□□□ -0.78
LIMS3-203ENST00000480744 CCL20P78556 96 aa10.2□□□□□ -0.78
LIMS3-203ENST00000480744 GAGE1Q13065 139 aa10.2□□□□□ -0.78
LIMS3-203ENST00000480744 GAGE4Q13068 117 aa10.2□□□□□ -0.78
LIMS3-203ENST00000480744 GAGE5Q13069 117 aa10.2□□□□□ -0.78
LIMS3-203ENST00000480744 FAT1Q14517 4588 aa10.2□□□□□ -0.78
LIMS3-203ENST00000480744 GAGE13Q4V321 117 aa10.2□□□□□ -0.78
LIMS3-203ENST00000480744 Q6ZSN1 163 aa10.2□□□□□ -0.78
LIMS3-203ENST00000480744 FABP5P3A8MUU1 101 aa10.19□□□□□ -0.78
LIMS3-203ENST00000480744 A8MWV9 139 aa10.19□□□□□ -0.78
LIMS3-203ENST00000480744 PAGE4O60829 102 aa10.19□□□□□ -0.78
LIMS3-203ENST00000480744 H2AFB1P0C5Y9 115 aa10.19□□□□□ -0.78
LIMS3-203ENST00000480744 Q86TA4 180 aa10.19□□□□□ -0.78
LIMS3-203ENST00000480744 Q8N814 137 aa10.19□□□□□ -0.78
LIMS3-203ENST00000480744 NTN5Q8WTR8 489 aaPredicted RBP10.19□□□□□ -0.78
LIMS3-203ENST00000480744 B4DEV8 164 aa10.18□□□□□ -0.78
LIMS3-203ENST00000480744 H3BVH4 76 aa10.18□□□□□ -0.78
LIMS3-203ENST00000480744 M0R036 132 aa10.18□□□□□ -0.78
LIMS3-203ENST00000480744 ZFP2Q6ZN57 461 aa10.18□□□□□ -0.78
LIMS3-203ENST00000480744 Q8N3U1 123 aa10.18□□□□□ -0.78
LIMS3-203ENST00000480744 JPT2Q9H910 190 aa10.18□□□□□ -0.78
LIMS3-203ENST00000480744 RAB5CP51148 216 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms