RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 RNASE3P12724 160 aaKnown RBP8.42□□□□□ -1.06
TRAPPC12-219ENST00000479955 FOXA3P55318 350 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC12-219ENST00000479955 CACNG7P62955 275 aa8.42□□□□□ -1.06
TRAPPC12-219ENST00000479955 RHEBQ15382 184 aa8.42□□□□□ -1.06
TRAPPC12-219ENST00000479955 RNF212Q495C1 297 aa8.42□□□□□ -1.06
TRAPPC12-219ENST00000479955 FAM222AQ5U5X8 452 aa8.42□□□□□ -1.06
TRAPPC12-219ENST00000479955 WDR73Q6P4I2 378 aa8.42□□□□□ -1.06
TRAPPC12-219ENST00000479955 CLRN3Q8NCR9 226 aa8.42□□□□□ -1.06
TRAPPC12-219ENST00000479955 IL17DQ8TAD2 202 aa8.42□□□□□ -1.06
TRAPPC12-219ENST00000479955 C11orf45Q8TAV5 145 aa8.42□□□□□ -1.06
TRAPPC12-219ENST00000479955 RASL10AQ92737 203 aa8.42□□□□□ -1.06
TRAPPC12-219ENST00000479955 BORCS7Q96B45 105 aa8.42□□□□□ -1.06
TRAPPC12-219ENST00000479955 SCRT2Q9NQ03 307 aa8.42□□□□□ -1.06
TRAPPC12-219ENST00000479955 V9GYV3 84 aa8.42□□□□□ -1.06
TRAPPC12-219ENST00000479955 FBN3Q75N90 2809 aa8.42□□□□□ -1.06
TRAPPC12-219ENST00000479955 SNAI2O43623 268 aa8.41□□□□□ -1.06
TRAPPC12-219ENST00000479955 IGLC6P0CF74 106 aa8.41□□□□□ -1.06
TRAPPC12-219ENST00000479955 ZNF876PQ49A33 203 aa8.41□□□□□ -1.06
TRAPPC12-219ENST00000479955 ZNF575Q86XF7 245 aa8.41□□□□□ -1.06
TRAPPC12-219ENST00000479955 ZFP82Q8N141 532 aa8.41□□□□□ -1.06
TRAPPC12-219ENST00000479955 TMEM242Q9NWH2 141 aa8.41□□□□□ -1.06
TRAPPC12-219ENST00000479955 NAT8BQ9UHF3 227 aa8.41□□□□□ -1.06
TRAPPC12-219ENST00000479955 A0A087WWC5 75 aa8.4□□□□□ -1.06
TRAPPC12-219ENST00000479955 TRGV1A0A0A0MS02 117 aa8.4□□□□□ -1.06
TRAPPC12-219ENST00000479955 C7orf77A4D0Y5 90 aa8.4□□□□□ -1.06
TRAPPC12-219ENST00000479955 CIDEAO60543 219 aa8.4□□□□□ -1.06
TRAPPC12-219ENST00000479955 GZMBP10144 247 aa8.4□□□□□ -1.06
TRAPPC12-219ENST00000479955 DAD1P61803 113 aa8.4□□□□□ -1.06
TRAPPC12-219ENST00000479955 SPANXN1Q5VSR9 72 aa8.4□□□□□ -1.06
TRAPPC12-219ENST00000479955 C18orf15Q96N68 181 aa8.4□□□□□ -1.06
TRAPPC12-219ENST00000479955 IMMP2LQ96T52 175 aa8.4□□□□□ -1.06
TRAPPC12-219ENST00000479955 TPPP3Q9BW30 176 aa8.4□□□□□ -1.06
TRAPPC12-219ENST00000479955 TRGV2A0A075B6R0 118 aa8.39□□□□□ -1.07
TRAPPC12-219ENST00000479955 SMIM27A0A1W2PRY6 76 aa8.39□□□□□ -1.07
TRAPPC12-219ENST00000479955 A8MWV9 139 aa8.39□□□□□ -1.07
TRAPPC12-219ENST00000479955 DEFB130BP0DP73 79 aa8.39□□□□□ -1.07
TRAPPC12-219ENST00000479955 DEFB130AP0DP74 79 aa8.39□□□□□ -1.07
TRAPPC12-219ENST00000479955 CTRLP40313 264 aa8.39□□□□□ -1.07
TRAPPC12-219ENST00000479955 LYZL1Q6UWQ5 148 aa8.39□□□□□ -1.07
TRAPPC12-219ENST00000479955 LINC00612Q8N6U2 182 aa8.39□□□□□ -1.07
TRAPPC12-219ENST00000479955 GTSF1Q8WW33 167 aa8.39□□□□□ -1.07
TRAPPC12-219ENST00000479955 EDA2RQ9HAV5 297 aa8.39□□□□□ -1.07
TRAPPC12-219ENST00000479955 RPS10P5Q9NQ39 176 aa8.39□□□□□ -1.07
TRAPPC12-219ENST00000479955 IGHV4-4A0A075B6R2 117 aa8.38□□□□□ -1.07
TRAPPC12-219ENST00000479955 GAGE12BA1L429 117 aa8.38□□□□□ -1.07
TRAPPC12-219ENST00000479955 HIGD1CA8MV81 97 aa8.38□□□□□ -1.07
TRAPPC12-219ENST00000479955 M0R381 172 aa8.38□□□□□ -1.07
TRAPPC12-219ENST00000479955 GAGE7O76087 117 aa8.38□□□□□ -1.07
TRAPPC12-219ENST00000479955 GAGE12FP0CL80 117 aa8.38□□□□□ -1.07
TRAPPC12-219ENST00000479955 GAGE12GP0CL81 117 aa8.38□□□□□ -1.07
TRAPPC12-219ENST00000479955 GAGE12IP0CL82 117 aa8.38□□□□□ -1.07
TRAPPC12-219ENST00000479955 S100PP25815 95 aa8.38□□□□□ -1.07
TRAPPC12-219ENST00000479955 KCNIP4Q6PIL6 250 aa8.38□□□□□ -1.07
TRAPPC12-219ENST00000479955 Q6ZTI0 123 aa8.38□□□□□ -1.07
TRAPPC12-219ENST00000479955 CNFNQ9BYD5 112 aa8.38□□□□□ -1.07
TRAPPC12-219ENST00000479955 MRPL16Q9NX20 251 aaKnown RBP8.38□□□□□ -1.07
TRAPPC12-219ENST00000479955 A0A1B0GUT8 65 aa8.37□□□□□ -1.07
TRAPPC12-219ENST00000479955 NXPH4O95158 308 aa8.37□□□□□ -1.07
TRAPPC12-219ENST00000479955 ATP5G1P05496 136 aa8.37□□□□□ -1.07
TRAPPC12-219ENST00000479955 RIGQ13278 110 aa8.37□□□□□ -1.07
TRAPPC12-219ENST00000479955 DMRTA1Q5VZB9 504 aa8.37□□□□□ -1.07
TRAPPC12-219ENST00000479955 SMIM15Q7Z3B0 74 aa8.37□□□□□ -1.07
TRAPPC12-219ENST00000479955 NUP35Q8NFH5 326 aa8.37□□□□□ -1.07
TRAPPC12-219ENST00000479955 OR4C5Q8NGB2 326 aa8.37□□□□□ -1.07
TRAPPC12-219ENST00000479955 OR10AG1Q8NH19 301 aa8.37□□□□□ -1.07
TRAPPC12-219ENST00000479955 PGLYRP4Q96LB8 373 aa8.37□□□□□ -1.07
TRAPPC12-219ENST00000479955 CELA1Q9UNI1 258 aa8.37□□□□□ -1.07
TRAPPC12-219ENST00000479955 TRAV4A0A0B4J268 109 aa8.36□□□□□ -1.07
TRAPPC12-219ENST00000479955 A0A1B0GW15 77 aa8.36□□□□□ -1.07
TRAPPC12-219ENST00000479955 S100A8P05109 93 aa8.36□□□□□ -1.07
TRAPPC12-219ENST00000479955 TRGC1P0CF51 173 aa8.36□□□□□ -1.07
TRAPPC12-219ENST00000479955 SMIM17P0DL12 118 aa8.36□□□□□ -1.07
TRAPPC12-219ENST00000479955 NTF3P20783 257 aa8.36□□□□□ -1.07
TRAPPC12-219ENST00000479955 S100A1P23297 94 aa8.36□□□□□ -1.07
TRAPPC12-219ENST00000479955 TWIST1Q15672 202 aa8.36□□□□□ -1.07
TRAPPC12-219ENST00000479955 C12orf74Q32Q52 190 aa8.36□□□□□ -1.07
TRAPPC12-219ENST00000479955 BTF3L4Q96K17 158 aa8.36□□□□□ -1.07
TRAPPC12-219ENST00000479955 TRAV9-1A0A075B6T8 112 aa8.35□□□□□ -1.07
TRAPPC12-219ENST00000479955 RHODO00212 210 aa8.35□□□□□ -1.07
TRAPPC12-219ENST00000479955 RS1O15537 224 aa8.35□□□□□ -1.07
TRAPPC12-219ENST00000479955 NANOS2P60321 138 aaKnown RBP8.35□□□□□ -1.07
TRAPPC12-219ENST00000479955 SLAQ13239 276 aa8.35□□□□□ -1.07
TRAPPC12-219ENST00000479955 ZFP2Q6ZN57 461 aa8.35□□□□□ -1.07
TRAPPC12-219ENST00000479955 AP1S3Q96PC3 154 aa8.35□□□□□ -1.07
TRAPPC12-219ENST00000479955 DNAH9Q9NYC9 4486 aa8.35□□□□□ -1.07
TRAPPC12-219ENST00000479955 COL7A1Q02388 2944 aa8.34□□□□□ -1.07
TRAPPC12-219ENST00000479955 MUC4Q99102 2169 aa8.34□□□□□ -1.07
TRAPPC12-219ENST00000479955 TRAV10A0A0B4J240 114 aa8.34□□□□□ -1.07
TRAPPC12-219ENST00000479955 MUC21A0A0G2JKD1 596 aa8.34□□□□□ -1.07
TRAPPC12-219ENST00000479955 MUC21A0A140T8X8 626 aa8.34□□□□□ -1.07
TRAPPC12-219ENST00000479955 SSTP61278 116 aa8.34□□□□□ -1.07
TRAPPC12-219ENST00000479955 CFAP126Q5VTH2 177 aa8.34□□□□□ -1.07
TRAPPC12-219ENST00000479955 ATP5L2Q7Z4Y8 100 aa8.34□□□□□ -1.07
TRAPPC12-219ENST00000479955 WWC2-AS2Q96NR7 200 aa8.34□□□□□ -1.07
TRAPPC12-219ENST00000479955 TRGV4A0A0C4DH28 118 aa8.33□□□□□ -1.08
TRAPPC12-219ENST00000479955 FAM3BP58499 235 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC12-219ENST00000479955 Q6ZTC4 211 aa8.33□□□□□ -1.08
TRAPPC12-219ENST00000479955 PRKDCP78527 4128 aaKnown RBP8.32□□□□□ -1.08
TRAPPC12-219ENST00000479955 HUWE1Q7Z6Z7 4374 aaKnown RBP8.32□□□□□ -1.08
TRAPPC12-219ENST00000479955 DEFB131BA0A096LNP1 70 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms