RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 MT1HP80294 61 aa7.01□□□□□ -1.29
USP11-208ENST00000480104 HIGD2BQ4VC39 106 aa7.01□□□□□ -1.29
USP11-208ENST00000480104 MIC13Q5XKP0 118 aa7.01□□□□□ -1.29
USP11-208ENST00000480104 Q6ZRG5 221 aa7.01□□□□□ -1.29
USP11-208ENST00000480104 COMMD3Q9UBI1 195 aa7.01□□□□□ -1.29
USP11-208ENST00000480104 IGLV7-43P04211 117 aa7□□□□□ -1.29
USP11-208ENST00000480104 ANXA3P12429 323 aa7□□□□□ -1.29
USP11-208ENST00000480104 RAB5CP51148 216 aa7□□□□□ -1.29
USP11-208ENST00000480104 C12orf45Q8N5I9 185 aaPredicted RBP7□□□□□ -1.29
USP11-208ENST00000480104 PFDN5Q99471 154 aa7□□□□□ -1.29
USP11-208ENST00000480104 C11orf21Q9P2W6 132 aa7□□□□□ -1.29
USP11-208ENST00000480104 BLOC1S6Q9UL45 172 aa7□□□□□ -1.29
USP11-208ENST00000480104 DISC1C4P0D8 188 aa6.99□□□□□ -1.29
USP11-208ENST00000480104 RPS19P39019 145 aaKnown RBP6.99□□□□□ -1.29
USP11-208ENST00000480104 CSN1S1P47710 185 aa6.99□□□□□ -1.29
USP11-208ENST00000480104 CAMLGP49069 296 aa6.99□□□□□ -1.29
USP11-208ENST00000480104 AQP4P55087 323 aa6.99□□□□□ -1.29
USP11-208ENST00000480104 KRTAP10-6P60371 365 aaPredicted RBP6.99□□□□□ -1.29
USP11-208ENST00000480104 PKIAP61925 76 aa6.99□□□□□ -1.29
USP11-208ENST00000480104 CYCSP99999 105 aaKnown RBP6.99□□□□□ -1.29
USP11-208ENST00000480104 REG3AQ06141 175 aa6.99□□□□□ -1.29
USP11-208ENST00000480104 ARL16Q0P5N6 197 aa6.99□□□□□ -1.29
USP11-208ENST00000480104 LGALSLQ3ZCW2 172 aaPredicted RBP6.99□□□□□ -1.29
USP11-208ENST00000480104 TMEM14EPQ6UXP3 125 aa6.99□□□□□ -1.29
USP11-208ENST00000480104 PHYHIPLQ96FC7 376 aa6.99□□□□□ -1.29
USP11-208ENST00000480104 RABL2BQ9UNT1 228 aa6.99□□□□□ -1.29
USP11-208ENST00000480104 SSSCA1O60232 199 aa6.98□□□□□ -1.29
USP11-208ENST00000480104 RNASE3P12724 160 aaKnown RBP6.98□□□□□ -1.29
USP11-208ENST00000480104 MLST8Q9BVC4 326 aa6.98□□□□□ -1.29
USP11-208ENST00000480104 HPGDSO60760 199 aa6.97□□□□□ -1.29
USP11-208ENST00000480104 NBEAP1P0C6P0 100 aa6.97□□□□□ -1.29
USP11-208ENST00000480104 RPL36AP83881 106 aaKnown RBP6.97□□□□□ -1.29
USP11-208ENST00000480104 GAGE6Q13070 117 aa6.97□□□□□ -1.29
USP11-208ENST00000480104 FAM162BQ5T6X4 162 aa6.97□□□□□ -1.29
USP11-208ENST00000480104 PRR27Q6MZM9 219 aa6.97□□□□□ -1.29
USP11-208ENST00000480104 NRARPQ7Z6K4 114 aa6.97□□□□□ -1.29
USP11-208ENST00000480104 RPL36ALQ969Q0 106 aaKnown RBP6.97□□□□□ -1.29
USP11-208ENST00000480104 TVP23CQ96ET8 276 aa6.97□□□□□ -1.29
USP11-208ENST00000480104 SLC25A2Q9BXI2 301 aa6.97□□□□□ -1.29
USP11-208ENST00000480104 IGLV7-46A0A075B6I9 117 aa6.96□□□□□ -1.3
USP11-208ENST00000480104 TRAV8-4A0A0B4J246 113 aa6.96□□□□□ -1.3
USP11-208ENST00000480104 PIGBOS1A0A0B4J2F0 54 aa6.96□□□□□ -1.3
USP11-208ENST00000480104 RHODO00212 210 aa6.96□□□□□ -1.3
USP11-208ENST00000480104 P01737 135 aa6.96□□□□□ -1.3
USP11-208ENST00000480104 GZMBP10144 247 aa6.96□□□□□ -1.3
USP11-208ENST00000480104 SPCS2Q15005 226 aa6.96□□□□□ -1.3
USP11-208ENST00000480104 FAM74A4Q5TZK3 123 aa6.96□□□□□ -1.3
USP11-208ENST00000480104 DYNC2LI1Q8TCX1 351 aa6.96□□□□□ -1.3
USP11-208ENST00000480104 TMED6Q8WW62 240 aa6.96□□□□□ -1.3
USP11-208ENST00000480104 TRBV7-3A0A075B6L6 115 aa6.95□□□□□ -1.3
USP11-208ENST00000480104 A0A1W2PNN7 141 aa6.95□□□□□ -1.3
USP11-208ENST00000480104 AMTP48728 403 aa6.95□□□□□ -1.3
USP11-208ENST00000480104 S100A10P60903 97 aa6.95□□□□□ -1.3
USP11-208ENST00000480104 CFAP161Q6P656 301 aa6.95□□□□□ -1.3
USP11-208ENST00000480104 DIRAS2Q96HU8 199 aa6.95□□□□□ -1.3
USP11-208ENST00000480104 SMIM8Q96KF7 97 aa6.95□□□□□ -1.3
USP11-208ENST00000480104 PRRT1Q99946 306 aa6.95□□□□□ -1.3
USP11-208ENST00000480104 TREM1Q9NP99 234 aa6.95□□□□□ -1.3
USP11-208ENST00000480104 TRBV10-1A0A0K0K1A3 114 aa6.94□□□□□ -1.3
USP11-208ENST00000480104 RAB2AP61019 212 aa6.94□□□□□ -1.3
USP11-208ENST00000480104 ID3Q02535 119 aa6.94□□□□□ -1.3
USP11-208ENST00000480104 ASB16-AS1Q495Z4 193 aa6.94□□□□□ -1.3
USP11-208ENST00000480104 PIK3CD-AS1Q5SR53 167 aa6.94□□□□□ -1.3
USP11-208ENST00000480104 FAM167A-AS1Q96KT0 104 aa6.94□□□□□ -1.3
USP11-208ENST00000480104 BCL7BQ9BQE9 202 aa6.94□□□□□ -1.3
USP11-208ENST00000480104 RABL2AQ9UBK7 228 aaPredicted RBP6.94□□□□□ -1.3
USP11-208ENST00000480104 PKIGQ9Y2B9 76 aa6.94□□□□□ -1.3
USP11-208ENST00000480104 FAM25AB3EWG3 89 aa6.93□□□□□ -1.3
USP11-208ENST00000480104 FAM25CB3EWG5 89 aa6.93□□□□□ -1.3
USP11-208ENST00000480104 FAM25GB3EWG6 89 aa6.93□□□□□ -1.3
USP11-208ENST00000480104 GABARAPL2P60520 117 aa6.93□□□□□ -1.3
USP11-208ENST00000480104 RANP62826 216 aaKnown RBP6.93□□□□□ -1.3
USP11-208ENST00000480104 GCSAMLQ5JQS6 135 aa6.93□□□□□ -1.3
USP11-208ENST00000480104 PHF5AQ7RTV0 110 aaKnown RBP6.93□□□□□ -1.3
USP11-208ENST00000480104 FXYD5Q96DB9 178 aa6.93□□□□□ -1.3
USP11-208ENST00000480104 GGACTQ9BVM4 153 aa6.93□□□□□ -1.3
USP11-208ENST00000480104 CARHSP1Q9Y2V2 147 aaKnown RBP6.93□□□□□ -1.3
USP11-208ENST00000480104 GVQW2A0A096LPI5 108 aaPredicted RBP6.92□□□□□ -1.3
USP11-208ENST00000480104 ZNF80P51504 273 aaPredicted RBP6.92□□□□□ -1.3
USP11-208ENST00000480104 PTTG1IPP53801 180 aa6.92□□□□□ -1.3
USP11-208ENST00000480104 EIF5AP63241 154 aaKnown RBP6.92□□□□□ -1.3
USP11-208ENST00000480104 NTM-AS1Q6ZSK4 140 aa6.92□□□□□ -1.3
USP11-208ENST00000480104 CLVS1Q8IUQ0 354 aaPredicted RBP6.92□□□□□ -1.3
USP11-208ENST00000480104 CNBD2Q96M20 576 aa6.92□□□□□ -1.3
USP11-208ENST00000480104 SCGB3A2Q96PL1 93 aa6.92□□□□□ -1.3
USP11-208ENST00000480104 GAGE12HA6NDE8 117 aa6.91□□□□□ -1.3
USP11-208ENST00000480104 TSC22D2O75157 780 aa6.91□□□□□ -1.3
USP11-208ENST00000480104 AKAIN1P0CW23 69 aa6.91□□□□□ -1.3
USP11-208ENST00000480104 RPL29P47914 159 aaKnown RBP6.91□□□□□ -1.3
USP11-208ENST00000480104 KRTAP19-2Q3LHN2 52 aa6.91□□□□□ -1.3
USP11-208ENST00000480104 MIR17HGQ75NE6 70 aa6.91□□□□□ -1.3
USP11-208ENST00000480104 C20orf203Q8NBC4 194 aa6.91□□□□□ -1.3
USP11-208ENST00000480104 OR10G8Q8NGN5 311 aa6.91□□□□□ -1.3
USP11-208ENST00000480104 HYLS1Q96M11 299 aa6.91□□□□□ -1.3
USP11-208ENST00000480104 SLIRPQ9GZT3 109 aaKnown RBP6.91□□□□□ -1.3
USP11-208ENST00000480104 MIXL1Q9H2W2 232 aa6.91□□□□□ -1.3
USP11-208ENST00000480104 RPP21Q9H633 154 aaKnown RBP6.91□□□□□ -1.3
USP11-208ENST00000480104 LSM3P62310 102 aaKnown RBP6.9□□□□□ -1.3
USP11-208ENST00000480104 GOLT1AQ6ZVE7 132 aa6.9□□□□□ -1.3
USP11-208ENST00000480104 EXTL2Q9UBQ6 330 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms